See <http://cytoscape.wodaklab.org/hudson/job/Cy3%20IO%20impl/1475/changes>

Changes:

[mes] changes to support the concept of primary key in CyDataTable

------------------------------------------
[...truncated 126 lines...]
A         
src/main/java/org/cytoscape/io/internal/read/xgmml/handler/HandleRDFDescription.java
A         
src/main/java/org/cytoscape/io/internal/read/xgmml/handler/HandleEdgeHandle.java
A         
src/main/java/org/cytoscape/io/internal/read/xgmml/handler/AttributeValueUtil.java
A         
src/main/java/org/cytoscape/io/internal/read/AbstractDataTableReader.java
A         src/main/java/org/cytoscape/io/internal/read/GenericReaderManager.java
A         
src/main/java/org/cytoscape/io/internal/read/AbstractNetworkViewReader.java
A         src/main/java/org/cytoscape/io/internal/read/VisualStyleBuilder.java
A         
src/main/java/org/cytoscape/io/internal/read/CyDataTableReaderManagerImpl.java
A         src/main/java/org/cytoscape/io/internal/util
A         src/main/java/org/cytoscape/io/internal/util/StreamUtilImpl.java
A         src/main/java/org/cytoscape/io/internal/util/ReadUtils.java
A         src/main/resources
A         src/main/resources/META-INF
A         src/main/resources/META-INF/spring
A         src/main/resources/META-INF/spring/bundle-context-osgi.xml
A         src/main/resources/META-INF/spring/bundle-context.xml
A         pom.xml
At revision 21709
No emails were triggered.
Parsing POMs
[trunk] $ java -cp 
/R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven-agent-1.369.jar:/R1/tools/maven/apache-maven-2.1.0/boot/classworlds-1.1.jar
 hudson.maven.agent.Main /R1/tools/maven/apache-maven-2.1.0 
/R1/resources/webservers/tomcat_2/webapps/hudson/WEB-INF/lib/remoting-1.369.jar 
/R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven-interceptor-1.369.jar
 47034 
/R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven2.1-interceptor-1.2.jar
<===[HUDSON REMOTING CAPACITY]===>   channel started
Executing Maven:  -B -f 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20IO%20impl/ws/trunk/pom.xml> 
deploy
[INFO] Scanning for projects...
WAGON_VERSION: 1.0-beta-2
[INFO] ------------------------------------------------------------------------
[INFO] Building org.cytoscape.io-impl [org.cytoscape.io]
[INFO]    task-segment: [deploy]
[INFO] ------------------------------------------------------------------------
[INFO] [resources:resources]
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 2 resources
[INFO] Copying 0 resource
[INFO] [pax:compile]
[INFO] Compiling 71 source files to 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20IO%20impl/ws/trunk/target/classes>
[INFO] [recovering meta-data]
[HUDSON] Archiving 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20IO%20impl/ws/trunk/pom.xml> to 
/R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 IO 
impl/modules/org.cytoscape$io-impl/builds/2010-09-05_20-07-23/archive/org.cytoscape/io-impl/1.0-SNAPSHOT/pom.xml
[INFO] ------------------------------------------------------------------------
[ERROR] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Compilation failure

<http://cytoscape.wodaklab.org/hudson/job/Cy3%20IO%20impl/ws/trunk/src/main/java/org/cytoscape/io/internal/read/expression/ExpressionData.java>:[1071,20]
 getRow(long) in org.cytoscape.model.CyDataTable cannot be applied to 
(java.lang.String)

<http://cytoscape.wodaklab.org/hudson/job/Cy3%20IO%20impl/ws/trunk/src/main/java/org/cytoscape/io/internal/read/datatable/TextDataTableReader.java>:[71,40]
 createTable(java.lang.String,boolean) in 
org.cytoscape.model.CyDataTableFactory cannot be applied to 
(java.lang.String,java.lang.String,java.lang.Class<java.lang.String>,boolean)

<http://cytoscape.wodaklab.org/hudson/job/Cy3%20IO%20impl/ws/trunk/src/main/java/org/cytoscape/io/internal/read/datatable/TextDataTableReader.java>:[107,19]
 getRow(long) in org.cytoscape.model.CyDataTable cannot be applied to 
(java.lang.String)


[INFO] ------------------------------------------------------------------------
[INFO] For more information, run Maven with the -e switch
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 7 seconds
[INFO] Finished at: Sun Sep 05 20:07:32 EDT 2010
[INFO] Final Memory: 53M/600M
[INFO] ------------------------------------------------------------------------
Sending e-mails to: [email protected]
channel stopped
[trunk] $ /R1/tools/maven/apache-maven-2.1.0/bin/mvn 
org.codehaus.sonar:sonar-maven-plugin:1.8:sonar 
-Dsonar.jdbc.driver=com.mysql.jdbc.Driver -Dsonar.jdbc.username=sonar 
-Dsonar.jdbc.password=deploysonar 
-Dsonar.jdbc.url=jdbc:mysql://localhost:3306/sonar 
-Dsonar.host.url=http://localhost:8021/sonar/ -Dsonar.skipInstall=true
[INFO] Scanning for projects...
WAGON_VERSION: 1.0-beta-2
[INFO] ------------------------------------------------------------------------
[INFO] Building org.cytoscape.io-impl [org.cytoscape.io]
[INFO]    task-segment: [org.codehaus.sonar:sonar-maven-plugin:1.8:sonar] 
(aggregator-style)
[INFO] ------------------------------------------------------------------------
[INFO] [sonar:sonar]
[INFO] Sonar host: http://localhost:8021/sonar
[INFO] Sonar version: 2.2
[INFO] [sonar-core:internal]
[INFO]  Database dialect class org.sonar.api.database.dialect.MySql
[INFO]  -------------  Analyzing org.cytoscape.io-impl [org.cytoscape.io]
[INFO]  Selected quality profile : Cytoscape, language=java
[INFO]  Configure maven plugins...
[INFO]  Sensor JavaSourceImporter...
[INFO]  Sensor JavaSourceImporter done: 543 ms
[INFO]  Sensor AsynchronousMeasuresSensor...
[INFO]  Sensor AsynchronousMeasuresSensor done: 31 ms
[INFO]  Sensor SquidSensor...
[INFO]  Java AST scan...
[INFO]  Java AST scan done: 3915 ms
[INFO]  Java bytecode scan...
[WARN]  Class 'org/cytoscape/io/internal/write/graphics/PDFExporter' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/datatable/TextDataTableReader' is 
not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleGraph' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/write/graphics/Exporter' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/sif/Interaction' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/expression/mRNAMeasurement' is 
not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/RDFTags' is not accessible 
through the ClassLoader.
[WARN]  Class 
'org/cytoscape/io/internal/read/xgmml/handler/HandleMapAttributeDone' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleGraph' is not 
accessible through the ClassLoader.
[WARN]  Class 
'org/cytoscape/io/internal/read/xgmml/handler/HandleNetworkAttribute' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleNodeGraphics' 
is not accessible through the ClassLoader.
[WARN]  Class 
'org/cytoscape/io/internal/read/xgmml/handler/HandleNodeAttribute' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleNodeGraphics' 
is not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleGroupNode' is 
not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleEdge' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleEdge' is not 
accessible through the ClassLoader.
[WARN]  Class 
'org/cytoscape/io/internal/read/xgmml/handler/HandleEdgeAttribute' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleEdgeGraphics' 
is not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleEdgeGraphics' 
is not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleEdgeHandle' 
is not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleEdgeHandle' 
is not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleMapAttribute' 
is not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleRDFType' is 
not accessible through the ClassLoader.
[WARN]  Class 
'org/cytoscape/io/internal/read/xgmml/handler/HandleRDFDescription' is not 
accessible through the ClassLoader.
[WARN]  Class 
'org/cytoscape/io/internal/read/xgmml/handler/HandleRDFIdentifier' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleRDFDate' is 
not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleRDFTitle' is 
not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleRDFSource' is 
not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleRDFFormat' is 
not accessible through the ClassLoader.
[WARN]  Class 
'org/cytoscape/io/internal/read/xgmml/handler/HandleEdgeHandleDone' is not 
accessible through the ClassLoader.
[WARN]  Class 
'org/cytoscape/io/internal/read/xgmml/handler/HandleEdgeHandleList' is not 
accessible through the ClassLoader.
[WARN]  Class 
'org/cytoscape/io/internal/read/xgmml/handler/HandleComplexAttributeDone' is 
not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleGraphDone' is 
not accessible through the ClassLoader.
[WARN]  Class 
'org/cytoscape/io/internal/read/xgmml/handler/HandleMapAttributeDone' is not 
accessible through the ClassLoader.
[WARN]  Class 
'org/cytoscape/io/internal/read/xgmml/handler/HandleEdgeAttribute' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/AbstractNetworkViewReader' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/CyFileFilterImpl' is not accessible 
through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/gml/KeyValue' is not accessible 
through the ClassLoader.
[WARN]  Class 
'org/cytoscape/io/internal/read/xgmml/handler/HandleComplexAttributeDone' is 
not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleRDFFormat' is 
not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleRDFType' is 
not accessible through the ClassLoader.
[WARN]  Class '[Lorg/cytoscape/io/internal/read/xgmml/ParseState;' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleNodeGraphics' 
is not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/write/graphics/BitmapExporter' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/AbstractDataTableReader' is not 
accessible through the ClassLoader.
[WARN]  Class '[Lorg/cytoscape/io/internal/read/xgmml/ObjectType;' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/gml/GMLParser' is not accessible 
through the ClassLoader.
[WARN]  Class 
'org/cytoscape/io/internal/read/xgmml/handler/HandleRDFDescription' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/sif/SIFNetworkViewReaderFactory' 
is not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleRDFTitle' is 
not accessible through the ClassLoader.
[WARN]  Class 
'org/cytoscape/io/internal/read/xgmml/handler/HandleNetworkAttribute' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/XGMMLNetworkViewReader' is 
not accessible through the ClassLoader.
[WARN]  Class 
'org/cytoscape/io/internal/read/gml/GMLParser$FilterNewlineReader' is not 
accessible through the ClassLoader.
[WARN]  Class 
'org/cytoscape/io/internal/read/xgmml/handler/HandleEdgeHandleList' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/GenericReaderManager' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/CyDataTableReaderManagerImpl' is 
not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/expression/ExpressionData' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/write/graphics/SVGExporter' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleRDFDate' is 
not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/XGMMLFileFilter' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleEdge' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleRDFSource' is 
not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleGraphDone' is 
not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleEdgeHandle' 
is not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/util/StreamUtilImpl' is not accessible 
through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleGroupNode' is 
not accessible through the ClassLoader.
[WARN]  Class 
'org/cytoscape/io/internal/read/xgmml/handler/HandleNodeAttribute' is not 
accessible through the ClassLoader.
[WARN]  Class 
'org/cytoscape/io/internal/read/xgmml/XGMMLNetworkViewReaderFactory' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/write/sif/InteractionWriter' is not 
accessible through the ClassLoader.
[WARN]  Class 
'org/cytoscape/io/internal/read/datatable/TextDataTableReaderFactory' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/CyNetworkViewReaderManagerImpl' 
is not accessible through the ClassLoader.
[WARN]  Class 
'org/cytoscape/io/internal/read/xgmml/handler/HandleRDFIdentifier' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleEdgeGraphics' 
is not accessible through the ClassLoader.
[WARN]  Class 
'org/cytoscape/io/internal/read/xgmml/handler/HandleEdgeHandleDone' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleMapAttribute' 
is not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/write/graphics/PSExporter' is not 
accessible through the ClassLoader.
[WARN]  Class '[Lorg/cytoscape/io/internal/read/xgmml/MetadataEntries;' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/sif/SIFNetworkViewReader' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/write/graphics/PDFExporter' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/datatable/TextDataTableReader' is 
not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleGraph' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/write/graphics/Exporter' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/sif/Interaction' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/expression/mRNAMeasurement' is 
not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/RDFTags' is not accessible 
through the ClassLoader.
[WARN]  Class 
'org/cytoscape/io/internal/read/xgmml/handler/HandleMapAttributeDone' is not 
accessible through the ClassLoader.
[WARN]  Class 
'org/cytoscape/io/internal/read/xgmml/handler/HandleEdgeAttribute' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/AbstractNetworkViewReader' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/CyFileFilterImpl' is not accessible 
through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/gml/KeyValue' is not accessible 
through the ClassLoader.
[WARN]  Class 
'org/cytoscape/io/internal/read/xgmml/handler/HandleComplexAttributeDone' is 
not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleRDFFormat' is 
not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleRDFType' is 
not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleNodeGraphics' 
is not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/write/graphics/BitmapExporter' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/AbstractDataTableReader' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/gml/GMLParser' is not accessible 
through the ClassLoader.
[WARN]  Class 
'org/cytoscape/io/internal/read/xgmml/handler/HandleRDFDescription' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/sif/SIFNetworkViewReaderFactory' 
is not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleRDFTitle' is 
not accessible through the ClassLoader.
[WARN]  Class 
'org/cytoscape/io/internal/read/xgmml/handler/HandleNetworkAttribute' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/XGMMLNetworkViewReader' is 
not accessible through the ClassLoader.
[WARN]  Class 
'org/cytoscape/io/internal/read/gml/GMLParser$FilterNewlineReader' is not 
accessible through the ClassLoader.
[WARN]  Class 
'org/cytoscape/io/internal/read/xgmml/handler/HandleEdgeHandleList' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/GenericReaderManager' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/CyDataTableReaderManagerImpl' is 
not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/expression/ExpressionData' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/write/graphics/SVGExporter' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleRDFDate' is 
not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/XGMMLFileFilter' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleEdge' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleRDFSource' is 
not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleGraphDone' is 
not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleEdgeHandle' 
is not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/util/StreamUtilImpl' is not accessible 
through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleGroupNode' is 
not accessible through the ClassLoader.
[WARN]  Class 
'org/cytoscape/io/internal/read/xgmml/handler/HandleNodeAttribute' is not 
accessible through the ClassLoader.
[WARN]  Class 
'org/cytoscape/io/internal/read/xgmml/XGMMLNetworkViewReaderFactory' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/write/sif/InteractionWriter' is not 
accessible through the ClassLoader.
[WARN]  Class 
'org/cytoscape/io/internal/read/datatable/TextDataTableReaderFactory' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/CyNetworkViewReaderManagerImpl' 
is not accessible through the ClassLoader.
[WARN]  Class 
'org/cytoscape/io/internal/read/xgmml/handler/HandleRDFIdentifier' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleEdgeGraphics' 
is not accessible through the ClassLoader.
[WARN]  Class 
'org/cytoscape/io/internal/read/xgmml/handler/HandleEdgeHandleDone' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/xgmml/handler/HandleMapAttribute' 
is not accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/write/graphics/PSExporter' is not 
accessible through the ClassLoader.
[WARN]  Class 'org/cytoscape/io/internal/read/sif/SIFNetworkViewReader' is not 
accessible through the ClassLoader.
[INFO]  Java bytecode scan done: 131 ms
[INFO]  Squid extraction...
[INFO]  Package design analysis...
[INFO]  Package design analysis done: 50 ms
[INFO]  Squid extraction done: 1266 ms
[INFO]  Sensor SquidSensor done: 5398 ms
[INFO]  Sensor ProfileSensor...
[INFO]  Sensor ProfileSensor done: 25 ms
[INFO]  Sensor ProjectLinksSensor...
[INFO]  Sensor ProjectLinksSensor done: 4 ms
[INFO]  Sensor VersionEventsSensor...
[INFO]  Sensor VersionEventsSensor done: 37 ms
[INFO]  Sensor Maven dependencies...
[INFO]  Sensor Maven dependencies done: 333 ms
[INFO]  Execute maven plugin findbugs-maven-plugin...
[INFO] ------------------------------------------------------------------------
[INFO] Building org.cytoscape.io-impl [org.cytoscape.io]
[INFO]    task-segment: [org.codehaus.mojo:findbugs-maven-plugin:2.3.1:findbugs]
[INFO] ------------------------------------------------------------------------
[INFO] Preparing findbugs:findbugs
[INFO] [resources:resources]
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 2 resources
[INFO] Copying 0 resource
[INFO] [pax:compile]
[INFO] Compiling 48 source files to 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20IO%20impl/ws/trunk/target/classes>
[INFO] [recovering meta-data]
[INFO] ------------------------------------------------------------------------
[ERROR] BUILD ERROR
[INFO] ------------------------------------------------------------------------
[INFO] Can not execute Sonar

Embedded error: Unable to execute maven plugin
Compilation failure
[INFO] ------------------------------------------------------------------------
[INFO] For more information, run Maven with the -e switch
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 17 seconds
[INFO] Finished at: Sun Sep 05 20:08:00 EDT 2010
[INFO] Final Memory: 74M/728M
[INFO] ------------------------------------------------------------------------

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