See <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/54/>
------------------------------------------ <===[HUDSON REMOTING CAPACITY]===> channel started Executing Maven: -B -f <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/pom.xml> deploy [INFO] Scanning for projects... WAGON_VERSION: 1.0-beta-2 [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.psi-mi-impl [org.cytoscape.psi_mi] [INFO] task-segment: [deploy] [INFO] ------------------------------------------------------------------------ Downloading: http://maven.springframework.org/osgi/org/cytoscape/service-util/1.0-SNAPSHOT/service-util-1.0-SNAPSHOT.pom [INFO] Unable to find resource 'org.cytoscape:service-util:pom:1.0-SNAPSHOT' in repository spring-osgified-artifacts (http://maven.springframework.org/osgi) Downloading: http://repository.ops4j.org/maven2//org/cytoscape/service-util/1.0-SNAPSHOT/service-util-1.0-SNAPSHOT.pom [INFO] Unable to find resource 'org.cytoscape:service-util:pom:1.0-SNAPSHOT' in repository ops4j.releases (http://repository.ops4j.org/maven2/) Downloading: http://www.l2fprod.com/maven2//org/cytoscape/service-util/1.0-SNAPSHOT/service-util-1.0-SNAPSHOT.pom [INFO] Unable to find resource 'org.cytoscape:service-util:pom:1.0-SNAPSHOT' in repository l2fprod-maven-repo (http://www.l2fprod.com/maven2/) [INFO] [jaxb2:xjc {execution: mi1}] [INFO] Generating source... [INFO] parsing a schema... [INFO] compiling a schema... [INFO] org/cytoscape/psi_mi/internal/schema/mi1/AttributeListType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi1/AvailabilityType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi1/BaseLocationType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi1/BibrefType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi1/BioSourceType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi1/CvType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi1/DbReferenceType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi1/EntrySet.java [INFO] org/cytoscape/psi_mi/internal/schema/mi1/ExperimentType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi1/FeatureType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi1/FullNameType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi1/InteractionElementType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi1/IntervalType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi1/LabelType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi1/NamesType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi1/ObjectFactory.java [INFO] org/cytoscape/psi_mi/internal/schema/mi1/OpenCvType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi1/PositionType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi1/ProteinInteractorType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi1/ProteinParticipantType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi1/RefType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi1/XrefType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi1/package-info.java [INFO] [jaxb2:xjc {execution: mi25}] [INFO] Generating source... [INFO] parsing a schema... [INFO] compiling a schema... [INFO] org/cytoscape/psi_mi/internal/schema/mi25/AttributeListType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi25/AvailabilityType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi25/BaseLocationType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi25/BibrefType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi25/BioSourceType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi25/ConfidenceListType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi25/ConfidenceType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi25/CvType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi25/DbReferenceType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi25/EntrySet.java [INFO] org/cytoscape/psi_mi/internal/schema/mi25/ExperimentRefListType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi25/ExperimentType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi25/FeatureElementType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi25/FullNameType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi25/InteractionElementType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi25/InteractorElementType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi25/IntervalType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi25/LabelType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi25/NamesType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi25/ObjectFactory.java [INFO] org/cytoscape/psi_mi/internal/schema/mi25/OpenCvType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi25/ParameterType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi25/ParticipantType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi25/PositionType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi25/XrefType.java [INFO] org/cytoscape/psi_mi/internal/schema/mi25/package-info.java [INFO] [resources:resources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 3 resources [INFO] [pax:compile] [INFO] Compiling 76 source files to <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/classes> [INFO] [recovering meta-data] [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/pom.xml> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 PSI-MI impl/modules/org.cytoscape$psi-mi-impl/builds/2010-10-25_14-16-08/archive/org.cytoscape/psi-mi-impl/1.0-SNAPSHOT/pom.xml [INFO] ------------------------------------------------------------------------ [ERROR] BUILD FAILURE [INFO] ------------------------------------------------------------------------ [INFO] Compilation failure <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/src/main/java/org/cytoscape/psi_mi/internal/cyto_mapper/MapToCytoscape.java>:[568,19] cannot find symbol symbol : method contains(java.lang.String,java.lang.Class<java.lang.String>) location: interface org.cytoscape.model.CyRow <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/src/main/java/org/cytoscape/psi_mi/internal/cyto_mapper/MapToCytoscape.java>:[614,17] cannot find symbol symbol : method contains(java.lang.String,java.lang.Class<capture#876 of ? extends java.lang.Object>) location: interface org.cytoscape.model.CyRow <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/src/main/java/org/cytoscape/psi_mi/internal/plugin/PsiMiCyFileFilter.java>:[18,7] org.cytoscape.psi_mi.internal.plugin.PsiMiCyFileFilter is not abstract and does not override abstract method accepts(java.io.InputStream,org.cytoscape.io.DataCategory) in org.cytoscape.io.CyFileFilter <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/src/main/java/org/cytoscape/psi_mi/internal/plugin/PsiMiCyFileFilter.java>:[41,1] method does not override or implement a method from a supertype <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/src/main/java/org/cytoscape/psi_mi/internal/plugin/PsiMiCyFileFilter.java>:[71,1] method does not override or implement a method from a supertype [INFO] ------------------------------------------------------------------------ [INFO] For more information, run Maven with the -e switch [INFO] ------------------------------------------------------------------------ [INFO] Total time: 27 seconds [INFO] Finished at: Mon Oct 25 14:16:38 EDT 2010 [INFO] Final Memory: 54M/480M [INFO] ------------------------------------------------------------------------ -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. 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