Author: kono Date: 2009-12-15 16:35:27 -0800 (Tue, 15 Dec 2009) New Revision: 18775
Modified: csplugins/trunk/ucsd/kono/PSIQUICUniversalClient/plugin.props csplugins/trunk/ucsd/kono/PSIQUICUniversalClient/src/org/cytoscape/webservice/psicquic/PSICQUICUniversalClient.java Log: Nested network feature is used to visualize query result. Modified: csplugins/trunk/ucsd/kono/PSIQUICUniversalClient/plugin.props =================================================================== --- csplugins/trunk/ucsd/kono/PSIQUICUniversalClient/plugin.props 2009-12-16 00:21:23 UTC (rev 18774) +++ csplugins/trunk/ucsd/kono/PSIQUICUniversalClient/plugin.props 2009-12-16 00:35:27 UTC (rev 18775) @@ -11,7 +11,7 @@ pluginDescription=PSICQUIC Web Service Universal Client. You can perform meta-search for <a href="http://code.google.com/p/psicquic/";>PSICQUIC data service providers</a>. This plugin works with Cytoscape 2.7.0 (not released yet) or later. # Plugin version number, this must be two numbers separated by a decimlal. Ex. 0.2, 14.03 -pluginVersion=0.06 +pluginVersion=0.07 # Compatible Cytoscape version cytoscapeVersion=2.7 Modified: csplugins/trunk/ucsd/kono/PSIQUICUniversalClient/src/org/cytoscape/webservice/psicquic/PSICQUICUniversalClient.java =================================================================== --- csplugins/trunk/ucsd/kono/PSIQUICUniversalClient/src/org/cytoscape/webservice/psicquic/PSICQUICUniversalClient.java 2009-12-16 00:21:23 UTC (rev 18774) +++ csplugins/trunk/ucsd/kono/PSIQUICUniversalClient/src/org/cytoscape/webservice/psicquic/PSICQUICUniversalClient.java 2009-12-16 00:35:27 UTC (rev 18775) @@ -21,6 +21,7 @@ import org.hupo.psi.mi.psicquic.RequestInfo; import cytoscape.CyNetwork; +import cytoscape.CyNode; import cytoscape.Cytoscape; import cytoscape.data.webservice.CyWebServiceEvent; import cytoscape.data.webservice.CyWebServiceException; @@ -275,13 +276,23 @@ if (vmm.getCalculatorCatalog().getVisualStyle(defaultVS.getName()) == null) vmm.getCalculatorCatalog().addVisualStyle(defaultVS); + + // Use nested network feature + final CyNode centerNode = Cytoscape.getCyNode(parentName, true); + parentNetwork.addNode(centerNode); + for (CyNetwork net : target) { vmm.setVisualStyle(defaultVS); final CyNetworkView targetView = Cytoscape.getNetworkView(net .getIdentifier()); targetView.setVisualStyle(defaultVS.getName()); targetView.redrawGraph(true, false); + CyNode nestedNode = Cytoscape.getCyNode(net.getTitle(), true); + nestedNode.setNestedNetwork(net); + parentNetwork.addNode(nestedNode); + parentNetwork.addEdge(Cytoscape.getCyEdge(nestedNode, centerNode, "interaction", "query_result", true)); } + Cytoscape.createNetworkView(parentNetwork); query = null; queryList = null; -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/cytoscape-cvs?hl=en.
