Author: mcreech
Date: 2010-02-02 17:05:41 -0800 (Tue, 02 Feb 2010)
New Revision: 19154
Modified:
csplugins/trunk/agilent/Cytoscape/release-notes.html
Log:
version 0.04 notes
Modified: csplugins/trunk/agilent/Cytoscape/release-notes.html
===================================================================
--- csplugins/trunk/agilent/Cytoscape/release-notes.html 2010-02-03
01:05:19 UTC (rev 19153)
+++ csplugins/trunk/agilent/Cytoscape/release-notes.html 2010-02-03
01:05:41 UTC (rev 19154)
@@ -1,10 +1,31 @@
<HTML>
<HEAD>
-<TITLE>Cytoscape-AG Release Notes (version 0.03)</TITLE>
+<TITLE>Cytoscape-AG Release Notes (version 0.04)</TITLE>
</HEAD>
<BODY>
-<H1>Cytoscape-AG Release Notes (version 0.03)</H1>
+<H1>Cytoscape-AG Release Notes (version 0.04)</H1>
+Following is a list of the modifications (see comments with "MLC 02/02/10"):
+<OL>
+<LI>Changed EMBEDDED_WINDOW mode to not dispose of the CytoscapeDesktop on
exit.
+
+<P>We would like to just dispose of the desktop, but Cytoscape is not
+designed to create a new Cytoscape while another is still alive. In
+other words, we can't just call 'CyMain.main (args)' and have a new
+Cytoscape that we can use. Many operations, like
+Cytoscape.getDesktop() just return a singleton instance that is now
+bound to the old desktop. To make matters worse, all the data content
+(mapping structures, nodes, networks) from previous usage is there. So
+our approach is to just make the existing desktop not visible and
+reset Cytoscape to a new session by calling:
+<PRE>
+ getDesktop().setVisible (false);
+ Cytoscape.createNewSession ();
+</PRE>
+</P></LI>
+</OL>
+
+<H2>Cytoscape-AG Release Notes (version 0.03)</H2>
Following is a list of the modifications (see comments with "MLC 01/31/10"):
<OL>
<LI>Added temporary ability to remove popup context menu for "WikiPathways Web
Service Client", controlled by the runstring parameter ("W").
@@ -73,7 +94,7 @@
</OL>
-<SMALL><EM>This page was last updated: 01/31/10</EM></SMALL>
+<SMALL><EM>This page was last updated: 02/02/10</EM></SMALL>
</BODY>
</HTML>
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