This distribution has been tested as part of the cpan-testers effort to test as many new uploads to CPAN as possible. See http://testers.cpan.org/
Please cc any replies to [email protected] to keep other test volunteers informed and to prevent any duplicate effort. -- Dear Christopher Jones, This is a computer-generated report for TRL-Microarray-0.06 on perl-5.8.8, created automatically by CPAN-Reporter-1.02 and sent to the CPAN Testers mailing list. If you have received this email directly, it is because the person testing your distribution chose to send a copy to your CPAN email address; there may be a delay before the official report is received and processed by CPAN Testers. Thank you for uploading your work to CPAN. However, it appears that there were some problems with your distribution. If these results are not what you expect, please consult "Notes for CPAN Authors" on the CPAN Testers Wiki: http://cpantest.grango.org Sections of this report: * Tester comments * Program output * Prerequisites * Environment and other context ------------------------------ TESTER COMMENTS ------------------------------ Additional comments from tester: [none provided] ------------------------------ PROGRAM OUTPUT ------------------------------ Output from '/usr/bin/make test': PERL_DL_NONLAZY=1 /home/david/_/_/perl-5.8.8/bin/perl "-MExtUtils::Command::MM" "-e" "test_harness(0, 'blib/lib', 'blib/arch')" t/*.t t/TRL-Microarray-Microarray_File-BlueFuse...... # Failed test 'use TRL::Microarray::Microarray_File::BlueFuse;' # at t/TRL-Microarray-Microarray_File-BlueFuse.t line 12. # Tried to use 'TRL::Microarray::Microarray_File::BlueFuse'. # Error: Can't locate TRL/ArrayPipeLine/Pipeline_BAC.pm in @INC (@INC contains: /home/david/_/_/perl-5.8.8/.cpan/build/TRL-Microarray-0.06-1mVIL1/blib/lib /home/david/_/_/perl-5.8.8/.cpan/build/TRL-Microarray-0.06-1mVIL1/blib/arch /home/david/cpantesting/perl-5.8.8/lib/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/5.8.8 /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8 /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8 /home/david/cpantesting/perl-5.8.8/lib/site_perl . /home/david/cpantesting/perl-5.8.8/lib/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/5.8.8 /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8 /home/david/cpantesting/perl-5.8.8/lib/site_perl .) at /home/david/_/_/perl-5.8.8/.cpan/build/TRL-Microarray-0.06-1mVIL1/blib/lib/TRL/Microarray/Feature.pm line 186. # Compilation failed in require at /home/david/_/_/perl-5.8.8/.cpan/build/TRL-Microarray-0.06-1mVIL1/blib/lib/TRL/Microarray.pm line 11. # BEGIN failed--compilation aborted at t/TRL-Microarray-Microarray_File-BlueFuse.t line 12. # Compilation failed in require at /home/david/_/_/perl-5.8.8/.cpan/build/TRL-Microarray-0.06-1mVIL1/blib/lib/TRL/Microarray/Spot.pm line 8. # Compilation failed in require at /home/david/_/_/perl-5.8.8/.cpan/build/TRL-Microarray-0.06-1mVIL1/blib/lib/TRL/Microarray/Microarray_File/Data_File.pm line 11. # Compilation failed in require at /home/david/_/_/perl-5.8.8/.cpan/build/TRL-Microarray-0.06-1mVIL1/blib/lib/TRL/Microarray/Microarray_File/BlueFuse.pm line 12. # Compilation failed in require at (eval 9) line 2. # BEGIN failed--compilation aborted at (eval 9) line 2. # Looks like you failed 1 test of 6. dubious Test returned status 1 (wstat 256, 0x100) DIED. FAILED test 1 Failed 1/6 tests, 83.33% okay (less 5 skipped tests: 0 okay, 0.00%) t/TRL-Microarray-Microarray_File-Data_File..... # Failed test 'use TRL::Microarray::Microarray_File::Data_File;' # at t/TRL-Microarray-Microarray_File-Data_File.t line 12. # Tried to use 'TRL::Microarray::Microarray_File::Data_File'. # Error: Can't locate TRL/ArrayPipeLine/Pipeline_BAC.pm in @INC (@INC contains: /home/david/_/_/perl-5.8.8/.cpan/build/TRL-Microarray-0.06-1mVIL1/blib/lib /home/david/_/_/perl-5.8.8/.cpan/build/TRL-Microarray-0.06-1mVIL1/blib/arch /home/david/cpantesting/perl-5.8.8/lib/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/5.8.8 /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8 /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8 /home/david/cpantesting/perl-5.8.8/lib/site_perl . /home/david/cpantesting/perl-5.8.8/lib/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/5.8.8 /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8 /home/david/cpantesting/perl-5.8.8/lib/site_perl .) at /home/david/_/_/perl-5.8.8/.cpan/build/TRL-Microarray-0.06-1mVIL1/blib/lib/TRL/Microarray/Feature.pm line 186. # Compilation failed in require at /home/david/_/_/perl-5.8.8/.cpan/build/TRL-Microarray-0.06-1mVIL1/blib/lib/TRL/Microarray.pm line 11. # BEGIN failed--compilation aborted at t/TRL-Microarray-Microarray_File-Data_File.t line 12. # Compilation failed in require at /home/david/_/_/perl-5.8.8/.cpan/build/TRL-Microarray-0.06-1mVIL1/blib/lib/TRL/Microarray/Spot.pm line 8. # Compilation failed in require at /home/david/_/_/perl-5.8.8/.cpan/build/TRL-Microarray-0.06-1mVIL1/blib/lib/TRL/Microarray/Microarray_File/Data_File.pm line 11. # Compilation failed in require at (eval 9) line 2. # BEGIN failed--compilation aborted at (eval 9) line 2. # Looks like you failed 1 test of 5. dubious Test returned status 1 (wstat 256, 0x100) DIED. FAILED test 1 Failed 1/5 tests, 80.00% okay (less 4 skipped tests: 0 okay, 0.00%) t/TRL-Microarray-Microarray_File-GAL_File...... # Failed test 'use TRL::Microarray::Microarray_File::Gal_File;' # at t/TRL-Microarray-Microarray_File-GAL_File.t line 12. # Tried to use 'TRL::Microarray::Microarray_File::Gal_File'. # Error: Can't locate TRL/Microarray/Microarray_File/Gal_File.pm in @INC (@INC contains: /home/david/_/_/perl-5.8.8/.cpan/build/TRL-Microarray-0.06-1mVIL1/blib/lib /home/david/_/_/perl-5.8.8/.cpan/build/TRL-Microarray-0.06-1mVIL1/blib/arch /home/david/cpantesting/perl-5.8.8/lib/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/5.8.8 /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8 /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8 /home/david/cpantesting/perl-5.8.8/lib/site_perl . /home/david/cpantesting/perl-5.8.8/lib/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/5.8.8 /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8 /home/david/cpantesting/perl-5.8.8/lib/site_perl .) at (eval 7) line 2. # BEGIN failed--compilation aborted at t/TRL-Microarray-Microarray_File-GAL_File.t line 12. # Looks like you failed 1 test of 8. dubious Test returned status 1 (wstat 256, 0x100) DIED. FAILED test 1 Failed 1/8 tests, 87.50% okay (less 7 skipped tests: 0 okay, 0.00%) t/TRL-Microarray-Microarray_File-Quantarray.... # Failed test 'use TRL::Microarray::Microarray_File::Quantarray;' # at t/TRL-Microarray-Microarray_File-Quantarray.t line 12. # Tried to use 'TRL::Microarray::Microarray_File::Quantarray'. # Error: Can't locate TRL/ArrayPipeLine/Pipeline_BAC.pm in @INC (@INC contains: /home/david/_/_/perl-5.8.8/.cpan/build/TRL-Microarray-0.06-1mVIL1/blib/lib /home/david/_/_/perl-5.8.8/.cpan/build/TRL-Microarray-0.06-1mVIL1/blib/arch /home/david/cpantesting/perl-5.8.8/lib/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/5.8.8 /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8 /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8 /home/david/cpantesting/perl-5.8.8/lib/site_perl . /home/david/cpantesting/perl-5.8.8/lib/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/5.8.8 /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8 /home/david/cpantesting/perl-5.8.8/lib/site_perl .) at /home/david/_/_/perl-5.8.8/.cpan/build/TRL-Microarray-0.06-1mVIL1/blib/lib/TRL/Microarray/Feature.pm line 186. # Compilation failed in require at /home/david/_/_/perl-5.8.8/.cpan/build/TRL-Microarray-0.06-1mVIL1/blib/lib/TRL/Microarray.pm line 11. # BEGIN failed--compilation aborted at t/TRL-Microarray-Microarray_File-Quantarray.t line 12. # Compilation failed in require at /home/david/_/_/perl-5.8.8/.cpan/build/TRL-Microarray-0.06-1mVIL1/blib/lib/TRL/Microarray/Spot.pm line 8. # Compilation failed in require at /home/david/_/_/perl-5.8.8/.cpan/build/TRL-Microarray-0.06-1mVIL1/blib/lib/TRL/Microarray/Microarray_File/Data_File.pm line 11. # Compilation failed in require at /home/david/_/_/perl-5.8.8/.cpan/build/TRL-Microarray-0.06-1mVIL1/blib/lib/TRL/Microarray/Microarray_File/Quantarray.pm line 12. # Compilation failed in require at (eval 9) line 2. # BEGIN failed--compilation aborted at (eval 9) line 2. # Looks like you failed 1 test of 7. dubious Test returned status 1 (wstat 256, 0x100) DIED. FAILED test 1 Failed 1/7 tests, 85.71% okay (less 6 skipped tests: 0 okay, 0.00%) t/TRL-Microarray............................... # Failed test 'use TRL::Microarray;' # at t/TRL-Microarray.t line 7. # Tried to use 'TRL::Microarray'. # Error: Can't locate TRL/ArrayPipeLine/Pipeline_BAC.pm in @INC (@INC contains: /home/david/_/_/perl-5.8.8/.cpan/build/TRL-Microarray-0.06-1mVIL1/blib/lib /home/david/_/_/perl-5.8.8/.cpan/build/TRL-Microarray-0.06-1mVIL1/blib/arch /home/david/cpantesting/perl-5.8.8/lib/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/5.8.8 /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8 /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8 /home/david/cpantesting/perl-5.8.8/lib/site_perl . /home/david/cpantesting/perl-5.8.8/lib/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/5.8.8 /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8 /home/david/cpantesting/perl-5.8.8/lib/site_perl .) at /home/david/_/_/perl-5.8.8/.cpan/build/TRL-Microarray-0.06-1mVIL1/blib/lib/TRL/Microarray/Feature.pm line 186. # Compilation failed in require at /home/david/_/_/perl-5.8.8/.cpan/build/TRL-Microarray-0.06-1mVIL1/blib/lib/TRL/Microarray.pm line 11. # BEGIN failed--compilation aborted at t/TRL-Microarray.t line 7. # Compilation failed in require at (eval 3) line 2. # BEGIN failed--compilation aborted at (eval 3) line 2. # Failed test 'use TRL::Microarray::Image;' # at t/TRL-Microarray.t line 10. # Tried to use 'TRL::Microarray::Image'. # Error: Can't locate TRL/ArrayPipeLine.pm in @INC (@INC contains: /home/david/_/_/perl-5.8.8/.cpan/build/TRL-Microarray-0.06-1mVIL1/blib/lib /home/david/_/_/perl-5.8.8/.cpan/build/TRL-Microarray-0.06-1mVIL1/blib/arch /home/david/cpantesting/perl-5.8.8/lib/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/5.8.8 /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8 /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8 /home/david/cpantesting/perl-5.8.8/lib/site_perl . /home/david/cpantesting/perl-5.8.8/lib/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/5.8.8 /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8/i686-linux /home/david/cpantesting/perl-5.8.8/lib/site_perl/5.8.8 /home/david/cpantesting/perl-5.8.8/lib/site_perl .) at /home/david/_/_/perl-5.8.8/.cpan/build/TRL-Microarray-0.06-1mVIL1/blib/lib/TRL/Microarray/Image.pm line 746. # BEGIN failed--compilation aborted at t/TRL-Microarray.t line 10. # Compilation failed in require at (eval 6) line 2. # BEGIN failed--compilation aborted at (eval 6) line 2. # Looks like you failed 2 tests of 6. dubious Test returned status 2 (wstat 512, 0x200) DIED. FAILED tests 1, 4 Failed 2/6 tests, 66.67% okay Failed Test Stat Wstat Total Fail List of Failed ------------------------------------------------------------------------------- t/TRL-Microarray-Microarray_File-BlueFuse 1 256 6 1 1 t/TRL-Microarray-Microarray_File-Data_Fil 1 256 5 1 1 t/TRL-Microarray-Microarray_File-GAL_File 1 256 8 1 1 t/TRL-Microarray-Microarray_File-Quantarr 1 256 7 1 1 t/TRL-Microarray.t 2 512 6 2 1 4 22 subtests skipped. Failed 5/5 test scripts. 6/32 subtests failed. Files=5, Tests=32, 5 wallclock secs ( 0.74 cusr + 0.19 csys = 0.93 CPU) Failed 5/5 test programs. 6/32 subtests failed. make: *** [test_dynamic] Error 2 ------------------------------ PREREQUISITES ------------------------------ Prerequisite modules loaded: requires: Module Need Have ----------------------- ----- ----- GD 2.32 2.35 GD::Image 2.27 2.27 Image::ExifTool 6.66 7.00 Statistics::Descriptive 2.6 2.6 Test::Deep 0.096 0.098 Test::Differences 0.47 0.47 Test::Group 0.07 0.07 Test::More 0.64 0.70 ------------------------------ ENVIRONMENT AND OTHER CONTEXT ------------------------------ Environment variables: LANG = en_GB LANGUAGE = en_GB:en_US:en_GB:en PATH = /usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/games PERL5LIB = PERL5_CPANPLUS_IS_RUNNING = 17936 PERL5_CPAN_IS_RUNNING = 17936 SHELL = /bin/bash TERM = screen Perl special variables (and OS-specific diagnostics, for MSWin32): $^X = /home/david/_/_/perl-5.8.8/bin/perl $UID/$EUID = 1000 / 1000 $GID = 1000 46 44 29 25 24 20 1000 $EGID = 1000 46 44 29 25 24 20 1000 Perl module toolchain versions installed: Module Have ------------------- ------ CPAN 1.9203 Cwd 3.24 ExtUtils::CBuilder n/a ExtUtils::Command 1.13 ExtUtils::Install 1.41 ExtUtils::MakeMaker 6.36 ExtUtils::Manifest 1.51 ExtUtils::ParseXS n/a File::Spec 3.12 Module::Build 0.2808 Module::Signature n/a Test::Harness 2.64 Test::More 0.70 YAML n/a YAML::Syck n/a version 0.7203 -- Summary of my perl5 (revision 5 version 8 subversion 8) configuration: Platform: osname=linux, osvers=2.4.27-3-686, archname=i686-linux uname='linux pigsty 2.4.27-3-686 #1 tue dec 5 21:03:54 utc 2006 i686 gnulinux ' config_args='-de -Dprefix=/home/david/cpantesting/perl-5.8.8' hint=recommended, useposix=true, d_sigaction=define usethreads=undef use5005threads=undef useithreads=undef usemultiplicity=undef useperlio=define d_sfio=undef uselargefiles=define usesocks=undef use64bitint=undef use64bitall=undef uselongdouble=undef usemymalloc=n, bincompat5005=undef Compiler: cc='cc', ccflags ='-fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64', optimize='-O2', cppflags='-fno-strict-aliasing -pipe -I/usr/local/include' ccversion='', gccversion='3.3.5 (Debian 1:3.3.5-13)', gccosandvers='' intsize=4, longsize=4, ptrsize=4, doublesize=8, byteorder=1234 d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=12 ivtype='long', ivsize=4, nvtype='double', nvsize=8, Off_t='off_t', lseeksize=8 alignbytes=4, prototype=define Linker and Libraries: ld='cc', ldflags =' -L/usr/local/lib' libpth=/usr/local/lib /lib /usr/lib libs=-lnsl -lgdbm -ldl -lm -lcrypt -lutil -lc perllibs=-lnsl -ldl -lm -lcrypt -lutil -lc libc=/lib/libc-2.3.2.so, so=so, useshrplib=false, libperl=libperl.a gnulibc_version='2.3.2' Dynamic Linking: dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags='-Wl,-E' cccdlflags='-fpic', lddlflags='-shared -L/usr/local/lib'
