Author: mes
Date: 2010-02-12 10:12:10 -0800 (Fri, 12 Feb 2010)
New Revision: 19317
Modified:
coreplugins/trunk/BioPAX/src/cytoscape/coreplugins/biopax/MapBioPaxToCytoscape.java
Log:
fixed code that was using deprecated custom graphic code
Modified:
coreplugins/trunk/BioPAX/src/cytoscape/coreplugins/biopax/MapBioPaxToCytoscape.java
===================================================================
---
coreplugins/trunk/BioPAX/src/cytoscape/coreplugins/biopax/MapBioPaxToCytoscape.java
2010-02-12 17:27:51 UTC (rev 19316)
+++
coreplugins/trunk/BioPAX/src/cytoscape/coreplugins/biopax/MapBioPaxToCytoscape.java
2010-02-12 18:12:10 UTC (rev 19317)
@@ -19,6 +19,9 @@
import cytoscape.task.TaskMonitor;
import cytoscape.view.CyNetworkView;
+import cytoscape.render.stateful.NodeDetails;
+import cytoscape.render.stateful.CustomGraphic;
+
import giny.model.Edge;
import giny.view.NodeView;
@@ -1491,9 +1494,9 @@
DNodeView dingNodeView = (DNodeView) nodeView;
// remove existing custom nodes
- int numExistingCustomShapes =
dingNodeView.getCustomGraphicCount();
- for (int lc = 0; lc < numExistingCustomShapes; lc++) {
- dingNodeView.removeCustomGraphic(0);
+ Iterator<CustomGraphic> it =
dingNodeView.customGraphicIterator();
+ while ( it.hasNext() ) {
+ dingNodeView.removeCustomGraphic( it.next() );
}
for (int lc = 0; lc < modificationCount; lc++) {
@@ -1517,7 +1520,7 @@
}
// add the graphic
- dingNodeView.addCustomGraphic(rect, paint, lc);
+ dingNodeView.addCustomGraphic(rect, paint,
NodeDetails.ANCHOR_CENTER);
}
}
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