See <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/1169/changes>
Changes: [mes] renamed test [mes] removed use of the name cydatatable ------------------------------------------ [...truncated 140 lines...] Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/apidocs/org/cytoscape/model/internal//CyNetworkFactoryImpl.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/apidocs/org/cytoscape/model/internal//CyNetworkManagerImpl.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/apidocs/org/cytoscape/model/internal//CyRootNetworkFactoryImpl.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/apidocs/org/cytoscape/model/internal//CyTableFactoryImpl.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/apidocs/org/cytoscape/model/internal//CyTableImpl.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/apidocs/org/cytoscape/model/internal//CyTableManagerImpl.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/apidocs/org/cytoscape/model/internal//package-frame.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/apidocs/org/cytoscape/model/internal//package-summary.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/apidocs/org/cytoscape/model/internal//package-tree.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/apidocs/constant-values.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/apidocs/org/cytoscape/model/internal//class-use/CyNetworkManagerImpl.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/apidocs/org/cytoscape/model/internal//class-use/CyTableImpl.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/apidocs/org/cytoscape/model/internal//class-use/ArrayGraph.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/apidocs/org/cytoscape/model/internal//class-use/CyTableFactoryImpl.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/apidocs/org/cytoscape/model/internal//class-use/CyTableManagerImpl.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/apidocs/org/cytoscape/model/internal//class-use/CyNetworkFactoryImpl.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/apidocs/org/cytoscape/model/internal//class-use/CyRootNetworkFactoryImpl.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/apidocs/org/cytoscape/model/internal//package-use.html...> Building index for all the packages and classes... Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/apidocs/overview-tree.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/apidocs/index-all.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/apidocs/deprecated-list.html...> Building index for all classes... Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/apidocs/allclasses-frame.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/apidocs/allclasses-noframe.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/apidocs/index.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/apidocs/help-doc.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/apidocs/stylesheet.css...> 3 warnings [WARNING] Javadoc Warnings [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/src/main/java/org/cytoscape/model/internal/CyTableImpl.java>:89: warning - @param argument "typeMap" is not a parameter name. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/src/main/java/org/cytoscape/model/internal/CyTableImpl.java>:89: warning - @param argument "name" is not a parameter name. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/src/main/java/org/cytoscape/model/internal/CyTableImpl.java>:189: warning - @param argument "u" is not a parameter name. [INFO] Building jar: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/model-impl-3.0.0-alpha2-SNAPSHOT-javadoc.jar> [INFO] Preparing source:jar [WARNING] Removing: jar from forked lifecycle, to prevent recursive invocation. [INFO] No goals needed for project - skipping [INFO] [source:jar {execution: attach-sources}] [INFO] Building jar: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/model-impl-3.0.0-alpha2-SNAPSHOT-sources.jar> [INFO] [jar:test-jar {execution: default}] [INFO] Building jar: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/model-impl-3.0.0-alpha2-SNAPSHOT-tests.jar> [INFO] [failsafe:integration-test {execution: integration-test}] [INFO] Failsafe report directory: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/failsafe-reports> ------------------------------------------------------- T E S T S ------------------------------------------------------- Running integration.ITSpringIntegration Tests run: 2, Failures: 0, Errors: 2, Skipped: 0, Time elapsed: 2.731 sec <<< FAILURE! Results : Tests in error: testOsgiPlatformStarts(integration.ITSpringIntegration) testServiceReferencesExist(integration.ITSpringIntegration) Tests run: 2, Failures: 0, Errors: 2, Skipped: 0 [WARNING] File encoding has not been set, using platform encoding UTF-8, i.e. build is platform dependent! [INFO] [failsafe:verify {execution: verify}] [INFO] Failsafe report directory: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/failsafe-reports> [WARNING] File encoding has not been set, using platform encoding UTF-8, i.e. build is platform dependent! [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/pom.xml> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Model impl/modules/org.cytoscape$model-impl/builds/2010-11-02_18-01-25/archive/org.cytoscape/model-impl/3.0.0-alpha2-SNAPSHOT/pom.xml [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/model-impl-3.0.0-alpha2-SNAPSHOT.jar> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Model impl/modules/org.cytoscape$model-impl/builds/2010-11-02_18-01-25/archive/org.cytoscape/model-impl/3.0.0-alpha2-SNAPSHOT/model-impl-3.0.0-alpha2-SNAPSHOT.jar [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/model-impl-3.0.0-alpha2-SNAPSHOT-javadoc.jar> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Model impl/modules/org.cytoscape$model-impl/builds/2010-11-02_18-01-25/archive/org.cytoscape/model-impl/3.0.0-alpha2-SNAPSHOT/model-impl-3.0.0-alpha2-SNAPSHOT-javadoc.jar [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/model-impl-3.0.0-alpha2-SNAPSHOT-sources.jar> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Model impl/modules/org.cytoscape$model-impl/builds/2010-11-02_18-01-25/archive/org.cytoscape/model-impl/3.0.0-alpha2-SNAPSHOT/model-impl-3.0.0-alpha2-SNAPSHOT-sources.jar [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/model-impl-3.0.0-alpha2-SNAPSHOT-tests.jar> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Model impl/modules/org.cytoscape$model-impl/builds/2010-11-02_18-01-25/archive/org.cytoscape/model-impl/3.0.0-alpha2-SNAPSHOT/model-impl-3.0.0-alpha2-SNAPSHOT-tests.jar [INFO] ------------------------------------------------------------------------ [ERROR] BUILD FAILURE [INFO] ------------------------------------------------------------------------ [INFO] There are test failures. Please refer to <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/failsafe-reports> for the individual test results. [INFO] ------------------------------------------------------------------------ [INFO] For more information, run Maven with the -e switch [INFO] ------------------------------------------------------------------------ [INFO] Total time: 41 seconds [INFO] Finished at: Tue Nov 02 18:02:08 EDT 2010 [INFO] Final Memory: 75M/724M [INFO] ------------------------------------------------------------------------ Waiting for Hudson to finish collecting data Sending e-mails to: [email protected] channel stopped [trunk] $ /R1/tools/maven/apache-maven-2.1.0/bin/mvn org.codehaus.sonar:sonar-maven-plugin:1.8:sonar -Dsonar.jdbc.driver=com.mysql.jdbc.Driver -Dsonar.jdbc.username=sonar -Dsonar.jdbc.password=deploysonar -Dsonar.jdbc.url=jdbc:mysql://localhost:3306/sonar -Dsonar.host.url=http://localhost:8021/sonar/ -Dsonar.skipInstall=true [INFO] Scanning for projects... WAGON_VERSION: 1.0-beta-2 [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.model-impl [INFO] task-segment: [org.codehaus.sonar:sonar-maven-plugin:1.8:sonar] (aggregator-style) [INFO] ------------------------------------------------------------------------ [INFO] [sonar:sonar] [INFO] Sonar host: http://localhost:8021/sonar [INFO] Sonar version: 2.2 [INFO] [sonar-core:internal] [INFO] Database dialect class org.sonar.api.database.dialect.MySql [INFO] ------------- Analyzing org.cytoscape.model-impl [INFO] Selected quality profile : Cytoscape, language=java [INFO] Configure maven plugins... [INFO] Sensor JavaSourceImporter... [INFO] Sensor JavaSourceImporter done: 516 ms [INFO] Sensor AsynchronousMeasuresSensor... [INFO] Sensor AsynchronousMeasuresSensor done: 267 ms [INFO] Sensor SquidSensor... [INFO] Java AST scan... [INFO] Java AST scan done: 650 ms [INFO] Java bytecode scan... [INFO] Java bytecode scan done: 137 ms [INFO] Squid extraction... [INFO] Package design analysis... [INFO] Package design analysis done: 7 ms [INFO] Squid extraction done: 335 ms [INFO] Sensor SquidSensor done: 1177 ms [INFO] Sensor ProfileSensor... [INFO] Sensor ProfileSensor done: 25 ms [INFO] Sensor ProjectLinksSensor... [INFO] Sensor ProjectLinksSensor done: 8 ms [INFO] Sensor VersionEventsSensor... [INFO] Sensor VersionEventsSensor done: 34 ms [INFO] Sensor Maven dependencies... [INFO] Sensor Maven dependencies done: 274 ms [INFO] Execute maven plugin findbugs-maven-plugin... [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.model-impl [INFO] task-segment: [org.codehaus.mojo:findbugs-maven-plugin:2.3.1:findbugs] [INFO] ------------------------------------------------------------------------ [INFO] Preparing findbugs:findbugs [INFO] [resources:resources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 3 resources [INFO] Copying 1 resource [INFO] [pax:compile] [INFO] Nothing to compile - all classes are up to date [INFO] [findbugs:findbugs] [INFO] Locale is en [java] Warnings generated: 3 [INFO] Execute maven plugin findbugs-maven-plugin done: 13345 ms [INFO] Sensor FindbugsSensor... [INFO] Sensor FindbugsSensor done: 194 ms [INFO] Sensor CheckstyleSensor... [INFO] Execute Checkstyle 5.1... [INFO] Checkstyle output report: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/sonar/checkstyle-result.xml> [INFO] Checkstyle configuration: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/sonar/checkstyle.xml> [INFO] Execute Checkstyle 5.1 done: 822 ms [INFO] Sensor CheckstyleSensor done: 955 ms [INFO] Sensor PmdSensor... [INFO] Execute PMD 4.2.5... [INFO] Java version: 1.6 [INFO] PMD configuration: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/sonar/pmd.xml> [INFO] PMD output report: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/sonar/pmd-result.xml> [INFO] Execute PMD 4.2.5 done: 2897 ms [INFO] Sensor PmdSensor done: 2972 ms [INFO] Execute maven plugin cobertura-maven-plugin... [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.model-impl [INFO] task-segment: [org.codehaus.mojo:cobertura-maven-plugin::cobertura] [INFO] ------------------------------------------------------------------------ [INFO] Preparing cobertura:cobertura [INFO] [resources:resources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 3 resources [INFO] Copying 1 resource [INFO] [pax:compile] [INFO] Nothing to compile - all classes are up to date [INFO] [cobertura:instrument] [INFO] Cobertura 1.9.2 - GNU GPL License (NO WARRANTY) - See COPYRIGHT file Instrumenting 16 files to <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/generated-classes/cobertura> Cobertura: Saved information on 16 classes. Instrument time: 259ms [INFO] Instrumentation was successful. [INFO] [build-helper:add-test-source {execution: add-test-source}] [INFO] Test Source directory: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/src/integration/java> added. [INFO] [resources:testResources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] skip non existing resourceDirectory <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/src/test/resources> [INFO] [pax:testCompile] [INFO] Nothing to compile - all classes are up to date [INFO] [surefire:test] [INFO] Surefire report directory: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/surefire-reports> ------------------------------------------------------- T E S T S ------------------------------------------------------- Running org.cytoscape.model.CyEdgeTest Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.156 sec Running org.cytoscape.model.CyNodeTest Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.192 sec Running org.cytoscape.model.CyTableManagerTest Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.01 sec Running org.cytoscape.model.TestCyNetworkFactory Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.01 sec Running org.cytoscape.model.GraphObjectTest Tests run: 5, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.016 sec Running org.cytoscape.model.subnetwork.CySubNetworkCyNetworkTest Tests run: 31, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.129 sec Running org.cytoscape.model.IdentifiableTest Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.006 sec Running org.cytoscape.model.CyTableTest Tests run: 15, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.025 sec Running org.cytoscape.model.subnetwork.CySubNetworkTest Tests run: 14, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.061 sec Running org.cytoscape.model.CyNetworkTest Tests run: 31, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.092 sec Running org.cytoscape.model.subnetwork.CyRootNetworkCyNetworkTest Tests run: 31, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.079 sec Running org.cytoscape.model.subnetwork.CyRootNetworkTest Tests run: 17, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.05 sec Results : Tests run: 161, Failures: 0, Errors: 0, Skipped: 0 [INFO] [cobertura:cobertura] [INFO] Cobertura 1.9.2 - GNU GPL License (NO WARRANTY) - See COPYRIGHT file Cobertura: Loaded information on 16 classes. Report time: 639ms [INFO] Cobertura Report generation was successful. [INFO] Execute maven plugin cobertura-maven-plugin done: 4567 ms [INFO] Sensor CoberturaSensor... [INFO] parsing <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/site/cobertura/coverage.xml> [INFO] Sensor CoberturaSensor done: 299 ms [INFO] Sensor CpdSensor... [INFO] Sensor CpdSensor done: 176 ms [INFO] Execute maven plugin taglist-maven-plugin... [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.model-impl [INFO] task-segment: [org.codehaus.mojo:taglist-maven-plugin:2.4:taglist] [INFO] ------------------------------------------------------------------------ [WARNING] DEPRECATED [tags]: No reason given [INFO] [taglist:taglist] [WARNING] Using legacy tag format. This is not recommended. [INFO] Execute maven plugin taglist-maven-plugin done: 4055 ms [INFO] Sensor org.sonar.plugins.taglist.taglistsen...@65334b1a... [INFO] Sensor org.sonar.plugins.taglist.taglistsen...@65334b1a done: 69 ms [INFO] Sensor SurefireSensor... [INFO] parsing <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/surefire-reports> [INFO] Sensor SurefireSensor done: 91 ms [INFO] Execute decorators... [INFO] ANALYSIS SUCCESSFUL, you can browse http://localhost:8021/sonar/ [INFO] Database optimization... [INFO] Database optimization done: 2308 ms [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESSFUL [INFO] ------------------------------------------------------------------------ [INFO] Total time: 41 seconds [INFO] Finished at: Tue Nov 02 18:03:01 EDT 2010 [INFO] Final Memory: 89M/775M [INFO] ------------------------------------------------------------------------ -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To post to this group, send email to [email protected]. 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