See <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/1505/changes>
Changes: [mes] added support for new CySession api ------------------------------------------ [...truncated 57 lines...] A src/main/java/org/cytoscape/task/internal/proxysettings A src/main/java/org/cytoscape/task/internal/proxysettings/ProxySettingsTask.java A src/main/java/org/cytoscape/task/internal/proxysettings/ProxySettingsTaskFactory.java A src/main/java/org/cytoscape/task/internal/tests A src/main/java/org/cytoscape/task/internal/tests/tunables A src/main/java/org/cytoscape/task/internal/tests/tunables/TunablesTestTask.java A src/main/java/org/cytoscape/task/internal/tests/tunables/TunablesTestTask2.java A src/main/java/org/cytoscape/task/internal/tests/tunables/TunablesTestTaskFactory.java A src/main/java/org/cytoscape/task/internal/tests/tunables/TunablesTestTaskFactory2.java A src/main/java/org/cytoscape/task/internal/destruction A src/main/java/org/cytoscape/task/internal/destruction/DestroyNetworkViewTask.java A src/main/java/org/cytoscape/task/internal/destruction/DestroyNetworkTask.java A src/main/java/org/cytoscape/task/internal/destruction/DestroyNetworkViewTaskFactory.java A src/main/java/org/cytoscape/task/internal/destruction/DestroyNetworkTaskFactory.java A src/main/java/org/cytoscape/task/internal/session A src/main/java/org/cytoscape/task/internal/session/NewSessionTask.java A src/main/java/org/cytoscape/task/internal/session/OpenSessionTaskFactory.java A src/main/java/org/cytoscape/task/internal/session/SaveSessionAsTaskFactory.java A src/main/java/org/cytoscape/task/internal/session/SaveSessionTask.java A src/main/java/org/cytoscape/task/internal/session/NewSessionTaskFactory.java A src/main/java/org/cytoscape/task/internal/session/OpenSessionTask.java A src/main/java/org/cytoscape/task/internal/session/SaveSessionAsTask.java A src/main/java/org/cytoscape/task/internal/session/SaveSessionTaskFactory.java A src/main/java/org/cytoscape/task/internal/creation A src/main/java/org/cytoscape/task/internal/creation/NewNetworkSelectedNodesEdgesTask.java A src/main/java/org/cytoscape/task/internal/creation/NewNetworkSelectedNodesOnlyTaskFactory.java A src/main/java/org/cytoscape/task/internal/creation/CreateNetworkViewTaskFactory.java A src/main/java/org/cytoscape/task/internal/creation/CloneNetworkTaskFactory.java A src/main/java/org/cytoscape/task/internal/creation/NewEmptyNetworkTask.java A src/main/java/org/cytoscape/task/internal/creation/NewNetworkSelectedNodesEdgesTaskFactory.java A src/main/java/org/cytoscape/task/internal/creation/NewNetworkSelectedNodesOnlyTask.java A src/main/java/org/cytoscape/task/internal/creation/AbstractCreationTask.java A src/main/java/org/cytoscape/task/internal/creation/CreateNetworkViewTask.java A src/main/java/org/cytoscape/task/internal/creation/CloneNetworkTask.java A src/main/java/org/cytoscape/task/internal/creation/NewEmptyNetworkTaskFactory.java A src/main/java/org/cytoscape/task/internal/zoom A src/main/java/org/cytoscape/task/internal/zoom/ZoomOutTask.java A src/main/java/org/cytoscape/task/internal/zoom/FitContentTask.java A src/main/java/org/cytoscape/task/internal/zoom/FitSelectedTaskFactory.java A src/main/java/org/cytoscape/task/internal/zoom/ZoomInTaskFactory.java A src/main/java/org/cytoscape/task/internal/zoom/ZoomOutTaskFactory.java A src/main/java/org/cytoscape/task/internal/zoom/FitContentTaskFactory.java A src/main/java/org/cytoscape/task/internal/zoom/AbstractZoomTask.java A src/main/java/org/cytoscape/task/internal/zoom/FitSelectedTask.java A src/main/java/org/cytoscape/task/internal/zoom/ZoomInTask.java A src/main/java/org/cytoscape/task/internal/hide A src/main/java/org/cytoscape/task/internal/hide/UnHideAllEdgesTask.java A src/main/java/org/cytoscape/task/internal/hide/UnHideAllTaskFactory.java A src/main/java/org/cytoscape/task/internal/hide/UnHideAllNodesTask.java A src/main/java/org/cytoscape/task/internal/hide/HideSelectedEdgesTaskFactory.java A src/main/java/org/cytoscape/task/internal/hide/HideSelectedTask.java A src/main/java/org/cytoscape/task/internal/hide/HideSelectedNodesTaskFactory.java A src/main/java/org/cytoscape/task/internal/hide/UnHideAllEdgesTaskFactory.java A src/main/java/org/cytoscape/task/internal/hide/UnHideAllTask.java A src/main/java/org/cytoscape/task/internal/hide/UnHideAllNodesTaskFactory.java A src/main/java/org/cytoscape/task/internal/hide/HideUtils.java A src/main/java/org/cytoscape/task/internal/hide/HideSelectedEdgesTask.java A src/main/java/org/cytoscape/task/internal/hide/HideSelectedTaskFactory.java A src/main/java/org/cytoscape/task/internal/hide/HideSelectedNodesTask.java A src/main/java/org/cytoscape/task/internal/loadnetwork A src/main/java/org/cytoscape/task/internal/loadnetwork/LoadNetworkURLTask.java A src/main/java/org/cytoscape/task/internal/loadnetwork/AbstractLoadNetworkTask.java A src/main/java/org/cytoscape/task/internal/loadnetwork/LoadNetworkFileTaskFactoryImpl.java A src/main/java/org/cytoscape/task/internal/loadnetwork/LoadNetworkURLTaskFactoryImpl.java A src/main/java/org/cytoscape/task/internal/loadnetwork/LoadNetworkFileTask.java A src/main/java/org/cytoscape/task/internal/exportnetwork AU src/main/java/org/cytoscape/task/internal/exportnetwork/ExportNetworkTaskFactory.java A src/main/java/org/cytoscape/task/internal/setcurrent A src/main/java/org/cytoscape/task/internal/setcurrent/SetCurrentNetworkTaskFactoryImpl.java A src/main/java/org/cytoscape/task/internal/setcurrent/SetCurrentNetworkTask.java A src/main/resources A src/main/resources/META-INF A src/main/resources/META-INF/spring A src/main/resources/META-INF/spring/bundle-context-osgi.xml A src/main/resources/META-INF/spring/bundle-context.xml A pom.xml U . At revision 22019 WARNING: clock of the subversion server appears to be out of sync. This can result in inconsistent check out behavior. No emails were triggered. Parsing POMs [trunk] $ java -cp /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven-agent-1.369.jar:/R1/tools/maven/apache-maven-2.1.0/boot/classworlds-1.1.jar hudson.maven.agent.Main /R1/tools/maven/apache-maven-2.1.0 /R1/resources/webservers/tomcat_2/webapps/hudson/WEB-INF/lib/remoting-1.369.jar /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven-interceptor-1.369.jar 33866 /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven2.1-interceptor-1.2.jar <===[HUDSON REMOTING CAPACITY]===> channel started Executing Maven: -B -f <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/pom.xml> deploy [INFO] Scanning for projects... WAGON_VERSION: 1.0-beta-2 [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.core-task-impl [INFO] task-segment: [deploy] [INFO] ------------------------------------------------------------------------ [INFO] [resources:resources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 2 resources [INFO] Copying 0 resource [INFO] snapshot org.cytoscape:session-api:1.0-SNAPSHOT: checking for updates from cytoscape_snapshots [INFO] snapshot org.cytoscape:viewmodel-api:1.0-SNAPSHOT: checking for updates from cytoscape_snapshots [INFO] snapshot org.cytoscape:presentation-api:1.0-SNAPSHOT: checking for updates from cytoscape_snapshots [INFO] snapshot org.cytoscape:io-api:1.0-SNAPSHOT: checking for updates from cytoscape_snapshots [INFO] snapshot org.cytoscape:vizmap-api:1.0-SNAPSHOT: checking for updates from cytoscape_snapshots [INFO] snapshot org.cytoscape:work-api:1.0-SNAPSHOT: checking for updates from cytoscape_snapshots [INFO] snapshot org.cytoscape:property:1.0-SNAPSHOT: checking for updates from cytoscape_snapshots [INFO] snapshot org.cytoscape:core-task-api:1.0-SNAPSHOT: checking for updates from cytoscape_snapshots [INFO] [pax:compile] [INFO] Compiling 92 source files to <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/target/classes> [INFO] [recovering meta-data] [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/pom.xml> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Core Task Implementation/modules/org.cytoscape$core-task-impl/builds/2010-09-22_19-04-06/archive/org.cytoscape/core-task-impl/1.0-SNAPSHOT/pom.xml [INFO] ------------------------------------------------------------------------ [ERROR] BUILD FAILURE [INFO] ------------------------------------------------------------------------ [INFO] Compilation failure <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/session/OpenSessionTaskFactory.java>:[35,28] cannot find symbol symbol : class CySessionReaderManager location: package org.cytoscape.io.read <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/session/OpenSessionTaskFactory.java>:[44,9] cannot find symbol symbol : class CySessionReaderManager location: class org.cytoscape.task.internal.session.OpenSessionTaskFactory <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/session/OpenSessionTaskFactory.java>:[46,53] cannot find symbol symbol : class CySessionReaderManager location: class org.cytoscape.task.internal.session.OpenSessionTaskFactory <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/session/SaveSessionTask.java>:[35,28] cannot find symbol symbol : class CySession location: package org.cytoscape.session <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/session/OpenSessionTask.java>:[36,28] cannot find symbol symbol : class CySession location: package org.cytoscape.session <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/session/OpenSessionTask.java>:[39,28] cannot find symbol symbol : class CySessionReader location: package org.cytoscape.io.read <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/session/OpenSessionTask.java>:[40,28] cannot find symbol symbol : class CySessionReaderManager location: package org.cytoscape.io.read <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/session/OpenSessionTask.java>:[53,9] cannot find symbol symbol : class CySessionReaderManager location: class org.cytoscape.task.internal.session.OpenSessionTask <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/session/OpenSessionTask.java>:[62,46] cannot find symbol symbol : class CySessionReaderManager location: class org.cytoscape.task.internal.session.OpenSessionTask <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/session/OpenSessionTask.java>:[91,2] cannot find symbol symbol : class CySessionReader location: class org.cytoscape.task.internal.session.OpenSessionTask.LoadSessionTask <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/session/OpenSessionTask.java>:[92,18] cannot find symbol symbol : class CySessionReader location: class org.cytoscape.task.internal.session.OpenSessionTask.LoadSessionTask <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/session/NewSessionTask.java>:[47,5] cannot find symbol symbol : method setCurrentSession(<nulltype>) location: interface org.cytoscape.session.CySessionManager <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/session/SaveSessionAsTask.java>:[60,70] cannot find symbol symbol : method getCurrentSession() location: interface org.cytoscape.session.CySessionManager <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/session/SaveSessionTask.java>:[58,2] cannot find symbol symbol : class CySession location: class org.cytoscape.task.internal.session.SaveSessionTask <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/session/SaveSessionTask.java>:[58,32] cannot find symbol symbol : method getCurrentSession() location: interface org.cytoscape.session.CySessionManager <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/session/OpenSessionTask.java>:[78,2] cannot find symbol symbol : class CySessionReader location: class org.cytoscape.task.internal.session.OpenSessionTask <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/src/main/java/org/cytoscape/task/internal/session/OpenSessionTask.java>:[97,3] cannot find symbol symbol : class CySession location: class org.cytoscape.task.internal.session.OpenSessionTask.LoadSessionTask [INFO] ------------------------------------------------------------------------ [INFO] For more information, run Maven with the -e switch [INFO] ------------------------------------------------------------------------ [INFO] Total time: 7 seconds [INFO] Finished at: Wed Sep 22 19:04:15 EDT 2010 [INFO] Final Memory: 46M/493M [INFO] ------------------------------------------------------------------------ Sending e-mails to: [email protected] channel stopped [trunk] $ /R1/tools/maven/apache-maven-2.1.0/bin/mvn org.codehaus.sonar:sonar-maven-plugin:1.8:sonar -Dsonar.jdbc.driver=com.mysql.jdbc.Driver -Dsonar.jdbc.username=sonar -Dsonar.jdbc.password=deploysonar -Dsonar.jdbc.url=jdbc:mysql://localhost:3306/sonar -Dsonar.host.url=http://localhost:8021/sonar/ -Dsonar.skipInstall=true [INFO] Scanning for projects... WAGON_VERSION: 1.0-beta-2 [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.core-task-impl [INFO] task-segment: [org.codehaus.sonar:sonar-maven-plugin:1.8:sonar] (aggregator-style) [INFO] ------------------------------------------------------------------------ [INFO] [sonar:sonar] [INFO] Sonar host: http://localhost:8021/sonar [INFO] Sonar version: 2.2 [INFO] [sonar-core:internal] [INFO] Database dialect class org.sonar.api.database.dialect.MySql [INFO] ------------- Analyzing org.cytoscape.core-task-impl [INFO] Selected quality profile : Cytoscape, language=java [INFO] Configure maven plugins... [INFO] Sensor JavaSourceImporter... [INFO] Sensor JavaSourceImporter done: 1853 ms [INFO] Sensor AsynchronousMeasuresSensor... [INFO] Sensor AsynchronousMeasuresSensor done: 32 ms [INFO] Sensor SquidSensor... [INFO] Java AST scan... [INFO] Java AST scan done: 584 ms [INFO] Squid extraction... [INFO] Squid extraction done: 801 ms [INFO] Sensor SquidSensor done: 1446 ms [INFO] Sensor ProfileSensor... [INFO] Sensor ProfileSensor done: 16 ms [INFO] Sensor ProjectLinksSensor... [INFO] Sensor ProjectLinksSensor done: 4 ms [INFO] Sensor VersionEventsSensor... [INFO] Sensor VersionEventsSensor done: 29 ms [INFO] Sensor Maven dependencies... [INFO] Sensor Maven dependencies done: 99 ms [INFO] Execute maven plugin findbugs-maven-plugin... [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.core-task-impl [INFO] task-segment: [org.codehaus.mojo:findbugs-maven-plugin:2.3.1:findbugs] [INFO] ------------------------------------------------------------------------ [INFO] Preparing findbugs:findbugs [INFO] [resources:resources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 2 resources [INFO] Copying 0 resource [INFO] [pax:compile] [INFO] Compiling 92 source files to <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Core%20Task%20Implementation/ws/trunk/target/classes> [INFO] [recovering meta-data] [INFO] ------------------------------------------------------------------------ [ERROR] BUILD ERROR [INFO] ------------------------------------------------------------------------ [INFO] Can not execute Sonar Embedded error: Unable to execute maven plugin Compilation failure [INFO] ------------------------------------------------------------------------ [INFO] For more information, run Maven with the -e switch [INFO] ------------------------------------------------------------------------ [INFO] Total time: 13 seconds [INFO] Finished at: Wed Sep 22 19:04:40 EDT 2010 [INFO] Final Memory: 68M/724M [INFO] ------------------------------------------------------------------------ -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. 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