Author: ruschein Date: 2009-12-15 14:57:16 -0800 (Tue, 15 Dec 2009) New Revision: 18771
Added: cytoscape/trunk/testData/NNFData/Sample.nnf Log: Human readable sample. Added: cytoscape/trunk/testData/NNFData/Sample.nnf =================================================================== --- cytoscape/trunk/testData/NNFData/Sample.nnf (rev 0) +++ cytoscape/trunk/testData/NNFData/Sample.nnf 2009-12-15 22:57:16 UTC (rev 18771) @@ -0,0 +1,142 @@ +# A simple 3-level nested network example file. +# +# The top-level network is called "Overview", below that are "Level1.x" and below that "Level2.x". + +# Top-level network +Overview Level1.1 interact Level1.2 +Overview Level1.2 interact Level1.3 +Overview Level1.4 +Overview Level1.5 interact Level1.1 + +# First level-1 network +Level1.1 SimpleNode1 interact Level2.1 # Note that "SimpleNode1" does not have a nested network because there is +Level1.1 SimpleNode2 interact Level2.2 # no network named "SimpleNode1", i.e. "SimpleNode1" does not appear in the +Level1.1 Level2.1 interact Level2.8 # first column anywhere in this file. + +# Second level-1 network +Level1.2 Level2.7 interact Level2.2 +Level1.2 Level2.5 interact SimpleNode3 +Level1.2 Level2.4 interact Level2.2 +Level1.2 Level2.2 interact SimpleNode4 +Level1.2 Level2.2 interact Level2.4 +Level1.2 Level2.1 interact Level2.7 +Level1.2 Level2.5 interact Level2.4 + +# Third level-1 network +Level1.3 Level2.4 interact Level2.5 +Level1.3 Level2.6 interact Level2.4 +Level1.3 Level2.6 interact Level2.5 + +# Fourth level-1 network +Level1.4 Level2.1 interact Level2.8 +Level1.4 SimpleNode2 interact Level2. +Level1.4 Level2.5 interact Level2.3 +Level1.4 Level2.2 interact SimpleNode5 +Level1.4 Level2.5 interact Level2.2 +Level1.4 SimpleNode6 interact Level2.7 + +# Fifth level-1 network +Level1.5 Level2.4 interact Level2.2 +Level1.5 SimpleNode7 interact Level2.1 +Level1.5 Level2.9 interact Level2. +Level1.5 Level2.3 interact Level2.5 +Level1.5 Level2.2 interact Level2.2 + +# First level-2 network +Level 2.1 Node1 interact Node2 +Level 2.1 Node2 interact Node1 +Level 2.1 Node4 interact Node4 +Level 2.1 Node5 interact Node6 +Level 2.1 Node3 interact Node8 +Level 2.1 Node5 interact Node2 +Level 2.1 Node8 interact Node5 +Level 2.1 Node2 interact Node6 +Level 2.1 Node5 interact Node7 + +# Second level-2 network +Level 2.2 Node6 interact Node9 +Level 2.2 Node8 interact Node11 +Level 2.2 Node3 interact Node12 +Level 2.2 Node6 interact Node3 +Level 2.2 Node20 interact Node4 +Level 2.2 Node11 interact Node7 +Level 2.2 Node4 interact Node13 +Level 2.2 Node8 interact Node20 +Level 2.2 Node12 interact Node3 + +# Third level-2 network +Level 2.3 Node5 interact Node4 +Level 2.3 Node4 interact Node1 +Level 2.3 Node8 interact Node2 +Level 2.3 Node12 interact Node8 +Level 2.3 Node11 interact Node13 +Level 2.3 Node9 interact Node12 +Level 2.3 Node7 interact Node4 +Level 2.3 Node3 interact Node20 +Level 2.3 Node12 interact Node7 + +# Fourth level-2 network +Level 2.3 Node11 interact Node13 +Level 2.4 Node1 interact Node2 +Level 2.4 Node3 interact Node8 +Level 2.4 Node2 interact Node10 +Level 2.4 Node14 interact Node19 +Level 2.4 Node9 interact Node7 +Level 2.4 Node8 interact Node6 +Level 2.4 Node10 interact Node5 +Level 2.4 Node11 interact Node1 + +# Fifth level-2 network +Level 2.5 Node16 interact Node15 +Level 2.5 Node15 interact Node10 +Level 2.5 Node2 interact Node8 +Level 2.5 Node9 interact Node9 +Level 2.5 Node8 interact Node2 +Level 2.5 Node12 interact Node3 +Level 2.5 Node15 interact Node11 +Level 2.5 Node16 interact Node10 +Level 2.5 Node7 interact Node8 + +# Sixth level-2 network +Level 2.6 Node10 interact Node4 +Level 2.6 Node20 interact Node2 +Level 2.6 Node4 interact Node8 +Level 2.6 Node8 interact Node17 +Level 2.6 Node16 interact Node20 +Level 2.6 Node20 interact Node8 +Level 2.6 Node8 interact Node6 +Level 2.6 Node6 interact Node4 +Level 2.6 Node5 interact Node17 + +# Seventh level-2 network +Level 2.7 Node2 interact Node5 +Level 2.7 Node4 interact Node7 +Level 2.7 Node6 interact Node4 +Level 2.7 Node4 interact Node3 +Level 2.7 Node3 interact Node2 +Level 2.7 Node13 interact Node18 +Level 2.7 Node6 interact Node13 +Level 2.7 Node5 interact Node20 +Level 2.7 Node4 interact Node5 + +# Eighth level-2 network +Level 2.8 Node4 interact Node6 +Level 2.8 Node15 interact Node16 +Level 2.8 Node6 interact Node15 +Level 2.8 Node12 interact Node4 +Level 2.8 Node4 interact Node6 +Level 2.8 Node2 interact Node7 +Level 2.8 Node11 interact Node9 +Level 2.8 Node9 interact Node10 +Level 2.8 Node8 interact Node12 + +# Ninth level-2 network +Level 2.9 Node3 interact Node6 +Level 2.9 Node4 interact Node6 +Level 2.9 Node9 interact Node12 +Level 2.9 Node17 interact Node12 +Level 2.9 Node8 interact Node9 +Level 2.9 Node4 interact Node16 +Level 2.9 Node17 interact Node8 +Level 2.9 Node2 interact Node4 +Level 2.9 Node17 interact Node2 -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. 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