Ok, after commenting out all the various size_t declarations (in *5*
places) I am stuck with this:
python2.5 `which cython` --embed-positions --incref-local-binop
-I/scratch/mabshoff/cython-0.11-nanny/sage-3.3.rc2-sage.math-only-x86_64-Linux/devel/sage-main
-o sage/matrix/matrix_integer_dense.c sage/matrix/matrix_integer_dense.pyx
Error converting Pyrex file to C:
------------------------------------------------------------
...
raise MemoryError, "out of memory allocating
multi-modular coefficent list"
for j from 0 <= j < self._ncols:
matrix[i][j] = mpz_fdiv_ui(self._matrix[i][j], n)
cdef Linbox_modn_dense L = Linbox_modn_dense()
L.set(n, matrix, self._nrows, self._ncols)
^
------------------------------------------------------------
/scratch/mabshoff/cython-0.11-nanny/sage-3.3.rc2-sage.math-only-x86_64-Linux/devel/sage-main/sage/matrix/matrix_integer_dense.pyx:1161:23:
Cannot assign type 'sage.matrix.matrix_integer_dense.mod_int **' to
'sage.libs.linbox.linbox.mod_int **'
But I guess at this point this should move off the Cython list :)
Cheers,
Michael
PS: my patch so far, but I might have done something very stupid to
cause the above issue :)
diff -r 43f267532b7a sage/combinat/matrices/dancing_links.pyx
--- a/sage/combinat/matrices/dancing_links.pyx Tue Feb 17 17:00:05 2009
-0800
+++ b/sage/combinat/matrices/dancing_links.pyx Fri Feb 20 02:09:18 2009
-0800
@@ -25,8 +25,8 @@
include "../../ext/python_int.pxi"
include "../../ext/python_ref.pxi"
-cdef extern from "stdlib.h":
- ctypedef unsigned long size_t
+#cdef extern from "stdlib.h":
+# ctypedef unsigned long size_t
cdef extern from "dancing_links_c.h":
ctypedef struct vector_int "std::vector<int>":
diff -r 43f267532b7a sage/ext/cdefs.pxi
--- a/sage/ext/cdefs.pxi Tue Feb 17 17:00:05 2009 -0800
+++ b/sage/ext/cdefs.pxi Fri Feb 20 02:09:18 2009 -0800
@@ -2,7 +2,7 @@
include "python.pxi"
cdef extern from "stdlib.h":
- ctypedef unsigned long size_t
+ #ctypedef unsigned long size_t
void free(void *ptr)
void *malloc(size_t size)
void *realloc(void *ptr, size_t size)
diff -r 43f267532b7a sage/ext/python_mem.pxi
--- a/sage/ext/python_mem.pxi Tue Feb 17 17:00:05 2009 -0800
+++ b/sage/ext/python_mem.pxi Fri Feb 20 02:09:18 2009 -0800
@@ -1,5 +1,5 @@
cdef extern from "Python.h":
- ctypedef unsigned long size_t
+ #ctypedef unsigned long size_t
#####################################################################
# 9.2 Memory Interface
diff -r 43f267532b7a sage/ext/stdsage.pxi
--- a/sage/ext/stdsage.pxi Tue Feb 17 17:00:05 2009 -0800
+++ b/sage/ext/stdsage.pxi Fri Feb 20 02:09:18 2009 -0800
@@ -39,8 +39,8 @@
# Memory management
-cdef extern from "stdlib.h":
- ctypedef unsigned long size_t
+#cdef extern from "stdlib.h":
+# ctypedef unsigned long size_t
cdef extern from "stdsage.h":
void sage_free(void *p)
diff -r 43f267532b7a sage/libs/gmp/types.pxd
--- a/sage/libs/gmp/types.pxd Tue Feb 17 17:00:05 2009 -0800
+++ b/sage/libs/gmp/types.pxd Fri Feb 20 02:09:18 2009 -0800
@@ -3,7 +3,7 @@
### Type Declarations ###
# Underlying typedefs
- ctypedef unsigned long size_t
+ #ctypedef unsigned long size_t
ctypedef unsigned long mp_limb_t
ctypedef long mp_size_t
ctypedef long mp_exp_t
diff -r 43f267532b7a sage/libs/pari/decl.pxi
--- a/sage/libs/pari/decl.pxi Tue Feb 17 17:00:05 2009 -0800
+++ b/sage/libs/pari/decl.pxi Fri Feb 20 02:09:18 2009 -0800
@@ -1,7 +1,7 @@
include '../../ext/cdefs.pxi'
cdef extern from "stdlib.h":
- ctypedef unsigned long size_t
+ #ctypedef unsigned long size_t
void free(void *ptr)
void *malloc(size_t size)
void *realloc(void *ptr, size_t size)
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