Author: apico
Date: 2010-09-05 16:38:05 -0700 (Sun, 05 Sep 2010)
New Revision: 21703
Added:
csplugins/trunk/ucsf/scooter/nodeCharts/src/main/java/nodeCharts/view/StripeChart.java
Modified:
csplugins/trunk/ucsf/scooter/nodeCharts/src/main/java/nodeCharts/command/NodeChartCommandHandler.java
Log:
added StripeChart support
Modified:
csplugins/trunk/ucsf/scooter/nodeCharts/src/main/java/nodeCharts/command/NodeChartCommandHandler.java
===================================================================
---
csplugins/trunk/ucsf/scooter/nodeCharts/src/main/java/nodeCharts/command/NodeChartCommandHandler.java
2010-09-05 05:55:50 UTC (rev 21702)
+++
csplugins/trunk/ucsf/scooter/nodeCharts/src/main/java/nodeCharts/command/NodeChartCommandHandler.java
2010-09-05 23:38:05 UTC (rev 21703)
@@ -58,6 +58,7 @@
// nodeChart imports
import nodeCharts.view.NodeChartViewer;
import nodeCharts.view.PieChart;
+import nodeCharts.view.StripeChart;
import nodeCharts.view.ViewUtils;
/**
@@ -88,6 +89,7 @@
// Register each command
register(new PieChart());
+ register(new StripeChart());
// Register our built-in commands
addDescription(CLEAR, "Remove all charts from a node");
Added:
csplugins/trunk/ucsf/scooter/nodeCharts/src/main/java/nodeCharts/view/StripeChart.java
===================================================================
---
csplugins/trunk/ucsf/scooter/nodeCharts/src/main/java/nodeCharts/view/StripeChart.java
(rev 0)
+++
csplugins/trunk/ucsf/scooter/nodeCharts/src/main/java/nodeCharts/view/StripeChart.java
2010-09-05 23:38:05 UTC (rev 21703)
@@ -0,0 +1,125 @@
+/* vim: set ts=2: */
+/**
+ * Copyright (c) 2010 The Regents of the University of California.
+ * All rights reserved.
+ *
+ * Redistribution and use in source and binary forms, with or without
+ * modification, are permitted provided that the following conditions
+ * are met:
+ * 1. Redistributions of source code must retain the above copyright
+ * notice, this list of conditions, and the following disclaimer.
+ * 2. Redistributions in binary form must reproduce the above
+ * copyright notice, this list of conditions, and the following
+ * disclaimer in the documentation and/or other materials provided
+ * with the distribution.
+ * 3. Redistributions must acknowledge that this software was
+ * originally developed by the UCSF Computer Graphics Laboratory
+ * under support by the NIH National Center for Research Resources,
+ * grant P41-RR01081.
+ *
+ * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDER "AS IS" AND ANY
+ * EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+ * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
+ * PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE REGENTS BE LIABLE
+ * FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
+ * CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT
+ * OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR
+ * BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
+ * WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE
+ * OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE,
+ * EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+ *
+ */
+package nodeCharts.view;
+
+// System imports
+import java.awt.Color;
+import java.awt.Shape;
+import java.awt.geom.Arc2D;
+import java.awt.geom.Area;
+import java.awt.geom.Point2D;
+import java.awt.geom.Rectangle2D;
+import java.util.ArrayList;
+import java.util.HashMap;
+import java.util.List;
+import java.util.Map;
+
+import nodeCharts.command.ValueUtils;
+import nodeCharts.view.ViewUtils.TextAlignment;
+import cytoscape.CyNode;
+import cytoscape.command.CyCommandException;
+import cytoscape.render.stateful.CustomGraphic;
+import cytoscape.render.stateful.PaintFactory;
+import cytoscape.view.CyNetworkView;
+
+/**
+ * The StripeChart creates a list of custom graphics where each custom graphic
+ * represents a stripe of an evenly divided, horizontally-oriented rectangle.
+ * The data for this is a simple list of colors (named Java colors, hex RGB
+ * values, or hex RGBA values).
+ */
+public class StripeChart implements NodeChartViewer {
+ private static final String COLORS = "colorlist";
+ // TODO
+// private static final String LABELFONT = "labelfont";
+// private static final String LABELSTYLE = "labelstyle";
+// private static final String LABELSIZE = "labelsize";
+// private static final String LABELOFFSET = "labeloffset";
+
+ public String getName() {
+ return "stripe";
+ }
+
+ public String getDescription() {
+ return "Display the values passed as equally distributed
stripes on the node";
+ }
+
+ public Map<String, String> getOptions() {
+ Map<String, String> options = new HashMap<String, String>();
+ options.put(COLORS, "");
+ return options;
+ }
+
+ public List<CustomGraphic> getCustomGraphics(Map<String, Object> args,
List<Double> values, List<String> labels, CyNode node,
+ CyNetworkView view, Object position) throws
CyCommandException {
+ // Get our colors
+ List<Color> colors =
ValueUtils.convertInputToColor(args.get(COLORS),
+ args.size());
+
+
+ int nStripes = colors.size();
+
+ List<CustomGraphic> cgList = new ArrayList<CustomGraphic>();
+
+ // We need to get our bounding box in order to scale our graphic
+ // properly
+ Rectangle2D bbox = ViewUtils.getNodeBoundingBox(node, view,
position);
+
+ // System.out.println("Node: "+node);
+
+ for (int stripe = 0; stripe < nStripes; stripe++) {
+ CustomGraphic cg = createStripe(bbox, stripe, nStripes,
colors.get(stripe), view);
+ cgList.add(cg);
+ }
+
+ return cgList;
+ }
+
+
+ private CustomGraphic createStripe(Rectangle2D bbox, int i, int n,
Color color, CyNetworkView view) {
+ CustomGraphic val;
+ // System.out.println("Creating arc from "+arcStart+" to
"+(arc.doubleValue()+arcStart)+" with color: "+color);
+ double x = bbox.getX();
+ double y = bbox.getY();
+ double width = bbox.getWidth();
+ double height = bbox.getHeight();
+ // Create the stripe
+ Rectangle2D stripe = new Rectangle2D.Double((x + (i *
width/n)), y, width/n, height);
+
+ // Create the paint factory
+ PaintFactory pf = new DefaultPaintFactory(color);
+ val = new CustomGraphic(stripe, pf);
+
+ return val;
+ }
+}
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