See <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Work%20Swing%20Implementation/1135/changes>
Changes: [ruschein] Stage 1 in the removal of the Tunables Params enum. ------------------------------------------ [...truncated 124 lines...] [INFO] ------------------------------------------------------------------------ [INFO] Total time: 28 seconds [INFO] Finished at: Wed Oct 13 17:01:21 EDT 2010 [INFO] Final Memory: 50M/493M [INFO] ------------------------------------------------------------------------ Waiting for Hudson to finish collecting data Sending e-mails to: [email protected] channel stopped [trunk] $ /R1/tools/maven/apache-maven-2.1.0/bin/mvn org.codehaus.sonar:sonar-maven-plugin:1.8:sonar -Dsonar.jdbc.driver=com.mysql.jdbc.Driver -Dsonar.jdbc.username=sonar -Dsonar.jdbc.password=deploysonar -Dsonar.jdbc.url=jdbc:mysql://localhost:3306/sonar -Dsonar.host.url=http://localhost:8021/sonar/ -Dsonar.skipInstall=true [INFO] Scanning for projects... WAGON_VERSION: 1.0-beta-2 [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.work-swing-impl [INFO] task-segment: [org.codehaus.sonar:sonar-maven-plugin:1.8:sonar] (aggregator-style) [INFO] ------------------------------------------------------------------------ [INFO] [sonar:sonar] [INFO] Sonar host: http://localhost:8021/sonar [INFO] Sonar version: 2.2 [INFO] [sonar-core:internal] [INFO] Database dialect class org.sonar.api.database.dialect.MySql [INFO] ------------- Analyzing org.cytoscape.work-swing-impl [INFO] Selected quality profile : Cytoscape, language=java [INFO] Configure maven plugins... [INFO] Sensor JavaSourceImporter... [INFO] Sensor JavaSourceImporter done: 992 ms [INFO] Sensor AsynchronousMeasuresSensor... [INFO] Sensor AsynchronousMeasuresSensor done: 29 ms [INFO] Sensor SquidSensor... [INFO] Java AST scan... [INFO] Java AST scan done: 786 ms [INFO] Java bytecode scan... [WARN] Class 'org/cytoscape/work/internal/task/SwingTaskMonitor' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/utils/CollapsablePanel' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/FileHandler$MouseClick' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/FloatHandler' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/IntegerHandler' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/utils/XorPanel' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/ErrorPanel' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/TaskDialog$6' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/TaskDialog$7' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/TaskDialog$8' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/TaskDialog$9' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/utils/SupportedFileTypesManager$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/TaskDialog$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/FileHandler$myFileActionListener' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/TaskDialog$3' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/SwingTaskManager$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/SwingTaskManager$2$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/TaskDialog$2' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/SwingTaskManager$2' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/FileHandler' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/TaskDialog$5' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/TaskDialog' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/utils/stringLib' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/TaskDialog$4' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/utils/mySlider$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/utils/mySlider$2' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/BooleanHandler' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/SwingTaskMonitor$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/LongHandler' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/UndoSupportImpl' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/utils/mySlider' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/utils/myBoundedSwing$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/BoundedHandler' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/utils/XorPanel$GUITunableHandlerSwitchListener' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/DoubleHandler' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/ErrorPanel$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/GUITunableHandlerFactory' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/GUITunableInterceptorImpl' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/ListSingleHandler' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/utils/myBoundedSwing' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/SwingTaskManager' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/utils/CheckListCellRenderer' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/utils/CheckListManager' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/utils/SupportedFileTypesManager' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/StringUtils' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/SwingTaskMonitor' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/utils/CollapsablePanel' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/FileHandler$MouseClick' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/FloatHandler' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/IntegerHandler' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/utils/XorPanel' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/ErrorPanel' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/TaskDialog$6' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/TaskDialog$7' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/TaskDialog$8' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/TaskDialog$9' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/utils/SupportedFileTypesManager$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/TaskDialog$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/FileHandler$myFileActionListener' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/TaskDialog$3' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/SwingTaskManager$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/SwingTaskManager$2$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/TaskDialog$2' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/SwingTaskManager$2' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/FileHandler' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/TaskDialog$5' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/TaskDialog' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/utils/stringLib' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/TaskDialog$4' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/utils/mySlider$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/utils/mySlider$2' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/BooleanHandler' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/SwingTaskMonitor$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/LongHandler' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/UndoSupportImpl' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/utils/mySlider' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/utils/myBoundedSwing$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/BoundedHandler' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/utils/XorPanel$GUITunableHandlerSwitchListener' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/DoubleHandler' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/ErrorPanel$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/GUITunableHandlerFactory' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/GUITunableInterceptorImpl' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/ListSingleHandler' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/utils/myBoundedSwing' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/SwingTaskManager' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/utils/CheckListCellRenderer' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/utils/CheckListManager' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/tunables/utils/SupportedFileTypesManager' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/work/internal/task/StringUtils' is not accessible through the ClassLoader. [INFO] Java bytecode scan done: 157 ms [INFO] Squid extraction... [INFO] Package design analysis... [INFO] Package design analysis done: 13 ms [INFO] Squid extraction done: 562 ms [INFO] Sensor SquidSensor done: 1589 ms [INFO] Sensor ProfileSensor... [INFO] Sensor ProfileSensor done: 24 ms [INFO] Sensor ProjectLinksSensor... [INFO] Sensor ProjectLinksSensor done: 4 ms [INFO] Sensor VersionEventsSensor... [INFO] Sensor VersionEventsSensor done: 45 ms [INFO] Sensor Maven dependencies... [INFO] Sensor Maven dependencies done: 258 ms [INFO] Execute maven plugin findbugs-maven-plugin... [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.work-swing-impl [INFO] task-segment: [org.codehaus.mojo:findbugs-maven-plugin:2.3.1:findbugs] [INFO] ------------------------------------------------------------------------ [INFO] Preparing findbugs:findbugs [INFO] [resources:resources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 3 resources [INFO] Copying 1 resource [INFO] Copying 0 resource [INFO] [pax:compile] [INFO] Compiling 23 source files to <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Work%20Swing%20Implementation/ws/trunk/target/classes> [INFO] [findbugs:findbugs] [INFO] Locale is en [java] The following classes needed for analysis were missing: [java] org.springframework.core.InfrastructureProxy [java] Warnings generated: 59 [java] Missing classes: 1 [INFO] Execute maven plugin findbugs-maven-plugin done: 21875 ms [INFO] Sensor FindbugsSensor... [INFO] Sensor FindbugsSensor done: 224 ms [INFO] Sensor CheckstyleSensor... [INFO] Execute Checkstyle 5.1... [INFO] Checkstyle output report: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Work%20Swing%20Implementation/ws/trunk/target/sonar/checkstyle-result.xml> [INFO] Checkstyle configuration: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Work%20Swing%20Implementation/ws/trunk/target/sonar/checkstyle.xml> [INFO] Execute Checkstyle 5.1 done: 985 ms [INFO] Sensor CheckstyleSensor done: 1494 ms [INFO] Sensor PmdSensor... [INFO] Execute PMD 4.2.5... [INFO] Java version: 1.6 [INFO] PMD configuration: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Work%20Swing%20Implementation/ws/trunk/target/sonar/pmd.xml> [INFO] PMD output report: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Work%20Swing%20Implementation/ws/trunk/target/sonar/pmd-result.xml> [INFO] Execute PMD 4.2.5 done: 3490 ms [INFO] Sensor PmdSensor done: 3628 ms [INFO] Execute maven plugin cobertura-maven-plugin... [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.work-swing-impl [INFO] task-segment: [org.codehaus.mojo:cobertura-maven-plugin::cobertura] [INFO] ------------------------------------------------------------------------ [INFO] Preparing cobertura:cobertura [INFO] [resources:resources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 3 resources [INFO] Copying 1 resource [INFO] Copying 0 resource [INFO] [pax:compile] [INFO] Nothing to compile - all classes are up to date [INFO] [cobertura:instrument] [INFO] Cobertura 1.9.2 - GNU GPL License (NO WARRANTY) - See COPYRIGHT file Instrumenting 61 files to <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Work%20Swing%20Implementation/ws/trunk/target/generated-classes/cobertura> [cobertura] WARN [main] net.sourceforge.cobertura.instrument.ClassInstrumenter - No line number information found for class org.cytoscape.work.internal.tunables.InputStreamHandler$1. Perhaps you need to compile with debug=true? [cobertura] WARN [main] net.sourceforge.cobertura.instrument.ClassInstrumenter - No line number information found for class org.cytoscape.work.internal.tunables.URLHandler$1. Perhaps you need to compile with debug=true? [cobertura] WARN [main] net.sourceforge.cobertura.instrument.ClassInstrumenter - No line number information found for class org.cytoscape.work.internal.tunables.FileHandler$1. Perhaps you need to compile with debug=true? Cobertura: Saved information on 61 classes. Instrument time: 1731ms [INFO] Instrumentation was successful. [INFO] [build-helper:add-test-source {execution: add-test-source}] [INFO] Test Source directory: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Work%20Swing%20Implementation/ws/trunk/src/integration/java> added. [INFO] [resources:testResources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] skip non existing resourceDirectory <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Work%20Swing%20Implementation/ws/trunk/src/test/resources> [INFO] [pax:testCompile] [INFO] Compiling 1 source file to <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Work%20Swing%20Implementation/ws/trunk/target/test-classes> [INFO] [surefire:test] [INFO] Surefire report directory: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Work%20Swing%20Implementation/ws/trunk/target/surefire-reports> ------------------------------------------------------- T E S T S ------------------------------------------------------- There are no tests to run. Results : Tests run: 0, Failures: 0, Errors: 0, Skipped: 0 [INFO] [cobertura:cobertura] [INFO] Cobertura 1.9.2 - GNU GPL License (NO WARRANTY) - See COPYRIGHT file Cobertura: Loaded information on 61 classes. Report time: 981ms [INFO] Cobertura Report generation was successful. [INFO] Execute maven plugin cobertura-maven-plugin done: 5437 ms [INFO] Sensor CoberturaSensor... [INFO] parsing <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Work%20Swing%20Implementation/ws/trunk/target/site/cobertura/coverage.xml> [INFO] Sensor CoberturaSensor done: 358 ms [INFO] Sensor CpdSensor... [INFO] Sensor CpdSensor done: 224 ms [INFO] Execute maven plugin taglist-maven-plugin... [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.work-swing-impl [INFO] task-segment: [org.codehaus.mojo:taglist-maven-plugin:2.4:taglist] [INFO] ------------------------------------------------------------------------ [WARNING] DEPRECATED [tags]: No reason given [INFO] [taglist:taglist] [WARNING] Using legacy tag format. This is not recommended. [INFO] Execute maven plugin taglist-maven-plugin done: 2150 ms [INFO] Sensor org.sonar.plugins.taglist.taglistsen...@276c2195... [INFO] Sensor org.sonar.plugins.taglist.taglistsen...@276c2195 done: 25 ms [INFO] Sensor SurefireSensor... [INFO] parsing <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Work%20Swing%20Implementation/ws/trunk/target/surefire-reports> [INFO] Sensor SurefireSensor done: 17 ms [INFO] Execute decorators... [INFO] ANALYSIS SUCCESSFUL, you can browse http://localhost:8021/sonar/ [INFO] Database optimization... [INFO] Database optimization done: 1727 ms [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESSFUL [INFO] ------------------------------------------------------------------------ [INFO] Total time: 50 seconds [INFO] Finished at: Wed Oct 13 17:02:25 EDT 2010 [INFO] Final Memory: 99M/774M [INFO] ------------------------------------------------------------------------ -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To post to this group, send email to [email protected]. 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