See <http://cytoscape.wodaklab.org/hudson/job/Ding%20Presentation%20Implementation/1447/changes>
Changes: [mes] changed createColumn syntax for CyTable ------------------------------------------ [...truncated 93 lines...] A src/main/java/org/cytoscape/ding/ShowGraphicsDetailsAction.java.hold AU src/main/java/org/cytoscape/ding/LabelPositionCellRenderer.java A src/main/java/org/cytoscape/ding/PrintLOD.java A src/main/java/org/cytoscape/ding/GraphView.java A src/main/resources A src/main/resources/META-INF A src/main/resources/META-INF/spring A src/main/resources/META-INF/spring/bundle-context-osgi.xml A src/main/resources/META-INF/spring/bundle-context.xml A pom.xml U . At revision 22405 WARNING: clock of the subversion server appears to be out of sync. This can result in inconsistent check out behavior. Parsing POMs [trunk] $ java -cp /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven-agent-1.369.jar:/R1/tools/maven/apache-maven-2.1.0/boot/classworlds-1.1.jar hudson.maven.agent.Main /R1/tools/maven/apache-maven-2.1.0 /R1/resources/webservers/tomcat_2/webapps/hudson/WEB-INF/lib/remoting-1.369.jar /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven-interceptor-1.369.jar 38028 /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven2.1-interceptor-1.2.jar <===[HUDSON REMOTING CAPACITY]===> channel started Executing Maven: -B -f <http://cytoscape.wodaklab.org/hudson/job/Ding%20Presentation%20Implementation/ws/trunk/pom.xml> deploy [INFO] Scanning for projects... WAGON_VERSION: 1.0-beta-2 [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.ding-presentation-impl [INFO] task-segment: [deploy] [INFO] ------------------------------------------------------------------------ [INFO] [resources:resources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 2 resources [INFO] Copying 0 resource [INFO] [pax:compile] [INFO] Compiling 70 source files to <http://cytoscape.wodaklab.org/hudson/job/Ding%20Presentation%20Implementation/ws/trunk/target/classes> [INFO] [recovering meta-data] [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Ding%20Presentation%20Implementation/ws/trunk/pom.xml> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Ding Presentation Implementation/modules/org.cytoscape$ding-presentation-impl/builds/2010-10-25_19-06-45/archive/org.cytoscape/ding-presentation-impl/1.0-SNAPSHOT/pom.xml [INFO] ------------------------------------------------------------------------ [ERROR] BUILD FAILURE [INFO] ------------------------------------------------------------------------ [INFO] Compilation failure <http://cytoscape.wodaklab.org/hudson/job/Ding%20Presentation%20Implementation/ws/trunk/src/main/java/org/cytoscape/ding/impl/DGraphView.java>:[398,9] <T>createColumn(java.lang.String,java.lang.Class<? extends T>,boolean) in org.cytoscape.model.CyTable cannot be applied to (java.lang.String,java.lang.Class<java.lang.Boolean>) <http://cytoscape.wodaklab.org/hudson/job/Ding%20Presentation%20Implementation/ws/trunk/src/main/java/org/cytoscape/ding/impl/DGraphView.java>:[402,9] <T>createColumn(java.lang.String,java.lang.Class<? extends T>,boolean) in org.cytoscape.model.CyTable cannot be applied to (java.lang.String,java.lang.Class<java.lang.Boolean>) [INFO] ------------------------------------------------------------------------ [INFO] For more information, run Maven with the -e switch [INFO] ------------------------------------------------------------------------ [INFO] Total time: 7 seconds [INFO] Finished at: Mon Oct 25 19:06:54 EDT 2010 [INFO] Final Memory: 50M/600M [INFO] ------------------------------------------------------------------------ Sending e-mails to: [email protected] channel stopped [trunk] $ /R1/tools/maven/apache-maven-2.1.0/bin/mvn org.codehaus.sonar:sonar-maven-plugin:1.8:sonar -Dsonar.jdbc.driver=com.mysql.jdbc.Driver -Dsonar.jdbc.username=sonar -Dsonar.jdbc.password=deploysonar -Dsonar.jdbc.url=jdbc:mysql://localhost:3306/sonar -Dsonar.host.url=http://localhost:8021/sonar/ -Dsonar.skipInstall=true [INFO] Scanning for projects... WAGON_VERSION: 1.0-beta-2 [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.ding-presentation-impl [INFO] task-segment: [org.codehaus.sonar:sonar-maven-plugin:1.8:sonar] (aggregator-style) [INFO] ------------------------------------------------------------------------ [INFO] [sonar:sonar] [INFO] Sonar host: http://localhost:8021/sonar [INFO] Sonar version: 2.2 [INFO] [sonar-core:internal] [INFO] Database dialect class org.sonar.api.database.dialect.MySql [INFO] ------------- Analyzing org.cytoscape.ding-presentation-impl [INFO] Selected quality profile : Cytoscape, language=java [INFO] Configure maven plugins... [INFO] Sensor JavaSourceImporter... [INFO] Sensor JavaSourceImporter done: 699 ms [INFO] Sensor AsynchronousMeasuresSensor... [INFO] Sensor AsynchronousMeasuresSensor done: 41 ms [INFO] Sensor SquidSensor... [INFO] Java AST scan... [INFO] Java AST scan done: 3772 ms [INFO] Java bytecode scan... [WARN] Class 'org/cytoscape/ding/impl/AnchorTwoDVisualProperty' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/GraphViewNodesHiddenEvent' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/FontTwoDVisualProperty' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/DGraphView$ShapeType' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/StrokeTwoDVisualProperty' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/DGraphView' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/DVisualLexicon' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/DGraphView$ZOrder' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/GraphViewEdgesHiddenEvent' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/BirdsEyeView$InnerViewportChangeListener' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/icon/ArrowIcon' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/PopupMenuHelper' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/IntegerTwoDVisualProperty' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/BirdsEyeView' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/DingCanvas' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/AddDeleteHandler' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/LabelPositionChooser$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/DEdgeDetails$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/GraphViewEdgesSelectedEvent' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/LabelPositionChooser$2' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/DEdgeView' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/DNodeView' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/DEdgeDetails$2' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/GraphViewNodesUnselectedEvent' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/ArbitraryGraphicsCanvas' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/NodeShapeTwoDVisualProperty' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/ViewportChangeListenerChain' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/PopupMenuHelper$PopupAction' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/BirdsEyeView$InnerMouseListener' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/Justify' is not accessible through the ClassLoader. [WARN] Class '[Lorg/cytoscape/ding/ArrowShape;' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/icon/ArrowIcon' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/DNodeDetails' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/GraphViewNodesRestoredEvent' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/JustifyTwoDVisualProperty' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/ViewState' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/CyLabelPositionPropertyEditor' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/LabelPlacerControl' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/LineStyle' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/InnerCanvas' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/GraphViewEdgesUnselectedEvent' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/icon/NodeIcon' is not accessible through the ClassLoader. [WARN] Class '[Lorg/cytoscape/ding/impl/Anchor;' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/BirdsEyeView$InnerContentChangeListener' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/DingRenderingEngineFactory' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/GraphViewChangeEventAdapter' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/DNodeView$ReadOnlyIterator' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/InternalFrameComponent$ZOrder' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/CyLabelPositionPropertyEditor$2' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/GraphViewChangeListenerChain' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/CyLabelPositionPropertyEditor$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/ContentChangeListenerChain' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/LabelPositionCellRenderer' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/DGraphView$Canvas' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/ViewportChangeListener' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/GraphViewNodesSelectedEvent' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/GraphViewEdgesRestoredEvent' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/icon/DefaultIconFactory' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/DEdgeDetails' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/InternalFrameComponent' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/icon/LineTypeIcon' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/LabelPositionChooser' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/DingNavigationRenderingEngine' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/DingNavigationRenderingEngineFactory' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/ViewChangeEdit' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/FlagAndSelectionHandler' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/ViewChangeEdit$SavedObjs' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/NodeShape' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/BirdsEyeView$InnerMouseMotionListener' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/AnchorTwoDVisualProperty' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/GraphViewNodesHiddenEvent' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/FontTwoDVisualProperty' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/DGraphView$ShapeType' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/StrokeTwoDVisualProperty' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/DGraphView' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/DVisualLexicon' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/DGraphView$ZOrder' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/GraphViewEdgesHiddenEvent' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/BirdsEyeView$InnerViewportChangeListener' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/icon/ArrowIcon' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/PopupMenuHelper' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/IntegerTwoDVisualProperty' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/BirdsEyeView' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/DingCanvas' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/AddDeleteHandler' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/LabelPositionChooser$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/DEdgeDetails$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/GraphViewEdgesSelectedEvent' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/LabelPositionChooser$2' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/DEdgeView' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/DNodeView' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/DEdgeDetails$2' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/GraphViewNodesUnselectedEvent' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/ArbitraryGraphicsCanvas' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/NodeShapeTwoDVisualProperty' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/ViewportChangeListenerChain' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/PopupMenuHelper$PopupAction' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/BirdsEyeView$InnerMouseListener' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/Justify' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/DNodeDetails' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/GraphViewNodesRestoredEvent' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/JustifyTwoDVisualProperty' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/ViewState' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/CyLabelPositionPropertyEditor' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/LabelPlacerControl' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/LineStyle' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/InnerCanvas' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/GraphViewEdgesUnselectedEvent' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/icon/NodeIcon' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/BirdsEyeView$InnerContentChangeListener' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/DingRenderingEngineFactory' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/GraphViewChangeEventAdapter' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/DNodeView$ReadOnlyIterator' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/InternalFrameComponent$ZOrder' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/CyLabelPositionPropertyEditor$2' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/GraphViewChangeListenerChain' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/CyLabelPositionPropertyEditor$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/ContentChangeListenerChain' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/LabelPositionCellRenderer' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/DGraphView$Canvas' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/ViewportChangeListener' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/GraphViewNodesSelectedEvent' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/GraphViewEdgesRestoredEvent' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/icon/DefaultIconFactory' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/DEdgeDetails' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/InternalFrameComponent' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/icon/LineTypeIcon' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/LabelPositionChooser' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/DingNavigationRenderingEngine' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/DingNavigationRenderingEngineFactory' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/ViewChangeEdit' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/FlagAndSelectionHandler' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/ViewChangeEdit$SavedObjs' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/NodeShape' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/ding/impl/BirdsEyeView$InnerMouseMotionListener' is not accessible through the ClassLoader. [INFO] Java bytecode scan done: 611 ms [INFO] Squid extraction... [INFO] Package design analysis... [INFO] Package design analysis done: 13 ms [INFO] Squid extraction done: 850 ms [INFO] Sensor SquidSensor done: 5304 ms [INFO] Sensor ProfileSensor... [INFO] Sensor ProfileSensor done: 17 ms [INFO] Sensor ProjectLinksSensor... [INFO] Sensor ProjectLinksSensor done: 3 ms [INFO] Sensor VersionEventsSensor... [INFO] Sensor VersionEventsSensor done: 29 ms [INFO] Sensor Maven dependencies... [INFO] Sensor Maven dependencies done: 207 ms [INFO] Execute maven plugin findbugs-maven-plugin... [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.ding-presentation-impl [INFO] task-segment: [org.codehaus.mojo:findbugs-maven-plugin:2.3.1:findbugs] [INFO] ------------------------------------------------------------------------ [INFO] Preparing findbugs:findbugs [INFO] [resources:resources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 2 resources [INFO] Copying 0 resource [INFO] [pax:compile] [INFO] Compiling 49 source files to <http://cytoscape.wodaklab.org/hudson/job/Ding%20Presentation%20Implementation/ws/trunk/target/classes> [INFO] [recovering meta-data] [INFO] ------------------------------------------------------------------------ [ERROR] BUILD ERROR [INFO] ------------------------------------------------------------------------ [INFO] Can not execute Sonar Embedded error: Unable to execute maven plugin Compilation failure [INFO] ------------------------------------------------------------------------ [INFO] For more information, run Maven with the -e switch [INFO] ------------------------------------------------------------------------ [INFO] Total time: 17 seconds [INFO] Finished at: Mon Oct 25 19:07:23 EDT 2010 [INFO] Final Memory: 73M/723M [INFO] ------------------------------------------------------------------------ -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. 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