See <http://cytoscape.wodaklab.org/hudson/job/Cy3%20IO%20api/2186/changes>
Changes: [mes] Changed CyDataTable name to CyTable ------------------------------------------ Started by an SCM change Checking out http://chianti.ucsd.edu/svn/core3/io-api/trunk A osgi.bnd A src A src/test A src/test/java A src/test/resources A src/main A src/main/java A src/main/java/org A src/main/java/org/cytoscape A src/main/java/org/cytoscape/io A src/main/java/org/cytoscape/io/FileIOFactory.java A src/main/java/org/cytoscape/io/CyFileFilter.java A src/main/java/org/cytoscape/io/DataCategory.java A src/main/java/org/cytoscape/io/write A src/main/java/org/cytoscape/io/write/CyWriterFactory.java A src/main/java/org/cytoscape/io/write/graphics A src/main/java/org/cytoscape/io/write/graphics/CyVectorGraphicsWriterFactory.java A src/main/java/org/cytoscape/io/write/graphics/CyBitmapGraphicsWriter.java A src/main/java/org/cytoscape/io/write/graphics/CyVectorGraphicsWriter.java A src/main/java/org/cytoscape/io/write/graphics/CyBitmapGraphicsWriterFactory.java A src/main/java/org/cytoscape/io/write/CyWriterManager.java A src/main/java/org/cytoscape/io/write/CyWriter.java A src/main/java/org/cytoscape/io/read A src/main/java/org/cytoscape/io/read/CyTableReaderManager.java A src/main/java/org/cytoscape/io/read/CyNetworkViewReader.java A src/main/java/org/cytoscape/io/read/CyTableReader.java A src/main/java/org/cytoscape/io/read/InputStreamTaskFactory.java A src/main/java/org/cytoscape/io/read/CyNetworkViewReaderManager.java A src/main/java/org/cytoscape/io/util A src/main/java/org/cytoscape/io/util/StreamUtil.java A src/main/resources A src/main/resources/META-INF A pom.xml At revision 21773 Deleting old artifacts from #2184 No emails were triggered. Parsing POMs [trunk] $ java -cp /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven-agent-1.369.jar:/R1/tools/maven/apache-maven-2.1.0/boot/classworlds-1.1.jar hudson.maven.agent.Main /R1/tools/maven/apache-maven-2.1.0 /R1/resources/webservers/tomcat_2/webapps/hudson/WEB-INF/lib/remoting-1.369.jar /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven-interceptor-1.369.jar 60626 /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven2.1-interceptor-1.2.jar <===[HUDSON REMOTING CAPACITY]===> channel started Executing Maven: -B -f <http://cytoscape.wodaklab.org/hudson/job/Cy3%20IO%20api/ws/trunk/pom.xml> deploy [INFO] Scanning for projects... WAGON_VERSION: 1.0-beta-2 [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.io-api [org.cytoscape.io] [INFO] task-segment: [deploy] [INFO] ------------------------------------------------------------------------ [INFO] [resources:resources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 0 resource [INFO] Copying 0 resource Downloading: http://maven.springframework.org/osgi/org/cytoscape/vizmap-api/1.0-SNAPSHOT/vizmap-api-1.0-SNAPSHOT.pom [INFO] Unable to find resource 'org.cytoscape:vizmap-api:pom:1.0-SNAPSHOT' in repository spring-osgified-artifacts (http://maven.springframework.org/osgi) Downloading: http://repository.ops4j.org/maven2//org/cytoscape/vizmap-api/1.0-SNAPSHOT/vizmap-api-1.0-SNAPSHOT.pom [INFO] Unable to find resource 'org.cytoscape:vizmap-api:pom:1.0-SNAPSHOT' in repository ops4j.releases (http://repository.ops4j.org/maven2/) Downloading: http://www.l2fprod.com/maven2//org/cytoscape/vizmap-api/1.0-SNAPSHOT/vizmap-api-1.0-SNAPSHOT.pom [INFO] Unable to find resource 'org.cytoscape:vizmap-api:pom:1.0-SNAPSHOT' in repository l2fprod-maven-repo (http://www.l2fprod.com/maven2/) Downloading: http://maven.springframework.org/osgi/org/cytoscape/vizmap-api/1.0-SNAPSHOT/vizmap-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:vizmap-api:jar:1.0-SNAPSHOT' in repository spring-osgified-artifacts (http://maven.springframework.org/osgi) Downloading: http://repository.ops4j.org/maven2//org/cytoscape/vizmap-api/1.0-SNAPSHOT/vizmap-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:vizmap-api:jar:1.0-SNAPSHOT' in repository ops4j.releases (http://repository.ops4j.org/maven2/) Downloading: http://www.l2fprod.com/maven2//org/cytoscape/vizmap-api/1.0-SNAPSHOT/vizmap-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:vizmap-api:jar:1.0-SNAPSHOT' in repository l2fprod-maven-repo (http://www.l2fprod.com/maven2/) Downloading: http://maven.springframework.org/osgi/org/cytoscape/vizmap-api/1.0-SNAPSHOT/vizmap-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:vizmap-api:jar:1.0-SNAPSHOT' in repository spring-osgified-artifacts (http://maven.springframework.org/osgi) Downloading: http://repository.ops4j.org/maven2//org/cytoscape/vizmap-api/1.0-SNAPSHOT/vizmap-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:vizmap-api:jar:1.0-SNAPSHOT' in repository ops4j.releases (http://repository.ops4j.org/maven2/) Downloading: http://www.l2fprod.com/maven2//org/cytoscape/vizmap-api/1.0-SNAPSHOT/vizmap-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:vizmap-api:jar:1.0-SNAPSHOT' in repository l2fprod-maven-repo (http://www.l2fprod.com/maven2/) [INFO] [pax:compile] [INFO] Compiling 16 source files to <http://cytoscape.wodaklab.org/hudson/job/Cy3%20IO%20api/ws/trunk/target/classes> [INFO] [recovering meta-data] [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20IO%20api/ws/trunk/pom.xml> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 IO api/modules/org.cytoscape$io-api/builds/2010-09-09_13-08-25/archive/org.cytoscape/io-api/1.0-SNAPSHOT/pom.xml [INFO] ------------------------------------------------------------------------ [ERROR] BUILD FAILURE [INFO] ------------------------------------------------------------------------ [INFO] Compilation failure <http://cytoscape.wodaklab.org/hudson/job/Cy3%20IO%20api/ws/trunk/src/main/java/org/cytoscape/io/read/CyTableReader.java>:[3,26] cannot find symbol symbol : class CyTable location: package org.cytoscape.model <http://cytoscape.wodaklab.org/hudson/job/Cy3%20IO%20api/ws/trunk/src/main/java/org/cytoscape/io/read/CyTableReader.java>:[8,8] cannot find symbol symbol : class CyTable location: interface org.cytoscape.io.read.CyTableReader [INFO] ------------------------------------------------------------------------ [INFO] For more information, run Maven with the -e switch [INFO] ------------------------------------------------------------------------ [INFO] Total time: 22 seconds [INFO] Finished at: Thu Sep 09 13:08:50 EDT 2010 [INFO] Final Memory: 44M/492M [INFO] ------------------------------------------------------------------------ Sending e-mails to: [email protected] channel stopped Archiving artifacts [trunk] $ /R1/tools/maven/apache-maven-2.1.0/bin/mvn org.codehaus.sonar:sonar-maven-plugin:1.8:sonar -Dsonar.jdbc.driver=com.mysql.jdbc.Driver -Dsonar.jdbc.username=sonar -Dsonar.jdbc.password=deploysonar -Dsonar.jdbc.url=jdbc:mysql://localhost:3306/sonar -Dsonar.host.url=http://localhost:8021/sonar/ -Dsonar.skipInstall=true [INFO] Scanning for projects... WAGON_VERSION: 1.0-beta-2 [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.io-api [org.cytoscape.io] [INFO] task-segment: [org.codehaus.sonar:sonar-maven-plugin:1.8:sonar] (aggregator-style) [INFO] ------------------------------------------------------------------------ [INFO] [sonar:sonar] [INFO] Sonar host: http://localhost:8021/sonar [INFO] Sonar version: 2.2 Downloading: http://maven.springframework.org/osgi/org/cytoscape/vizmap-api/1.0-SNAPSHOT/vizmap-api-1.0-SNAPSHOT.pom [INFO] Unable to find resource 'org.cytoscape:vizmap-api:pom:1.0-SNAPSHOT' in repository spring-osgified-artifacts (http://maven.springframework.org/osgi) Downloading: http://repository.ops4j.org/maven2//org/cytoscape/vizmap-api/1.0-SNAPSHOT/vizmap-api-1.0-SNAPSHOT.pom [INFO] Unable to find resource 'org.cytoscape:vizmap-api:pom:1.0-SNAPSHOT' in repository ops4j.releases (http://repository.ops4j.org/maven2/) Downloading: http://www.l2fprod.com/maven2//org/cytoscape/vizmap-api/1.0-SNAPSHOT/vizmap-api-1.0-SNAPSHOT.pom [INFO] Unable to find resource 'org.cytoscape:vizmap-api:pom:1.0-SNAPSHOT' in repository l2fprod-maven-repo (http://www.l2fprod.com/maven2/) Downloading: http://maven.springframework.org/osgi/org/cytoscape/vizmap-api/1.0-SNAPSHOT/vizmap-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:vizmap-api:jar:1.0-SNAPSHOT' in repository spring-osgified-artifacts (http://maven.springframework.org/osgi) Downloading: http://repository.ops4j.org/maven2//org/cytoscape/vizmap-api/1.0-SNAPSHOT/vizmap-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:vizmap-api:jar:1.0-SNAPSHOT' in repository ops4j.releases (http://repository.ops4j.org/maven2/) Downloading: http://www.l2fprod.com/maven2//org/cytoscape/vizmap-api/1.0-SNAPSHOT/vizmap-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:vizmap-api:jar:1.0-SNAPSHOT' in repository l2fprod-maven-repo (http://www.l2fprod.com/maven2/) Downloading: http://maven.springframework.org/osgi/org/cytoscape/vizmap-api/1.0-SNAPSHOT/vizmap-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:vizmap-api:jar:1.0-SNAPSHOT' in repository spring-osgified-artifacts (http://maven.springframework.org/osgi) Downloading: http://repository.ops4j.org/maven2//org/cytoscape/vizmap-api/1.0-SNAPSHOT/vizmap-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:vizmap-api:jar:1.0-SNAPSHOT' in repository ops4j.releases (http://repository.ops4j.org/maven2/) Downloading: http://www.l2fprod.com/maven2//org/cytoscape/vizmap-api/1.0-SNAPSHOT/vizmap-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:vizmap-api:jar:1.0-SNAPSHOT' in repository l2fprod-maven-repo (http://www.l2fprod.com/maven2/) [INFO] [sonar-core:internal] [INFO] Database dialect class org.sonar.api.database.dialect.MySql [INFO] ------------- Analyzing org.cytoscape.io-api [org.cytoscape.io] [INFO] Selected quality profile : Cytoscape, language=java [INFO] Configure maven plugins... [INFO] Sensor JavaSourceImporter... [INFO] Sensor JavaSourceImporter done: 360 ms [INFO] Sensor AsynchronousMeasuresSensor... [INFO] Sensor AsynchronousMeasuresSensor done: 27 ms [INFO] Sensor SquidSensor... [INFO] Java AST scan... [INFO] Java AST scan done: 228 ms [INFO] Squid extraction... [INFO] Squid extraction done: 184 ms [INFO] Sensor SquidSensor done: 445 ms [INFO] Sensor ProfileSensor... [INFO] Sensor ProfileSensor done: 25 ms [INFO] Sensor ProjectLinksSensor... [INFO] Sensor ProjectLinksSensor done: 5 ms [INFO] Sensor VersionEventsSensor... [INFO] Sensor VersionEventsSensor done: 37 ms [INFO] Sensor Maven dependencies... [INFO] Sensor Maven dependencies done: 83 ms [INFO] Execute maven plugin findbugs-maven-plugin... [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.io-api [org.cytoscape.io] [INFO] task-segment: [org.codehaus.mojo:findbugs-maven-plugin:2.3.1:findbugs] [INFO] ------------------------------------------------------------------------ [INFO] Preparing findbugs:findbugs [INFO] [resources:resources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 0 resource [INFO] Copying 0 resource Downloading: http://maven.springframework.org/osgi/org/cytoscape/vizmap-api/1.0-SNAPSHOT/vizmap-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:vizmap-api:jar:1.0-SNAPSHOT' in repository spring-osgified-artifacts (http://maven.springframework.org/osgi) Downloading: http://repository.ops4j.org/maven2//org/cytoscape/vizmap-api/1.0-SNAPSHOT/vizmap-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:vizmap-api:jar:1.0-SNAPSHOT' in repository ops4j.releases (http://repository.ops4j.org/maven2/) Downloading: http://www.l2fprod.com/maven2//org/cytoscape/vizmap-api/1.0-SNAPSHOT/vizmap-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:vizmap-api:jar:1.0-SNAPSHOT' in repository l2fprod-maven-repo (http://www.l2fprod.com/maven2/) Downloading: http://maven.springframework.org/osgi/org/cytoscape/vizmap-api/1.0-SNAPSHOT/vizmap-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:vizmap-api:jar:1.0-SNAPSHOT' in repository spring-osgified-artifacts (http://maven.springframework.org/osgi) Downloading: http://repository.ops4j.org/maven2//org/cytoscape/vizmap-api/1.0-SNAPSHOT/vizmap-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:vizmap-api:jar:1.0-SNAPSHOT' in repository ops4j.releases (http://repository.ops4j.org/maven2/) Downloading: http://www.l2fprod.com/maven2//org/cytoscape/vizmap-api/1.0-SNAPSHOT/vizmap-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:vizmap-api:jar:1.0-SNAPSHOT' in repository l2fprod-maven-repo (http://www.l2fprod.com/maven2/) [INFO] [pax:compile] [INFO] Compiling 16 source files to <http://cytoscape.wodaklab.org/hudson/job/Cy3%20IO%20api/ws/trunk/target/classes> [INFO] [recovering meta-data] [INFO] ------------------------------------------------------------------------ [ERROR] BUILD ERROR [INFO] ------------------------------------------------------------------------ [INFO] Can not execute Sonar Embedded error: Unable to execute maven plugin Compilation failure [INFO] ------------------------------------------------------------------------ [INFO] For more information, run Maven with the -e switch [INFO] ------------------------------------------------------------------------ [INFO] Total time: 27 seconds [INFO] Finished at: Thu Sep 09 13:09:23 EDT 2010 [INFO] Final Memory: 67M/724M [INFO] ------------------------------------------------------------------------ -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. 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