See <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/1462/changes>
Changes: [mes] Changed CyDataTable name to CyTable ------------------------------------------ [...truncated 97 lines...] A src/main/java/org/cytoscape/task/internal/zoom/FitContentTaskFactory.java A src/main/java/org/cytoscape/task/internal/zoom/AbstractZoomTask.java A src/main/java/org/cytoscape/task/internal/zoom/FitSelectedTask.java A src/main/java/org/cytoscape/task/internal/zoom/ZoomInTask.java A src/main/java/org/cytoscape/task/internal/hide A src/main/java/org/cytoscape/task/internal/hide/UnHideAllEdgesTask.java A src/main/java/org/cytoscape/task/internal/hide/UnHideAllTaskFactory.java A src/main/java/org/cytoscape/task/internal/hide/UnHideAllNodesTask.java A src/main/java/org/cytoscape/task/internal/hide/HideSelectedEdgesTaskFactory.java A src/main/java/org/cytoscape/task/internal/hide/HideSelectedTask.java A src/main/java/org/cytoscape/task/internal/hide/HideSelectedNodesTaskFactory.java A src/main/java/org/cytoscape/task/internal/hide/UnHideAllEdgesTaskFactory.java A src/main/java/org/cytoscape/task/internal/hide/UnHideAllTask.java A src/main/java/org/cytoscape/task/internal/hide/UnHideAllNodesTaskFactory.java A src/main/java/org/cytoscape/task/internal/hide/HideUtils.java A src/main/java/org/cytoscape/task/internal/hide/HideSelectedEdgesTask.java A src/main/java/org/cytoscape/task/internal/hide/HideSelectedTaskFactory.java A src/main/java/org/cytoscape/task/internal/hide/HideSelectedNodesTask.java A src/main/java/org/cytoscape/task/internal/loadnetwork A src/main/java/org/cytoscape/task/internal/loadnetwork/LoadNetworkURLTask.java A src/main/java/org/cytoscape/task/internal/loadnetwork/AbstractLoadNetworkTask.java A src/main/java/org/cytoscape/task/internal/loadnetwork/LoadNetworkFileTaskFactoryImpl.java A src/main/java/org/cytoscape/task/internal/loadnetwork/LoadNetworkURLTaskFactoryImpl.java A src/main/java/org/cytoscape/task/internal/loadnetwork/SetCurrentNetworkTask.java A src/main/java/org/cytoscape/task/internal/loadnetwork/LoadNetworkFileTask.java A src/main/java/org/cytoscape/task/internal/setcurrent A src/main/java/org/cytoscape/task/internal/setcurrent/SetCurrentNetworkTaskFactoryImpl.java A src/main/java/org/cytoscape/task/internal/setcurrent/SetCurrentNetworkTask.java A src/main/resources A src/main/resources/META-INF A src/main/resources/META-INF/spring A src/main/resources/META-INF/spring/bundle-context-osgi.xml A src/main/resources/META-INF/spring/bundle-context.xml A pom.xml At revision 21773 No emails were triggered. Parsing POMs [trunk] $ java -cp /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven-agent-1.369.jar:/R1/tools/maven/apache-maven-2.1.0/boot/classworlds-1.1.jar hudson.maven.agent.Main /R1/tools/maven/apache-maven-2.1.0 /R1/resources/webservers/tomcat_2/webapps/hudson/WEB-INF/lib/remoting-1.369.jar /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven-interceptor-1.369.jar 38607 /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven2.1-interceptor-1.2.jar <===[HUDSON REMOTING CAPACITY]===> channel started Executing Maven: -B -f <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/pom.xml> deploy [INFO] Scanning for projects... WAGON_VERSION: 1.0-beta-2 [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.core-task-impl [INFO] task-segment: [deploy] [INFO] ------------------------------------------------------------------------ [INFO] [resources:resources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 2 resources [INFO] Copying 0 resource [INFO] [pax:compile] [INFO] Compiling 92 source files to <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/target/classes> [INFO] [recovering meta-data] [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/pom.xml> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Core Task Implementation/modules/org.cytoscape$core-task-impl/builds/2010-09-09_13-08-30/archive/org.cytoscape/core-task-impl/1.0-SNAPSHOT/pom.xml [INFO] ------------------------------------------------------------------------ [ERROR] BUILD FAILURE [INFO] ------------------------------------------------------------------------ [INFO] Compilation failure <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/loaddatatable/LoadDataTableTask.java>:[9,26] cannot find symbol symbol : class CyTable location: package org.cytoscape.model <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/loaddatatable/LoadDataTableTask.java>:[10,28] cannot find symbol symbol : class CyTableReaderManager location: package org.cytoscape.io.read <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/loaddatatable/LoadDataTableTask.java>:[11,28] cannot find symbol symbol : class CyTableReader location: package org.cytoscape.io.read <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/loaddatatable/LoadDataTableTask.java>:[22,9] cannot find symbol symbol : class CyTableReader location: class org.cytoscape.task.internal.loaddatatable.LoadDataTableTask <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/loaddatatable/LoadDataTableTask.java>:[23,15] cannot find symbol symbol : class CyTableReaderManager location: class org.cytoscape.task.internal.loaddatatable.LoadDataTableTask <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/loaddatatable/LoadDataTableTask.java>:[25,32] cannot find symbol symbol : class CyTableReaderManager location: class org.cytoscape.task.internal.loaddatatable.LoadDataTableTask <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/loaddatatable/LoadDataTableTask.java>:[53,15] cannot find symbol symbol : class CyTableReader location: class org.cytoscape.task.internal.loaddatatable.FinalStatusMessageUpdateTask <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/loaddatatable/LoadDataTableTask.java>:[55,36] cannot find symbol symbol : class CyTableReader location: class org.cytoscape.task.internal.loaddatatable.FinalStatusMessageUpdateTask <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/creation/NewNetworkSelectedNodesOnlyTask.java>:[49,26] cannot find symbol symbol : class CyTableUtil location: package org.cytoscape.model <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/select/SelectConnectedNodesTask.java>:[44,26] cannot find symbol symbol : class CyTableUtil location: package org.cytoscape.model <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/select/SelectFirstNeighborsTask.java>:[38,26] cannot find symbol symbol : class CyTableUtil location: package org.cytoscape.model <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/hide/HideSelectedEdgesTask.java>:[42,26] cannot find symbol symbol : class CyTableUtil location: package org.cytoscape.model <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/select/SelectAdjacentEdgesTask.java>:[43,26] cannot find symbol symbol : class CyTableUtil location: package org.cytoscape.model <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/hide/HideSelectedTask.java>:[42,26] cannot find symbol symbol : class CyTableUtil location: package org.cytoscape.model <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/loaddatatable/LoadDataTableTaskFactoryImpl.java>:[4,28] cannot find symbol symbol : class CyTableReaderManager location: package org.cytoscape.io.read <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/loaddatatable/LoadDataTableTaskFactoryImpl.java>:[10,9] cannot find symbol symbol : class CyTableReaderManager location: class org.cytoscape.task.internal.loaddatatable.LoadDataTableTaskFactoryImpl <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/loaddatatable/LoadDataTableTaskFactoryImpl.java>:[12,37] cannot find symbol symbol : class CyTableReaderManager location: class org.cytoscape.task.internal.loaddatatable.LoadDataTableTaskFactoryImpl <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/session/OpenSessionTask.java>:[38,28] cannot find symbol symbol : class CyTableReader location: package org.cytoscape.io.read <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/hide/HideSelectedNodesTask.java>:[42,26] cannot find symbol symbol : class CyTableUtil location: package org.cytoscape.model <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/creation/NewNetworkSelectedNodesEdgesTask.java>:[46,26] cannot find symbol symbol : class CyTableUtil location: package org.cytoscape.model <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/loaddatatable/LoadDataTableTask.java>:[60,7] cannot find symbol symbol : class CyTable location: class org.cytoscape.task.internal.loaddatatable.FinalStatusMessageUpdateTask <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/creation/NewNetworkSelectedNodesOnlyTask.java>:[98,23] cannot find symbol symbol : variable CyTableUtil location: class org.cytoscape.task.internal.creation.NewNetworkSelectedNodesOnlyTask <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/select/SelectConnectedNodesTask.java>:[61,37] cannot find symbol symbol : variable CyTableUtil location: class org.cytoscape.task.internal.select.SelectConnectedNodesTask <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/select/SelectFirstNeighborsTask.java>:[57,37] cannot find symbol symbol : variable CyTableUtil location: class org.cytoscape.task.internal.select.SelectFirstNeighborsTask <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/hide/HideSelectedEdgesTask.java>:[59,37] cannot find symbol symbol : variable CyTableUtil location: class org.cytoscape.task.internal.hide.HideSelectedEdgesTask <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/select/SelectAdjacentEdgesTask.java>:[63,20] cannot find symbol symbol : variable CyTableUtil location: class org.cytoscape.task.internal.select.SelectAdjacentEdgesTask <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/hide/HideSelectedTask.java>:[59,37] cannot find symbol symbol : variable CyTableUtil location: class org.cytoscape.task.internal.hide.HideSelectedTask <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/hide/HideSelectedTask.java>:[60,37] cannot find symbol symbol : variable CyTableUtil location: class org.cytoscape.task.internal.hide.HideSelectedTask <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/session/OpenSessionTask.java>:[79,2] cannot find symbol symbol : class CyTableReader location: class org.cytoscape.task.internal.session.OpenSessionTask <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/hide/HideSelectedNodesTask.java>:[58,37] cannot find symbol symbol : variable CyTableUtil location: class org.cytoscape.task.internal.hide.HideSelectedNodesTask [INFO] ------------------------------------------------------------------------ [INFO] For more information, run Maven with the -e switch [INFO] ------------------------------------------------------------------------ [INFO] Total time: 5 seconds [INFO] Finished at: Thu Sep 09 13:08:38 EDT 2010 [INFO] Final Memory: 46M/492M [INFO] ------------------------------------------------------------------------ Sending e-mails to: [email protected] channel stopped [trunk] $ /R1/tools/maven/apache-maven-2.1.0/bin/mvn org.codehaus.sonar:sonar-maven-plugin:1.8:sonar -Dsonar.jdbc.driver=com.mysql.jdbc.Driver -Dsonar.jdbc.username=sonar -Dsonar.jdbc.password=deploysonar -Dsonar.jdbc.url=jdbc:mysql://localhost:3306/sonar -Dsonar.host.url=http://localhost:8021/sonar/ -Dsonar.skipInstall=true [INFO] Scanning for projects... WAGON_VERSION: 1.0-beta-2 [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.core-task-impl [INFO] task-segment: [org.codehaus.sonar:sonar-maven-plugin:1.8:sonar] (aggregator-style) [INFO] ------------------------------------------------------------------------ [INFO] [sonar:sonar] [INFO] Sonar host: http://localhost:8021/sonar [INFO] Sonar version: 2.2 [INFO] [sonar-core:internal] [INFO] Database dialect class org.sonar.api.database.dialect.MySql [INFO] ------------- Analyzing org.cytoscape.core-task-impl [INFO] Selected quality profile : Cytoscape, language=java [INFO] Configure maven plugins... [INFO] Sensor JavaSourceImporter... [INFO] Sensor JavaSourceImporter done: 2289 ms [INFO] Sensor AsynchronousMeasuresSensor... [INFO] Sensor AsynchronousMeasuresSensor done: 35 ms [INFO] Sensor SquidSensor... [INFO] Java AST scan... [INFO] Java AST scan done: 1898 ms [INFO] Squid extraction... [INFO] Squid extraction done: 835 ms [INFO] Sensor SquidSensor done: 2795 ms [INFO] Sensor ProfileSensor... [INFO] Sensor ProfileSensor done: 25 ms [INFO] Sensor ProjectLinksSensor... [INFO] Sensor ProjectLinksSensor done: 4 ms [INFO] Sensor VersionEventsSensor... [INFO] Sensor VersionEventsSensor done: 37 ms [INFO] Sensor Maven dependencies... [INFO] Sensor Maven dependencies done: 125 ms [INFO] Execute maven plugin findbugs-maven-plugin... [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.core-task-impl [INFO] task-segment: [org.codehaus.mojo:findbugs-maven-plugin:2.3.1:findbugs] [INFO] ------------------------------------------------------------------------ [INFO] Preparing findbugs:findbugs [INFO] [resources:resources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 2 resources [INFO] Copying 0 resource [INFO] [pax:compile] [INFO] Compiling 92 source files to <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/target/classes> [INFO] [recovering meta-data] [INFO] ------------------------------------------------------------------------ [ERROR] BUILD ERROR [INFO] ------------------------------------------------------------------------ [INFO] Can not execute Sonar Embedded error: Unable to execute maven plugin Compilation failure [INFO] ------------------------------------------------------------------------ [INFO] For more information, run Maven with the -e switch [INFO] ------------------------------------------------------------------------ [INFO] Total time: 15 seconds [INFO] Finished at: Thu Sep 09 13:09:04 EDT 2010 [INFO] Final Memory: 68M/725M [INFO] ------------------------------------------------------------------------ -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. 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