Author: skillcoyne
Date: 2009-03-19 10:28:24 -0700 (Thu, 19 Mar 2009)
New Revision: 16314
Modified:
csplugins/trunk/isb/skillcoyne/CyGoose/trunk/build.xml
Log:
updates to the compile target
Modified: csplugins/trunk/isb/skillcoyne/CyGoose/trunk/build.xml
===================================================================
--- csplugins/trunk/isb/skillcoyne/CyGoose/trunk/build.xml 2009-03-19
16:44:26 UTC (rev 16313)
+++ csplugins/trunk/isb/skillcoyne/CyGoose/trunk/build.xml 2009-03-19
17:28:24 UTC (rev 16314)
@@ -1,105 +1,115 @@
<project name="CyGoose" default="jar" basedir=".">
- <property file="build.properties" />
- <property name="src.dir" location="${basedir}/src" />
- <property name="build.dir" location="${basedir}/build" />
- <property name="classes.dir" location="${build.dir}/classes" />
- <property name="lib.dir" location="${basedir}/lib" />
+ <property file="build.properties"/>
+ <property name="src.dir" location="${basedir}/src"/>
+ <property name="build.dir" location="${basedir}/build"/>
+ <property name="classes.dir" location="${build.dir}/classes"/>
+ <property name="lib.dir" location="${basedir}/lib"/>
- <property name="jar.file" value="CyGoose.jar" />
+ <property name="jar.file" value="CyGoose.jar"/>
- <target name="check" description="Checks for properties file">
- <fail message="Missing build.properties file. Please copy
build.properties.example and update to reflect your webstart URL.">
- <condition>
- <not>
- <available file="build.properties" />
- </not>
- </condition>
- </fail>
- <fail message="Missing 'cytoscape.dir' key in properties file">
- <condition>
- <not>
- <isset property="cytoscape.dir" />
- </not>
- </condition>
- </fail>
- <fail message="Missing 'gaggle.dir' key in properties file">
- <condition>
- <not>
- <isset property="gaggle.dir" />
- </not>
- </condition>
- </fail>
- </target>
+ <target name="check" description="Checks for properties file">
+ <fail
+ message="Missing build.properties file. Please copy
build.properties.example and update to reflect your webstart URL.">
+ <condition>
+ <not>
+ <available file="build.properties"/>
+ </not>
+ </condition>
+ </fail>
+ <fail message="Missing 'cytoscape.dir' key in properties file">
+ <condition>
+ <not>
+ <isset property="cytoscape.dir"/>
+ </not>
+ </condition>
+ </fail>
+ <fail message="Missing 'gaggle.dir' key in properties file">
+ <condition>
+ <not>
+ <isset property="gaggle.dir"/>
+ </not>
+ </condition>
+ </fail>
+ </target>
- <!-- Project Libraries -->
- <path id="project.classpath">
- <fileset dir="${basedir}/lib">
- <include name="*.jar" />
- </fileset>
- <pathelement location="${classes.dir}" />
- <pathelement location="${cytoscape.dir}/cytoscape.jar" />
- <fileset dir="${cytoscape.dir}/lib">
- <include name="*.jar" />
- </fileset>
- <!-- It appears best to put the gaggle.jar file in the lib dir,
otherwise compile fails -->
- <!-- <pathelement
location="${gaggle.dir}/gaggle.jar" /> -->
- </path>
+ <!-- Project Libraries -->
+ <path id="project.classpath">
+ <fileset dir="${basedir}/lib">
+ <include name="*.jar"/>
+ </fileset>
+ <pathelement location="${classes.dir}"/>
+ <pathelement location="${cytoscape.dir}/cytoscape.jar"/>
+ <fileset dir="${cytoscape.dir}/lib">
+ <include name="*.jar"/>
+ </fileset>
+ <!-- It appears best to put the gaggle.jar file in the lib dir, otherwise
compile fails -->
+ <!-- <pathelement location="${gaggle.dir}/gaggle.jar" /> -->
+ </path>
<target name="clean" description="Clean old build files">
- <delete dir="${build.dir}" />
+ <delete dir="${build.dir}"/>
</target>
<target name="init" depends="check, clean" description="Clean out old build,
setup for new">
- <mkdir dir="${build.dir}" />
- <mkdir dir="${classes.dir}" />
- <!-- maybe need to do fileset if we use any other libraries in
this plugin -->
- <unjar src="${basedir}/lib/gaggle.jar" dest="${classes.dir}"/>
- <delete dir="${classes.dir}/META-INF"/>
- </target>
+ <mkdir dir="${build.dir}"/>
+ <mkdir dir="${classes.dir}"/>
+ <!-- maybe need to do fileset if we use any other libraries in this plugin
-->
+ <unjar src="${basedir}/lib/gaggle.jar" dest="${classes.dir}"/>
+ <delete dir="${classes.dir}/META-INF"/>
+ </target>
- <target name="compile" description="Compile pipeline task"
depends="init">
- <javac srcdir="${src.dir}" destdir="${classes.dir}" debug="on"
failonerror="true">
- <classpath refid="project.classpath" />
- </javac>
- </target>
- <target name="jar" description="Create CyGoose jar file"
depends="compile">
- <copy file="${basedir}/resources/plugin.props"
todir="${classes.dir}/org/systemsbiology/cytoscape" />
- <jar destfile="${build.dir}/${jar.file}">
- <manifest>
- <attribute name="Cytoscape-Plugin"
value="org.systemsbiology.cytoscape.GagglePlugin" />
- </manifest>
+ <target name="compile" description="Compile" depends="init">
+ <javac
+ srcdir="${src.dir}"
+ destdir="${classes.dir}"
+ nowarn="off"
+ debug="on"
+ source="1.5"
+ optimize="on"
+ failonerror="true">
+ <classpath refid="project.classpath"/>
+ <compilerarg line="-Xmaxwarns 10000"/>
+ </javac>
+ </target>
- <fileset dir="${classes.dir}" />
- </jar>
- </target>
+ <target name="jar" description="Create CyGoose jar file" depends="compile">
+ <copy file="${basedir}/resources/plugin.props"
todir="${classes.dir}/org/systemsbiology/cytoscape"/>
+ <jar destfile="${build.dir}/${jar.file}">
+ <manifest>
+ <attribute name="Cytoscape-Plugin"
value="org.systemsbiology.cytoscape.GagglePlugin"/>
+ </manifest>
- <target name="copyJar" depends="jar" description="Copy to Cytocape
project">
- <copy todir="${cytoscape.dir}/plugins/core"
file="${build.dir}/${jar.file}"/>
- </target>
-
- <target name="signJar" depends="jar" description="Sign jar file">
- <!-- Important to use same keypass information as used for
signing cytoscape -->
- <signjar alias="cytoscape" storepass="secret"
jar="${build.dir}/${jar.file}"/>
- </target>
+ <fileset dir="${classes.dir}"/>
+ </jar>
+ </target>
- <target name="checkWebstart">
- <fail message="Missing property 'webstartDir', ant
-DwebstartDir [ant target] ">
- <condition>
- <not>
- <isset property="webstartDir" />
- </not>
- </condition>
- </fail>
- </target>
+ <target name="copyJar" depends="jar" description="Copy to Cytocape project">
+ <copy todir="${cytoscape.dir}/plugins/core"
file="${build.dir}/${jar.file}"/>
+ </target>
- <target name="addToWebstart" depends="checkWebstart, signJar"
description="Copy plugin to cytoscape webstart">
- <copy file="${build.dir}/${jar.file}"
toDir="${webstartDir}/plugins"/>
- </target>
-
- <target name="localCopy" depends="jar" description="Copy to local
Cytoscape">
- <copy file="${build.dir}/${jar.file}"
toDir="${cytoscape.dir}/plugins/core"/>
- </target>
-
+ <target name="signJar" depends="jar" description="Sign jar file">
+ <!-- Important to use same keypass information as used for signing
cytoscape -->
+ <signjar alias="cytoscape" storepass="secret"
jar="${build.dir}/${jar.file}"/>
+ </target>
+
+ <target name="checkWebstart">
+ <fail message="Missing property 'webstartDir', ant -DwebstartDir [ant
target] ">
+ <condition>
+ <not>
+ <isset property="webstartDir"/>
+ </not>
+ </condition>
+ </fail>
+ </target>
+
+ <target name="addToWebstart" depends="checkWebstart, signJar"
description="Copy plugin to cytoscape webstart">
+ <copy file="${build.dir}/${jar.file}" toDir="${webstartDir}/plugins"/>
+ </target>
+
+ <target name="localCopy" depends="jar" description="Copy to local Cytoscape">
+ <copy file="${build.dir}/${jar.file}"
toDir="${cytoscape.dir}/plugins/core"/>
+ </target>
+
</project>
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