See <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/cytoscape$application/12/changes>
Changes: [mes] trying something for hudson to build correctly ------------------------------------------ [...truncated 298 lines...] Running cytoscape.view.FlagAndSelectionHandlerTest Tests run: 2, Failures: 0, Errors: 2, Skipped: 0, Time elapsed: 0.004 sec <<< FAILURE! Running cytoscape.util.MiscTest Tests run: 3, Failures: 0, Errors: 1, Skipped: 0, Time elapsed: 0.381 sec <<< FAILURE! Running cytoscape.data.annotation.OntologyTermTest Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.002 sec Running cytoscape.data.ontology.OntologyTest Tests run: 15, Failures: 0, Errors: 15, Skipped: 0, Time elapsed: 0.017 sec <<< FAILURE! Running cytoscape.data.InteractionTest Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.002 sec Running cytoscape.data.attr.util.MultiHashMapTest Tests run: 4, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.003 sec Running cytoscape.visual.NodeShapeTest Tests run: 7, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.003 sec Running cytoscape.data.ontology.readers.DBCrossReferenceReaderTest Tests run: 1, Failures: 0, Errors: 1, Skipped: 0, Time elapsed: 0.004 sec <<< FAILURE! Running cytoscape.BugHideNodeEventFiringTest Tests run: 1, Failures: 0, Errors: 1, Skipped: 0, Time elapsed: 0.002 sec <<< FAILURE! Running cytoscape.data.CyNetworkEventTest Tests run: 1, Failures: 0, Errors: 1, Skipped: 0, Time elapsed: 0.002 sec <<< FAILURE! Running cytoscape.data.NetworkDataTest Tests run: 2, Failures: 0, Errors: 1, Skipped: 0, Time elapsed: 0.017 sec <<< FAILURE! Running cytoscape.data.SelectFilterTest Tests run: 4, Failures: 0, Errors: 4, Skipped: 0, Time elapsed: 0.005 sec <<< FAILURE! Running cytoscape.data.readers.MetadataParserTest Tests run: 2, Failures: 0, Errors: 2, Skipped: 0, Time elapsed: 0.003 sec <<< FAILURE! Running cytoscape.visual.VisualPropertyDependencyTest Tests run: 5, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.003 sec Running cytoscape.visual.NodeAppearanceTest Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.002 sec Running cytoscape.data.CyAttributesUtilsTest Tests run: 5, Failures: 0, Errors: 5, Skipped: 0, Time elapsed: 0.006 sec <<< FAILURE! Running cytoscape.util.TestUtil Tests run: 0, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.03 sec Running cytoscape.util.GraphSetUtilsTest Tests run: 7, Failures: 0, Errors: 7, Skipped: 0, Time elapsed: 0.006 sec <<< FAILURE! Running cytoscape.util.ScalerFactoryTest Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.002 sec Running cytoscape.util.MathUtilTest Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.002 sec Running cytoscape.visual.mappings.continuous.TestContinuousMappingReader Tests run: 1, Failures: 0, Errors: 1, Skipped: 0, Time elapsed: 0.002 sec <<< FAILURE! Running cytoscape.plugin.PluginFileReaderTest Tests run: 10, Failures: 0, Errors: 10, Skipped: 0, Time elapsed: 0.391 sec <<< FAILURE! Running cytoscape.data.writers.CytoscapeSessionWriterTest Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.002 sec Running cytoscape.plugin.PluginManagerTest Tests run: 24, Failures: 0, Errors: 18, Skipped: 0, Time elapsed: 0.74 sec <<< FAILURE! Results : Tests in error: testGetNodeAttributeType(cytoscape.visual.mappings.MappingUtilTest) testGetEdgeAttributeType(cytoscape.visual.mappings.MappingUtilTest) testBypass(cytoscape.visual.VisualMappingManagerTest) testReadBookmarks(cytoscape.data.readers.BookmarkReaderTest) testReader(cytoscape.visual.mappings.discrete.DiscreteMappingReaderTest) testControllerType(cytoscape.visual.mappings.discrete.DiscreteMappingReaderTest) testReadOBO(cytoscape.data.ontology.readers.OBOFlatFileReaderTest) testCalculator1(cytoscape.visual.mappings.continuous.TestContinuousColorRangeCalculator) testCalculator2(cytoscape.visual.mappings.continuous.TestContinuousColorRangeCalculator) testDefaultAppearance(cytoscape.visual.EdgeAppearanceCalculatorTest) testApplyProperties(cytoscape.visual.EdgeAppearanceCalculatorTest) testAdd(cytoscape.data.synonyms.AliasesTest) testRemove(cytoscape.data.synonyms.AliasesTest) testWrite(cytoscape.data.writers.InteractionWriterTest) testInteractionString(cytoscape.data.writers.InteractionWriterTest) testXGMMLWriterRoundTrip1(cytoscape.data.writers.XGMMLWriterTest) testXGMMLWriterRoundTrip2aFullEncodingDefault(cytoscape.data.writers.XGMMLWriterTest) testXGMMLWriterRoundTrip2aFullEncodingOn(cytoscape.data.writers.XGMMLWriterTest) testXGMMLWriterRoundTrip2aFullEncodingOff(cytoscape.data.writers.XGMMLWriterTest) testXGMMLWriterRoundTrip2bFullEncodingDefault(cytoscape.data.writers.XGMMLWriterTest) testXGMMLWriterRoundTrip2bFullEncodingOn(cytoscape.data.writers.XGMMLWriterTest) testXGMMLWriterRoundTrip2bFullEncodingOff(cytoscape.data.writers.XGMMLWriterTest) testXGMMLWriterRoundTrip2cFullEncodingDefault(cytoscape.data.writers.XGMMLWriterTest) testXGMMLWriterRoundTrip2cFullEncodingOn(cytoscape.data.writers.XGMMLWriterTest) testXGMMLWriterRoundTrip2cFullEncodingOff(cytoscape.data.writers.XGMMLWriterTest) testXGMMLWriterBug0001938(cytoscape.data.writers.XGMMLWriterTest) testWriter(cytoscape.visual.mappings.continuous.TestContinuousMappingWriter) testGetCategory(cytoscape.util.BookmarksUtilTest) testGetDataSourceList(cytoscape.util.BookmarksUtilTest) testCreateNetwork(cytoscape.data.CyNetworkTest) testGetTitle(cytoscape.data.CyNetworkTest) testSetTitle(cytoscape.data.CyNetworkTest) testGetIdentifier(cytoscape.data.CyNetworkTest) testSetIdentifier(cytoscape.data.CyNetworkTest) testAppendNetwork(cytoscape.data.CyNetworkTest) testSelectAllNodes(cytoscape.data.CyNetworkTest) testSelectAllEdges(cytoscape.data.CyNetworkTest) testUnselectAllNodes(cytoscape.data.CyNetworkTest) testUnselectAllEdges(cytoscape.data.CyNetworkTest) testSetSelectedNodeStateCollectionBoolean(cytoscape.data.CyNetworkTest) testSetSelectedNodeStateNodeBoolean(cytoscape.data.CyNetworkTest) testSetSelectedEdgeStateCollectionBoolean(cytoscape.data.CyNetworkTest) testSetSelectedEdgeStateEdgeBoolean(cytoscape.data.CyNetworkTest) testIsSelectedNode(cytoscape.data.CyNetworkTest) testIsSelectedEdge(cytoscape.data.CyNetworkTest) testGetSelectedNodes(cytoscape.data.CyNetworkTest) testGetSelectedEdges(cytoscape.data.CyNetworkTest) testCyNetworkListener(cytoscape.data.CyNetworkTest) testAddNodeInt(cytoscape.data.CyNetworkTest) testAddNodeNode(cytoscape.data.CyNetworkTest) testRemoveNode(cytoscape.data.CyNetworkTest) testAddEdgeInt(cytoscape.data.CyNetworkTest) testAddEdgeEdge(cytoscape.data.CyNetworkTest) testRemoveEdge(cytoscape.data.CyNetworkTest) testSetTitleEvent(cytoscape.data.CyNetworkTest) testBug(cytoscape.BugGetCyNodeTest) testGetBypass(cytoscape.visual.BypassHelperTest) testGetColorBypass(cytoscape.visual.BypassHelperTest) testParseColorText(cytoscape.util.ColorUtilTest) testGetColorAsText(cytoscape.util.ColorUtilTest) testBug925(cytoscape.view.CytoscapeViewTest) testFilterToViewSelect(cytoscape.view.CytoscapeViewTest) testViewToFilterSelect(cytoscape.view.CytoscapeViewTest) testGetReader(cytoscape.util.GMLFileFilterTest) testWriter(cytoscape.visual.mappings.discrete.DiscreteMappingWriterTest) testControllerTypeWriting(cytoscape.visual.mappings.discrete.DiscreteMappingWriterTest) testControllerTypeWritingWithAttr(cytoscape.visual.mappings.discrete.DiscreteMappingWriterTest) testPassThrough(cytoscape.visual.mappings.PassthroughMappingTest) testNestedNetworkReconstruction1(cytoscape.data.readers.CytoscapeSessionReaderTest) testNestedNetworkReconstruction2(cytoscape.data.readers.CytoscapeSessionReaderTest) testGetImportHandler(cytoscape.CytoscapeTest) testNullNetwork(cytoscape.CytoscapeTest) testCreateNonexistentNetwork(cytoscape.CytoscapeTest) testBug839(cytoscape.CytoscapeTest) testgetCyEdgeWithStrings(cytoscape.CytoscapeTest) testgetCyEdgeWithNodes(cytoscape.CytoscapeTest) testGetCyEdgeWithBadNodeStrings(cytoscape.CytoscapeTest) testSetNestedNetworkAndGetNestedNetwork(cytoscape.CytoscapeTest) testSetNestedNetwork_before(cytoscape.CyNodeTest) testSetNestedNetwork_after(cytoscape.CyNodeTest) testGMLImport(cytoscape.data.readers.FileImporterTest) testXGMMLImport(cytoscape.data.readers.FileImporterTest) testSIFImport(cytoscape.data.readers.FileImporterTest) testReadFromTypicalFile(cytoscape.data.readers.InteractionsReaderTest) testReadFileWithNoInteractions(cytoscape.data.readers.InteractionsReaderTest) testGetGraph(cytoscape.data.readers.InteractionsReaderTest) testGetGraphAndEdgeAttributes(cytoscape.data.readers.InteractionsReaderTest) testReadMultiWordProteinsFile(cytoscape.data.readers.InteractionsReaderTest) testReadMultiWordProteinsFileWithErrantSpaces(cytoscape.data.readers.InteractionsReaderTest) testProperties(cytoscape.visual.VizMapPropertiesTest) testVisualStyle(cytoscape.visual.VizMapPropertiesTest) testBypass(cytoscape.visual.NodeAppearanceCalculatorTest) testDefaultAppearance(cytoscape.visual.NodeAppearanceCalculatorTest) testApplyProperties(cytoscape.visual.NodeAppearanceCalculatorTest) testNodeSizeLock(cytoscape.visual.NodeAppearanceCalculatorTest) testSmallGraphRead(cytoscape.data.readers.GMLReaderTest) testMediumGraphRead(cytoscape.data.readers.GMLReaderTest) testIllFormattedGML(cytoscape.data.readers.GMLReaderTest) testBug1565(cytoscape.data.readers.GMLReaderTest) testGood1(cytoscape.data.readers.NNFReaderTest) testGood2(cytoscape.data.readers.NNFReaderTest) testGood3(cytoscape.data.readers.NNFReaderTest) testGood4(cytoscape.data.readers.NNFReaderTest) testGood5(cytoscape.data.readers.NNFReaderTest) testGood6(cytoscape.data.readers.NNFReaderTest) testBad1(cytoscape.data.readers.NNFReaderTest) testBad2(cytoscape.data.readers.NNFReaderTest) testMultipleFiles(cytoscape.data.readers.NNFReaderTest) testCtor(cytoscape.data.SelectEventTest) testFilterToView(cytoscape.view.FlagAndSelectionHandlerTest) testViewToFilter(cytoscape.view.FlagAndSelectionHandlerTest) testParseRGBTest(cytoscape.util.MiscTest) testGetName(cytoscape.data.ontology.OntologyTest) testGetCurator(cytoscape.data.ontology.OntologyTest) testAdd(cytoscape.data.ontology.OntologyTest) testSize(cytoscape.data.ontology.OntologyTest) testGetTerms(cytoscape.data.ontology.OntologyTest) testContainsTerm(cytoscape.data.ontology.OntologyTest) testGetTerm(cytoscape.data.ontology.OntologyTest) testToString(cytoscape.data.ontology.OntologyTest) testContainsTriple(cytoscape.data.ontology.OntologyTest) testCreateTermStringString(cytoscape.data.ontology.OntologyTest) testCreateTermStringStringObjectArray(cytoscape.data.ontology.OntologyTest) testCreateTriple(cytoscape.data.ontology.OntologyTest) testDeleteTerm(cytoscape.data.ontology.OntologyTest) testGetDescription(cytoscape.data.ontology.OntologyTest) testGetTriples(cytoscape.data.ontology.OntologyTest) testGetXrefMap(cytoscape.data.ontology.readers.DBCrossReferenceReaderTest) testBug(cytoscape.BugHideNodeEventFiringTest) testBasic(cytoscape.data.CyNetworkEventTest) testSetNodeAttributeValue(cytoscape.data.NetworkDataTest) testSingleFlags(cytoscape.data.SelectFilterTest) testGroupFlags(cytoscape.data.SelectFilterTest) testFlagAll(cytoscape.data.SelectFilterTest) testListeners(cytoscape.data.SelectFilterTest) testMakeNewMetadataMap(cytoscape.data.readers.MetadataParserTest) testSetMetadata(cytoscape.data.readers.MetadataParserTest) testToString(cytoscape.data.CyAttributesUtilsTest) testTraverseAttributeValues(cytoscape.data.CyAttributesUtilsTest) testCopyAttributes(cytoscape.data.CyAttributesUtilsTest) testCopyAttribute(cytoscape.data.CyAttributesUtilsTest) testCopyAttribute2(cytoscape.data.CyAttributesUtilsTest) testNetwork(cytoscape.util.GraphSetUtilsTest) testIntersection(cytoscape.util.GraphSetUtilsTest) testDifference(cytoscape.util.GraphSetUtilsTest) testDifference2(cytoscape.util.GraphSetUtilsTest) testDifference_2(cytoscape.util.GraphSetUtilsTest) testDifference2_2(cytoscape.util.GraphSetUtilsTest) testUnion(cytoscape.util.GraphSetUtilsTest) testReader(cytoscape.visual.mappings.continuous.TestContinuousMappingReader) testPluginFileReader(cytoscape.plugin.PluginFileReaderTest) testGetProjectName(cytoscape.plugin.PluginFileReaderTest) testGetProjectDescription(cytoscape.plugin.PluginFileReaderTest) testGetProjectUrl(cytoscape.plugin.PluginFileReaderTest) testGetPlugins(cytoscape.plugin.PluginFileReaderTest) testGetPluginsLicense(cytoscape.plugin.PluginFileReaderTest) testGetThemes(cytoscape.plugin.PluginFileReaderTest) testReadFileMissingThemes(cytoscape.plugin.PluginFileReaderTest) testVersionReads(cytoscape.plugin.PluginFileReaderTest) testThemePlugins(cytoscape.plugin.PluginFileReaderTest) testDownloadPluginWebstart(cytoscape.plugin.PluginManagerTest) testInquireString(cytoscape.plugin.PluginManagerTest) testInquirePartialXML(cytoscape.plugin.PluginManagerTest) testInstallTheme(cytoscape.plugin.PluginManagerTest) testInstallPlugin(cytoscape.plugin.PluginManagerTest) testInstallPluginZip(cytoscape.plugin.PluginManagerTest) testInstallIncorrectFileType(cytoscape.plugin.PluginManagerTest) testDeletePluginInfo(cytoscape.plugin.PluginManagerTest) testDeletePlugin(cytoscape.plugin.PluginManagerTest) testDeleteTheme(cytoscape.plugin.PluginManagerTest) testFindThemeUpdates(cytoscape.plugin.PluginManagerTest) testFindPluginUpdates(cytoscape.plugin.PluginManagerTest) testUpdateTheme(cytoscape.plugin.PluginManagerTest) testUpdatePlugin(cytoscape.plugin.PluginManagerTest) testDownloadGoodTheme(cytoscape.plugin.PluginManagerTest) testDownloadGoodPlugin(cytoscape.plugin.PluginManagerTest) testDownloadBadPlugin(cytoscape.plugin.PluginManagerTest) testDuplicates(cytoscape.plugin.PluginManagerTest) Tests run: 344, Failures: 0, Errors: 178, Skipped: 0 [HUDSON] Recording test results [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/cytoscape$application/ws/pom.xml> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cytoscape_2.X_application/modules/cytoscape$application/builds/2010-08-04_16-07-20/archive/cytoscape/application/2.8.0-SNAPSHOT/pom.xml [INFO] ------------------------------------------------------------------------ [ERROR] BUILD FAILURE [INFO] ------------------------------------------------------------------------ [INFO] There are test failures. Please refer to <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/cytoscape$application/ws/target/surefire-reports> for the individual test results. [INFO] ------------------------------------------------------------------------ [INFO] For more information, run Maven with the -e switch [INFO] ------------------------------------------------------------------------ [INFO] Total time: 1 minute 12 seconds [INFO] Finished at: Wed Aug 04 16:08:34 EDT 2010 [INFO] Final Memory: 76M/629M [INFO] ------------------------------------------------------------------------ Maven failed with error. -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/cytoscape-cvs?hl=en.
