On Windows and Eclipse my checkout gabbed everything necessary, compiled , and
I could run the GUIs.
On Ubuntu Linux I checked out OK, but I get this error at this time.
[INFO] Apache cTAKES ..................................... FAILURE [2.701s]
[INFO] Apache cTAKES common type system .................. SKIPPED
[INFO] Apache cTAKES utils ............................... SKIPPED
[INFO] Apache cTAKES core ................................ SKIPPED
[INFO] Apache cTAKES part-of-speech tagger ............... SKIPPED
[INFO] Apache cTAKES chunker ............................. SKIPPED
[INFO] Apache cTAKES document preprocessor ............... SKIPPED
[INFO] Apache cTAKES dictionary lookup ................... SKIPPED
[INFO] Apache cTAKES context dependent tokenizer ......... SKIPPED
[INFO] Apache cTAKES LVG lexical tools ................... SKIPPED
[INFO] Apache cTAKES named entity contexts ............... SKIPPED
[INFO] Apache cTAKES Constituency Parser ................. SKIPPED
[INFO] Apache cTAKES Dependency Parser ................... SKIPPED
[INFO] Apache cTAKES Assertion's zoner ................... SKIPPED
[INFO] Apache cTAKES Assertion ........................... SKIPPED
[INFO] Apache cTAKES ctakes-clinical-pipeline ............ SKIPPED
[INFO] Apache cTAKES Relation Extractor .................. SKIPPED
[INFO] Apache cTAKES CoReference Resolver ................ SKIPPED
[INFO] Apache cTAKES Drug NER ............................ SKIPPED
[INFO] Apache cTAKES Side Effects ........................ SKIPPED
[INFO] Apache cTAKES Smoking Status ...................... SKIPPED
[INFO] Apache cTAKES Pad Term Spotter .................... SKIPPED
[INFO] Apache cTAKES Temporal Information Extraction ..... SKIPPED
[INFO] Apache cTAKES Distribution ........................ SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 5.264s
[INFO] Finished at: Fri Jan 18 17:17:16 UTC 2013
[INFO] Final Memory: 11M/59M
[INFO] ------------------------------------------------------------------------
[ERROR] Failed to execute goal
org.apache.maven.plugins:maven-remote-resources-plugin:1.3:process (default) on
project ctakes: Error finding remote resources manifests:
/vol1/cTAKES-3.0/target/maven-shared-archive-resources/META-INF/NOTICE (No such
file or directory) -> [Help 1]
org.apache.maven.lifecycle.LifecycleExecutionException: Failed to execute goal
org.apache.maven.plugins:maven-remote-resources-plugin:1.3:process (default) on
project ctakes: Error finding remote resources manifests
at
org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:217)
at
org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:153)
at
org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:145)
at
org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:84)
at
org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:59)
at
org.apache.maven.lifecycle.internal.LifecycleStarter.singleThreadedBuild(LifecycleStarter.java:183)
at
org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:161)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:320)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:156)
at org.apache.maven.cli.MavenCli.execute(MavenCli.java:537)
at org.apache.maven.cli.MavenCli.doMain(MavenCli.java:196)
at org.apache.maven.cli.MavenCli.main(MavenCli.java:141)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:616)
at
org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:290)
at
org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:230)
at
org.codehaus.plexus.classworlds.launcher.Launcher.mainWithExitCode(Launcher.java:409)
at
org.codehaus.plexus.classworlds.launcher.Launcher.main(Launcher.java:352)
Caused by: org.apache.maven.plugin.MojoExecutionException: Error finding remote
resources manifests
at
org.apache.maven.plugin.resources.remote.ProcessRemoteResourcesMojo.processResourceBundles(ProcessRemoteResourcesMojo.java:1220)
at
org.apache.maven.plugin.resources.remote.ProcessRemoteResourcesMojo.execute(ProcessRemoteResourcesMojo.java:518)
at
org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:101)
at
org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:209)
... 19 more
Caused by: java.io.FileNotFoundException:
/vol1/cTAKES-3.0/target/maven-shared-archive-resources/META-INF/NOTICE (No such
file or directory)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(FileOutputStream.java:209)
at java.io.FileOutputStream.<init>(FileOutputStream.java:160)
at java.io.FileWriter.<init>(FileWriter.java:90)
at
org.apache.maven.plugin.resources.remote.ProcessRemoteResourcesMojo.processResourceBundles(ProcessRemoteResourcesMojo.java:1128)
Thanks
Troy Bleeker * Senior Business Analyst CBAP(r) * Biomedical Statistics and
Informatics
Phone: 507-293-1574 * Fax: 507-284-0360 * [email protected]
Mayo Clinic * 200 First Street SW * Rochester, MN 55905 * www.mayoclinic.org
