Please ignore. It was a configuration issue with Jenkins. The "lastest" version option of Maven was not the latest Maven 3 on the solaris machines. Updated to use only Maven 3 and above now. Builds fine since #4 now https://builds.apache.org/job/ctakes-trunk-package/4/console
-----Original Message----- From: Apache Jenkins Server [mailto:[email protected]] Sent: Thursday, October 25, 2012 9:35 PM To: [email protected]; [email protected]; Miller, Timothy Subject: Build failed in Jenkins: ctakes-trunk-package #2 See <https://builds.apache.org/job/ctakes-trunk-package/2/changes> Changes: [tmill] Added a few more utility methods to AnnotationTreeUtils. Made a parameter use a public static string key so it can be invoked from uimafit. [tmill] Added isLeaf() utility method. Changed to escape parens. [chenpei] CTAKES-28 - UMLS username and password could be passed in as a system property or env variable. -Added a simple util class called EnvironmentVariable .getEnv(name) will attempt to read the variables from system properties, environment variable, then context. -Renamed variable name to ctakes.umlsuser and ctakes.umlspw to avoid any potential clashes in the future. -Updated any references that used to use those parameters. -Added a note to the startup scripts and README for users Feel free to use this/edit consolidated mechanism so it will be easier for maintenance if we decide to change things. [tmill] Added type system import to chunker descriptor so eclipse viewer doesn't give errors. Also fixed indentation. [chenpei] CTAKES-89 - During assembly copy the resources from src/main/resources to a resources directory which could then be added to the classpath during runtime scripts. exclude them in the jars for now since things like lucene can't read them from a jar anyway. This is a non issue for eclipse ide development since maven automatically copies them to target and is in the classpath anyway. ------------------------------------------ [...truncated 1991 lines...] A ctakes-chunker/src/test/resources/data/output/text1.txt.included.xml AU ctakes-chunker/src/test/resources/data/unit-test-model.bin.gz A ctakes-chunker/src/test/resources/data/unit-test.opennlp.chunks A ctakes-chunker/src/test/resources/data/text-files A ctakes-chunker/src/test/resources/data/text-files/text1.txt A ctakes-chunker/src/test/resources/data/unit-test-tag-dictionary.txt AU ctakes-chunker/src/test/resources/data/unit-test.postagger.model.bin.gz A ctakes-chunker/src/test/resources/data/README A ctakes-chunker/src/main A ctakes-chunker/src/main/java A ctakes-chunker/src/main/java/org A ctakes-chunker/src/main/java/org/apache A ctakes-chunker/src/main/java/org/apache/ctakes A ctakes-chunker/src/main/java/org/apache/ctakes/chunker A 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ctakes-utils/src/main/java/org/apache/ctakes/utils/xcas_comparison/XcasAnnotation.java A ctakes-utils/src/main/java/org/apache/ctakes/utils/xcas_comparison/ConvertAndCompare.java A ctakes-utils/src/main/java/org/apache/ctakes/utils/xcas_comparison/XcasFile.java A ctakes-utils/src/main/java/org/apache/ctakes/utils/xcas_comparison/XcasProcessor.java A ctakes-utils/pom.xml A ctakes-utils/.settings AU ctakes-utils/.settings/org.eclipse.jdt.core.prefs AU ctakes-utils/.settings/org.eclipse.core.resources.prefs A ctakes-type-system A ctakes-type-system/.classpath A ctakes-type-system/META-INF A ctakes-type-system/META-INF/MANIFEST.MF A ctakes-type-system/metadata A ctakes-type-system/metadata/install.xml A ctakes-type-system/.project A ctakes-type-system/doc AU ctakes-type-system/doc/CommonTypeSystem-Full.asta AU ctakes-type-system/doc/CommonTypeSystem.asta A ctakes-type-system/src A ctakes-type-system/src/main A ctakes-type-system/src/main/java A ctakes-type-system/src/main/java/org A ctakes-type-system/src/main/java/org/chboston A ctakes-type-system/src/main/java/org/apache A ctakes-type-system/src/main/java/org/apache/ctakes A ctakes-type-system/src/main/java/org/apache/ctakes/typesystem A ctakes-type-system/src/main/java/org/apache/ctakes/typesystem/kernel A ctakes-type-system/src/main/java/org/apache/ctakes/typesystem/kernel/Kernel.java A ctakes-type-system/src/main/java/org/apache/ctakes/typesystem/kernel/PolyKernel.java A ctakes-type-system/src/main/java/org/apache/ctakes/typesystem/kernel/RBFKernel.java A ctakes-type-system/src/main/java/org/apache/ctakes/typesystem/kernel/LinearKernel.java A ctakes-type-system/src/main/java/org/apache/ctakes/typesystem/type A ctakes-type-system/src/main/java/org/apache/ctakes/typesystem/type/constants A ctakes-type-system/src/main/java/org/apache/ctakes/typesystem/type/constants/CONST.java A ctakes-type-system/src/main/java/org/apache/ctakes/typesystem/util A ctakes-type-system/src/main/java/org/apache/ctakes/typesystem/util/FragmentUtils.java A ctakes-type-system/src/main/java/org/apache/ctakes/typesystem/util/SimpleTree.java A ctakes-type-system/src/main/java/edu A ctakes-type-system/src/main/java/edu/mayo A ctakes-type-system/src/main/java/edu/mayo/bmi A ctakes-type-system/src/main/java/edu/mayo/bmi/uima A ctakes-type-system/src/main/java/edu/mayo/bmi/uima/core A ctakes-type-system/src/main/java/edu/mayo/bmi/uima/core/type A ctakes-type-system/src/main/resources A ctakes-type-system/src/main/resources/META-INF A ctakes-type-system/src/main/resources/META-INF/org.uimafit A ctakes-type-system/src/main/resources/META-INF/org.uimafit/types.txt A ctakes-type-system/src/main/resources/org A ctakes-type-system/src/main/resources/org/apache A ctakes-type-system/src/main/resources/org/apache/ctakes A ctakes-type-system/src/main/resources/org/apache/ctakes/typesystem A ctakes-type-system/src/main/resources/org/apache/ctakes/typesystem/types A ctakes-type-system/src/main/resources/org/apache/ctakes/typesystem/types/TypeSystem.xml A ctakes-type-system/pom.xml A ctakes-type-system/.settings AU ctakes-type-system/.settings/org.eclipse.jdt.core.prefs AU ctakes-type-system/.settings/org.eclipse.core.resources.prefs A ctakes-type-system/desc At revision 1402357 Parsing POMs Downloaded artifact http://repo.maven.apache.org/maven2//org/cleartk/cleartk-release/1.2.0/cleartk-release-1.2.0.pom Downloaded artifact http://repo.maven.apache.org/maven2//org/cleartk/cleartk-parent/1.2.0/cleartk-parent-1.2.0.pom [ctakes-trunk-package] $ /home/hudson/tools/java/latest1.6/bin/java -cp /export/home/hudson/hudson-slave/maven-agent.jar:/export/home/hudson/hudson-slave/classworlds.jar hudson.maven.agent.Main /home/hudson/tools/maven/latest /zonestorage/hudson_solaris/home/hudson/hudson-slave/slave.jar /export/home/hudson/hudson-slave/maven-interceptor.jar 55507 /export/home/hudson/hudson-slave/maven2.1-interceptor.jar <===[JENKINS REMOTING CAPACITY]===>channel started log4j:WARN No appenders could be found for logger (org.apache.commons.beanutils.converters.BooleanConverter). log4j:WARN Please initialize the log4j system properly. Executing Maven: -B -f <https://builds.apache.org/job/ctakes-trunk-package/ws/pom.xml> -Dmaven.repo.local=/export/home/hudson/hudson-slave/maven-repositories/1 install [INFO] Scanning for projects... [INFO] Reactor build order: [INFO] Apache cTAKES [INFO] Apache cTAKES common type system [INFO] Apache cTAKES utils [INFO] Apache cTAKES core [INFO] Apache cTAKES part-of-speech tagger [INFO] Apache cTAKES chunker [INFO] Apache cTAKES document preprocessor [INFO] Apache cTAKES dictionary lookup [INFO] Apache cTAKES context dependent tokenizer [INFO] Apache cTAKES LVG lexical tools [INFO] Apache cTAKES named entity contexts [INFO] Apache cTAKES Constituency Parser [INFO] Apache cTAKES CoReference Resolver [INFO] Apache cTAKES Drug NER [INFO] Apache cTAKES Side Effects [INFO] Apache cTAKES Smoking Status [INFO] Apache cTAKES Dependency Parser [INFO] Apache cTAKES Assertion [INFO] Apache cTAKES ctakes-clinical-pipeline [INFO] Apache cTAKES Relation Extractor [INFO] Apache cTAKES Pad Term Spotter [INFO] Apache cTAKES Temporal Information Extraction [INFO] Apache cTAKES Distribution [INFO] ------------------------------------------------------------------------ [INFO] Building Apache cTAKES [INFO] task-segment: [install] [INFO] ------------------------------------------------------------------------ [WARNING] The parameter expression: 'project.build.resources' used in mojo: 'process' has been deprecated. Use 'project.resources' instead. [INFO] [remote-resources:process {execution: default}] [INFO] [site:attach-descriptor {execution: default-attach-descriptor}] [INFO] [install:install {execution: default-install}] [INFO] Installing <https://builds.apache.org/job/ctakes-trunk-package/ws/pom.xml> to /export/home/hudson/hudson-slave/maven-repositories/1/org/apache/ctakes/ctakes/3.0.0-incubating-SNAPSHOT/ctakes-3.0.0-incubating-SNAPSHOT.pom [JENKINS] Archiving <https://builds.apache.org/job/ctakes-trunk-package/ws/pom.xml> to /home/hudson/hudson/jobs/ctakes-trunk-package/modules/org.apache.ctakes$ctakes/builds/2012-10-26_01-26-41/archive/org.apache.ctakes/ctakes/3.0.0-incubating-SNAPSHOT/ctakes-3.0.0-incubating-SNAPSHOT.pom [INFO] ------------------------------------------------------------------------ [INFO] Building Apache cTAKES common type system [INFO] task-segment: [install] [INFO] ------------------------------------------------------------------------ Downloading: http://repo1.maven.org/maven2/org/cleartk/jcasgen-maven-plugin/0.9.3/jcasgen-maven-plugin-0.9.3.pom 6K downloaded (jcasgen-maven-plugin-0.9.3.pom) [INFO] ------------------------------------------------------------------------ [ERROR] BUILD ERROR [INFO] ------------------------------------------------------------------------ [INFO] Error resolving version for 'org.cleartk:jcasgen-maven-plugin': Plugin requires Maven version 3.0 [INFO] ------------------------------------------------------------------------ [INFO] For more information, run Maven with the -e switch [INFO] ------------------------------------------------------------------------ [INFO] Total time: 1 minute 32 seconds [INFO] Finished at: Fri Oct 26 01:32:00 GMT+00:00 2012 [INFO] Final Memory: 36M/321M [INFO] ------------------------------------------------------------------------ channel stopped
