See <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Default%20Mapping%20Calculators/1314/changes>
Changes: [kono] Refactored version of view/presentation/vizmap are merged. ------------------------------------------ Started by an SCM change Checking out http://chianti.ucsd.edu/svn/core3/default-mappingcalculators/trunk A osgi.bnd A src A src/test A src/test/java A src/test/java/org A src/test/java/org/cytoscape A src/test/java/org/cytoscape/vizmap A src/test/java/org/cytoscape/vizmap/ColorVisualProperty.java A src/test/java/org/cytoscape/vizmap/DiscreteMappingTest.java A src/main A src/main/java A src/main/java/org A src/main/java/org/cytoscape A src/main/java/org/cytoscape/view A src/main/java/org/cytoscape/view/vizmap A src/main/java/org/cytoscape/view/vizmap/mappings A src/main/java/org/cytoscape/view/vizmap/mappings/BoundaryRangeValues.java A src/main/java/org/cytoscape/view/vizmap/mappings/ContinuousMapping.java AU src/main/java/org/cytoscape/view/vizmap/mappings/PassthroughMapping.java A src/main/java/org/cytoscape/view/vizmap/mappings/interpolators A src/main/java/org/cytoscape/view/vizmap/mappings/interpolators/Interpolator.java A src/main/java/org/cytoscape/view/vizmap/mappings/interpolators/LinearNumberToNumberInterpolator.java A src/main/java/org/cytoscape/view/vizmap/mappings/interpolators/LinearNumberInterpolator.java A src/main/java/org/cytoscape/view/vizmap/mappings/interpolators/LinearNumberToColorInterpolator.java A src/main/java/org/cytoscape/view/vizmap/mappings/interpolators/FlatInterpolator.java A src/main/java/org/cytoscape/view/vizmap/mappings/interpolators/NumberInterpolator.java A src/main/java/org/cytoscape/view/vizmap/mappings/AbstractVisualMappingFunction.java A src/main/java/org/cytoscape/view/vizmap/mappings/ContinuousMappingPoint.java A src/main/java/org/cytoscape/view/vizmap/mappings/DiscreteMapping.java A src/main/resources A src/main/resources/META-INF A src/main/resources/META-INF/spring A src/main/resources/META-INF/spring/bundle-context-osgi.xml A src/main/resources/META-INF/spring/bundle-context.xml A pom.xml U . At revision 22243 No emails were triggered. Parsing POMs [trunk] $ java -cp /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven-agent-1.369.jar:/R1/tools/maven/apache-maven-2.1.0/boot/classworlds-1.1.jar hudson.maven.agent.Main /R1/tools/maven/apache-maven-2.1.0 /R1/resources/webservers/tomcat_2/webapps/hudson/WEB-INF/lib/remoting-1.369.jar /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven-interceptor-1.369.jar 49174 /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven2.1-interceptor-1.2.jar <===[HUDSON REMOTING CAPACITY]===> channel started Executing Maven: -B -f <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Default%20Mapping%20Calculators/ws/trunk/pom.xml> deploy [INFO] Scanning for projects... WAGON_VERSION: 1.0-beta-2 [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.view.vizmap.mappings [INFO] task-segment: [deploy] [INFO] ------------------------------------------------------------------------ [INFO] [resources:resources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 2 resources [INFO] [pax:compile] [INFO] Compiling 12 source files to <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Default%20Mapping%20Calculators/ws/trunk/target/classes> [INFO] [recovering meta-data] [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Default%20Mapping%20Calculators/ws/trunk/pom.xml> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Default Mapping Calculators/modules/org.cytoscape$default-mappings/builds/2010-10-14_18-06-01/archive/org.cytoscape/default-mappings/1.0-SNAPSHOT/pom.xml [INFO] ------------------------------------------------------------------------ [ERROR] BUILD FAILURE [INFO] ------------------------------------------------------------------------ [INFO] Compilation failure <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Default%20Mapping%20Calculators/ws/trunk/src/main/java/org/cytoscape/view/vizmap/mappings/ContinuousMapping.java>:[71,7] org.cytoscape.view.vizmap.mappings.ContinuousMapping is not abstract and does not override abstract method <G>apply(java.util.Collection<? extends org.cytoscape.view.model.View<G>>) in org.cytoscape.view.vizmap.VisualMappingFunction <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Default%20Mapping%20Calculators/ws/trunk/src/main/java/org/cytoscape/view/vizmap/mappings/ContinuousMapping.java>:[165,1] method does not override or implement a method from a supertype <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Default%20Mapping%20Calculators/ws/trunk/src/main/java/org/cytoscape/view/vizmap/mappings/DiscreteMapping.java>:[59,7] org.cytoscape.view.vizmap.mappings.DiscreteMapping is not abstract and does not override abstract method <G>apply(java.util.Collection<? extends org.cytoscape.view.model.View<G>>) in org.cytoscape.view.vizmap.VisualMappingFunction <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Default%20Mapping%20Calculators/ws/trunk/src/main/java/org/cytoscape/view/vizmap/mappings/DiscreteMapping.java>:[81,1] method does not override or implement a method from a supertype <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Default%20Mapping%20Calculators/ws/trunk/src/main/java/org/cytoscape/view/vizmap/mappings/PassthroughMapping.java>:[45,7] org.cytoscape.view.vizmap.mappings.PassthroughMapping is not abstract and does not override abstract method <G>apply(java.util.Collection<? extends org.cytoscape.view.model.View<G>>) in org.cytoscape.view.vizmap.VisualMappingFunction <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Default%20Mapping%20Calculators/ws/trunk/src/main/java/org/cytoscape/view/vizmap/mappings/PassthroughMapping.java>:[69,1] method does not override or implement a method from a supertype [INFO] ------------------------------------------------------------------------ [INFO] For more information, run Maven with the -e switch [INFO] ------------------------------------------------------------------------ [INFO] Total time: 5 seconds [INFO] Finished at: Thu Oct 14 18:06:09 EDT 2010 [INFO] Final Memory: 45M/493M [INFO] ------------------------------------------------------------------------ Sending e-mails to: [email protected] channel stopped [trunk] $ /R1/tools/maven/apache-maven-2.1.0/bin/mvn org.codehaus.sonar:sonar-maven-plugin:1.8:sonar -Dsonar.jdbc.driver=com.mysql.jdbc.Driver -Dsonar.jdbc.username=sonar -Dsonar.jdbc.password=deploysonar -Dsonar.jdbc.url=jdbc:mysql://localhost:3306/sonar -Dsonar.host.url=http://localhost:8021/sonar/ -Dsonar.skipInstall=true [INFO] Scanning for projects... WAGON_VERSION: 1.0-beta-2 [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.view.vizmap.mappings [INFO] task-segment: [org.codehaus.sonar:sonar-maven-plugin:1.8:sonar] (aggregator-style) [INFO] ------------------------------------------------------------------------ [INFO] [sonar:sonar] [INFO] Sonar host: http://localhost:8021/sonar [INFO] Sonar version: 2.2 [INFO] [sonar-core:internal] [INFO] Database dialect class org.sonar.api.database.dialect.MySql [INFO] ------------- Analyzing org.cytoscape.view.vizmap.mappings [INFO] Selected quality profile : Cytoscape, language=java [INFO] Configure maven plugins... [INFO] Sensor JavaSourceImporter... [INFO] Sensor JavaSourceImporter done: 467 ms [INFO] Sensor AsynchronousMeasuresSensor... [INFO] Sensor AsynchronousMeasuresSensor done: 37 ms [INFO] Sensor SquidSensor... [INFO] Java AST scan... [INFO] Java AST scan done: 323 ms [INFO] Java bytecode scan... [WARN] Class 'org/cytoscape/view/vizmap/mappings/interpolators/LinearNumberToNumberInterpolator' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/view/vizmap/mappings/interpolators/LinearNumberInterpolator' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/view/vizmap/mappings/interpolators/LinearNumberToColorInterpolator' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/view/vizmap/mappings/AbstractVisualMappingFunction' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/view/vizmap/mappings/DiscreteMapping' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/view/vizmap/mappings/ContinuousMapping' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/view/vizmap/mappings/PassthroughMapping' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/view/vizmap/mappings/ContinuousMappingPoint' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/view/vizmap/mappings/interpolators/LinearNumberToNumberInterpolator' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/view/vizmap/mappings/interpolators/LinearNumberInterpolator' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/view/vizmap/mappings/interpolators/LinearNumberToColorInterpolator' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/view/vizmap/mappings/AbstractVisualMappingFunction' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/view/vizmap/mappings/DiscreteMapping' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/view/vizmap/mappings/ContinuousMapping' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/view/vizmap/mappings/PassthroughMapping' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/view/vizmap/mappings/ContinuousMappingPoint' is not accessible through the ClassLoader. [INFO] Java bytecode scan done: 45 ms [INFO] Squid extraction... [INFO] Package design analysis... [INFO] Package design analysis done: 7 ms [INFO] Squid extraction done: 190 ms [INFO] Sensor SquidSensor done: 609 ms [INFO] Sensor ProfileSensor... [INFO] Sensor ProfileSensor done: 25 ms [INFO] Sensor ProjectLinksSensor... [INFO] Sensor ProjectLinksSensor done: 3 ms [INFO] Sensor VersionEventsSensor... [INFO] Sensor VersionEventsSensor done: 38 ms [INFO] Sensor Maven dependencies... [INFO] Sensor Maven dependencies done: 75 ms [INFO] Execute maven plugin findbugs-maven-plugin... [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.view.vizmap.mappings [INFO] task-segment: [org.codehaus.mojo:findbugs-maven-plugin:2.3.1:findbugs] [INFO] ------------------------------------------------------------------------ [INFO] Preparing findbugs:findbugs [INFO] [resources:resources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 2 resources [INFO] [pax:compile] [INFO] Compiling 8 source files to <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Default%20Mapping%20Calculators/ws/trunk/target/classes> [INFO] [recovering meta-data] [INFO] ------------------------------------------------------------------------ [ERROR] BUILD ERROR [INFO] ------------------------------------------------------------------------ [INFO] Can not execute Sonar Embedded error: Unable to execute maven plugin Compilation failure [INFO] ------------------------------------------------------------------------ [INFO] For more information, run Maven with the -e switch [INFO] ------------------------------------------------------------------------ [INFO] Total time: 10 seconds [INFO] Finished at: Thu Oct 14 18:06:26 EDT 2010 [INFO] Final Memory: 67M/726M [INFO] ------------------------------------------------------------------------ -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/cytoscape-cvs?hl=en.
