See <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20api/547/changes>
Changes: [mes] added a stub table manager for testing [mes] updates for event api separation [mes] moved [mes] moved [mes] moved [mes] moved [mes] moved [mes] moved [mes] moved [mes] moved [mes] moved [mes] moved [mes] moved [mes] moved [mes] moved [mes] move [mes] changed how CyDataTables are managed for networks ------------------------------------------ Started by an SCM change Checking out http://chianti.ucsd.edu/svn/core3/model-api/trunk A osgi.bnd A src A src/test A src/test/java A src/test/java/org A src/test/java/org/cytoscape A src/test/java/org/cytoscape/model A src/test/java/org/cytoscape/model/StubTableManager.java A src/test/java/org/cytoscape/model/AbstractCyDataTableTest.java A src/test/java/org/cytoscape/model/AbstractCyTableManagerTest.java A src/test/java/org/cytoscape/model/AbstractIdentifiableTest.java A src/test/java/org/cytoscape/model/subnetwork A src/test/java/org/cytoscape/model/subnetwork/AbstractCySubNetworkTest.java A src/test/java/org/cytoscape/model/subnetwork/AbstractCyMetaNodeTest.java A src/test/java/org/cytoscape/model/subnetwork/AbstractCyRootNetworkTest.java A src/test/java/org/cytoscape/model/AbstractCyEdgeTest.java A src/test/java/org/cytoscape/model/events A src/test/java/org/cytoscape/model/events/AddedNodeEventTest.java A src/test/java/org/cytoscape/model/AbstractCyNodeTest.java A src/test/java/org/cytoscape/model/AbstractCyNetworkTest.java A src/test/java/org/cytoscape/model/AbstractGraphObjectTest.java A src/main A src/main/java A src/main/java/org A src/main/java/org/cytoscape A src/main/java/org/cytoscape/model A src/main/java/org/cytoscape/model/CyEdge.java A src/main/java/org/cytoscape/model/CyRow.java A src/main/java/org/cytoscape/model/CyDataTableFactory.java A src/main/java/org/cytoscape/model/CyRowListener.java A src/main/java/org/cytoscape/model/CyDataTableUtil.java A src/main/java/org/cytoscape/model/CyNetworkFactory.java A src/main/java/org/cytoscape/model/CyDataTable.java A src/main/java/org/cytoscape/model/CyTableManager.java A src/main/java/org/cytoscape/model/Identifiable.java A src/main/java/org/cytoscape/model/CyNode.java A src/main/java/org/cytoscape/model/CyFunction.java A src/main/java/org/cytoscape/model/subnetwork A src/main/java/org/cytoscape/model/subnetwork/CySubNetwork.java A src/main/java/org/cytoscape/model/subnetwork/CyRootNetworkFactory.java A src/main/java/org/cytoscape/model/subnetwork/CyMetaNode.java A src/main/java/org/cytoscape/model/subnetwork/CyRootNetwork.java A src/main/java/org/cytoscape/model/events A src/main/java/org/cytoscape/model/events/SelectedEdgesEvent.java A src/main/java/org/cytoscape/model/events/AboutToRemoveNodeEvent.java A src/main/java/org/cytoscape/model/events/SelectedEdgesListener.java A src/main/java/org/cytoscape/model/events/AddedNodeMicroListener.java A src/main/java/org/cytoscape/model/events/UnselectedEdgesListener.java A src/main/java/org/cytoscape/model/events/RemovedNodeEvent.java A src/main/java/org/cytoscape/model/events/AddedNodeEvent.java A src/main/java/org/cytoscape/model/events/AbstractColumnEvent.java A src/main/java/org/cytoscape/model/events/UnselectedNodesEvent.java A src/main/java/org/cytoscape/model/events/ColumnDeletedEvent.java A src/main/java/org/cytoscape/model/events/AbstractEdgeListEvent.java A src/main/java/org/cytoscape/model/events/SelectedNodesListener.java A src/main/java/org/cytoscape/model/events/RowSetListener.java A src/main/java/org/cytoscape/model/events/UnselectedNodesListener.java A src/main/java/org/cytoscape/model/events/ColumnDeletedListener.java A src/main/java/org/cytoscape/model/events/AbstractEdgeEvent.java A src/main/java/org/cytoscape/model/events/ColumnCreatedListener.java A src/main/java/org/cytoscape/model/events/UnselectedEdgesEvent.java A src/main/java/org/cytoscape/model/events/AboutToRemoveNodeListener.java A src/main/java/org/cytoscape/model/events/AbstractNodeListEvent.java A src/main/java/org/cytoscape/model/events/AbstractNodeEvent.java A src/main/java/org/cytoscape/model/events/RemovedNodeListener.java A src/main/java/org/cytoscape/model/events/AddedNodeListener.java A src/main/java/org/cytoscape/model/events/AboutToRemoveEdgeEvent.java A src/main/java/org/cytoscape/model/events/SelectedNodesEvent.java A src/main/java/org/cytoscape/model/events/RowSetEvent.java A src/main/java/org/cytoscape/model/events/AboutToRemoveEdgeListener.java A src/main/java/org/cytoscape/model/events/ColumnCreatedEvent.java A src/main/java/org/cytoscape/model/events/RemovedEdgeEvent.java A src/main/java/org/cytoscape/model/events/AddedEdgeEvent.java A src/main/java/org/cytoscape/model/events/RemovedEdgeListener.java A src/main/java/org/cytoscape/model/events/AddedEdgeListener.java A src/main/java/org/cytoscape/model/CyNetwork.java A src/main/java/org/cytoscape/model/GraphObject.java A src/main/java/org/cytoscape/model/SUIDFactory.java A src/main/javadoc A src/main/javadoc/org A src/main/javadoc/org/cytoscape A src/main/javadoc/org/cytoscape/model A src/main/javadoc/org/cytoscape/model/package.html A src/main/resources A src/main/resources/readme.txt A pom.xml At revision 21333 No emails were triggered. Parsing POMs [trunk] $ java -cp /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven-agent-1.369.jar:/R1/tools/maven/apache-maven-2.1.0/boot/classworlds-1.1.jar hudson.maven.agent.Main /R1/tools/maven/apache-maven-2.1.0 /R1/resources/webservers/tomcat_2/webapps/hudson/WEB-INF/lib/remoting-1.369.jar /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven-interceptor-1.369.jar 51967 /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven2.1-interceptor-1.2.jar <===[HUDSON REMOTING CAPACITY]===> channel started Executing Maven: -B -f <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20api/ws/trunk/pom.xml> deploy [INFO] Scanning for projects... WAGON_VERSION: 1.0-beta-2 [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.model-api [org.cytoscape.model] [INFO] task-segment: [deploy] [INFO] ------------------------------------------------------------------------ [INFO] [resources:resources] [WARNING] Using platform encoding (UTF-8 actually) to copy filtered resources, i.e. build is platform dependent! [INFO] Copying 1 resource [INFO] Copying 0 resource Downloading: http://repository.ops4j.org/maven2//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.pom [INFO] Unable to find resource 'org.cytoscape:event-api:pom:1.0-SNAPSHOT' in repository ops4j.releases (http://repository.ops4j.org/maven2/) Downloading: http://www.l2fprod.com/maven2//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.pom [INFO] Unable to find resource 'org.cytoscape:event-api:pom:1.0-SNAPSHOT' in repository l2fprod-maven-repo (http://www.l2fprod.com/maven2/) Downloading: http://repository.ops4j.org/maven2//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository ops4j.releases (http://repository.ops4j.org/maven2/) Downloading: http://www.l2fprod.com/maven2//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository l2fprod-maven-repo (http://www.l2fprod.com/maven2/) [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20api/ws/trunk/pom.xml> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Model api/modules/org.cytoscape$model-api/builds/2010-08-11_15-10-30/archive/org.cytoscape/model-api/1.0-SNAPSHOT/pom.xml [INFO] ------------------------------------------------------------------------ [ERROR] BUILD ERROR [INFO] ------------------------------------------------------------------------ [INFO] Failed to resolve artifact. Missing: ---------- 1) org.cytoscape:event-api:jar:1.0-SNAPSHOT Try downloading the file manually from the project website. Then, install it using the command: mvn install:install-file -DgroupId=org.cytoscape -DartifactId=event-api -Dversion=1.0-SNAPSHOT -Dpackaging=jar -Dfile=/path/to/file Alternatively, if you host your own repository you can deploy the file there: mvn deploy:deploy-file -DgroupId=org.cytoscape -DartifactId=event-api -Dversion=1.0-SNAPSHOT -Dpackaging=jar -Dfile=/path/to/file -Durl=[url] -DrepositoryId=[id] Path to dependency: 1) org.cytoscape:model-api:bundle:1.0-SNAPSHOT 2) org.cytoscape:event-api:jar:1.0-SNAPSHOT ---------- 1 required artifact is missing. for artifact: org.cytoscape:model-api:bundle:1.0-SNAPSHOT from the specified remote repositories: com.springsource.repository.bundles.release (http://repository.springsource.com/maven/bundles/release), com.springsource.repository.bundles.external (http://repository.springsource.com/maven/bundles/external), l2fprod-maven-repo (http://www.l2fprod.com/maven2/), Nexus (http://cytoscape.wodaklab.org/nexus/content/groups/public), ops4j.releases (http://repository.ops4j.org/maven2/) [INFO] ------------------------------------------------------------------------ [INFO] For more information, run Maven with the -e switch [INFO] ------------------------------------------------------------------------ [INFO] Total time: 13 seconds [INFO] Finished at: Wed Aug 11 15:10:45 EDT 2010 [INFO] Final Memory: 26M/219M [INFO] ------------------------------------------------------------------------ channel stopped [trunk] $ /R1/tools/maven/apache-maven-2.1.0/bin/mvn org.codehaus.sonar:sonar-maven-plugin:1.8:sonar -Dsonar.jdbc.driver=com.mysql.jdbc.Driver -Dsonar.jdbc.username=sonar -Dsonar.jdbc.password=deploysonar -Dsonar.jdbc.url=jdbc:mysql://10.20.1.18:3306/sonar -Dsonar.host.url=http://localhost:8021/sonar/ -Dsonar.skipInstall=true [INFO] Scanning for projects... WAGON_VERSION: 1.0-beta-2 [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.model-api [org.cytoscape.model] [INFO] task-segment: [org.codehaus.sonar:sonar-maven-plugin:1.8:sonar] (aggregator-style) [INFO] ------------------------------------------------------------------------ [INFO] [sonar:sonar] [INFO] Sonar host: http://localhost:8021/sonar [INFO] Sonar version: 1.8 [INFO] [sonar-core:internal] [INFO] Sonar JDBC URL: jdbc:mysql://10.20.1.18:3306/sonar [INFO] Sonar JDBC login: sonar [INFO] Sonar JDBC driver: com.mysql.jdbc.Driver [INFO] Sonar branch: [INFO] org.cytoscape.model-api [org.cytoscape.model] Selected quality profile : Cytoscape, language=java [INFO] org.cytoscape.model-api [org.cytoscape.model] Executing org.codehaus.mojo:findbugs-maven-plugin:[findbugs] [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.model-api [org.cytoscape.model] [INFO] task-segment: [org.codehaus.mojo:findbugs-maven-plugin:1.2:findbugs] [INFO] ------------------------------------------------------------------------ [INFO] Preparing findbugs:findbugs [INFO] [resources:resources] [WARNING] Using platform encoding (UTF-8 actually) to copy filtered resources, i.e. build is platform dependent! [INFO] Copying 1 resource [INFO] Copying 0 resource Downloading: http://repository.ops4j.org/maven2//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.pom [INFO] Unable to find resource 'org.cytoscape:event-api:pom:1.0-SNAPSHOT' in repository ops4j.releases (http://repository.ops4j.org/maven2/) Downloading: http://www.l2fprod.com/maven2//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.pom [INFO] Unable to find resource 'org.cytoscape:event-api:pom:1.0-SNAPSHOT' in repository l2fprod-maven-repo (http://www.l2fprod.com/maven2/) Downloading: http://repository.ops4j.org/maven2//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository ops4j.releases (http://repository.ops4j.org/maven2/) Downloading: http://www.l2fprod.com/maven2//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository l2fprod-maven-repo (http://www.l2fprod.com/maven2/) [INFO] ------------------------------------------------------------------------ [ERROR] BUILD ERROR [INFO] ------------------------------------------------------------------------ [INFO] Can not execute Sonar Embedded error: Unable to execute mojo Missing: ---------- 1) org.cytoscape:event-api:jar:1.0-SNAPSHOT Try downloading the file manually from the project website. Then, install it using the command: mvn install:install-file -DgroupId=org.cytoscape -DartifactId=event-api -Dversion=1.0-SNAPSHOT -Dpackaging=jar -Dfile=/path/to/file Alternatively, if you host your own repository you can deploy the file there: mvn deploy:deploy-file -DgroupId=org.cytoscape -DartifactId=event-api -Dversion=1.0-SNAPSHOT -Dpackaging=jar -Dfile=/path/to/file -Durl=[url] -DrepositoryId=[id] Path to dependency: 1) org.cytoscape:model-api:bundle:1.0-SNAPSHOT 2) org.cytoscape:event-api:jar:1.0-SNAPSHOT ---------- 1 required artifact is missing. for artifact: org.cytoscape:model-api:bundle:1.0-SNAPSHOT from the specified remote repositories: com.springsource.repository.bundles.release (http://repository.springsource.com/maven/bundles/release), com.springsource.repository.bundles.external (http://repository.springsource.com/maven/bundles/external), sonar (http://localhost:8021/sonar/deploy/maven), l2fprod-maven-repo (http://www.l2fprod.com/maven2/), Nexus (http://cytoscape.wodaklab.org/nexus/content/groups/public), ops4j.releases (http://repository.ops4j.org/maven2/) [INFO] ------------------------------------------------------------------------ [INFO] For more information, run Maven with the -e switch [INFO] ------------------------------------------------------------------------ [INFO] Total time: 32 seconds [INFO] Finished at: Wed Aug 11 15:11:19 EDT 2010 [INFO] Final Memory: 45M/590M [INFO] ------------------------------------------------------------------------ -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/cytoscape-cvs?hl=en.
