See <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/1176/>
------------------------------------------ <===[HUDSON REMOTING CAPACITY]===> channel started Executing Maven: -B -f <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/pom.xml> deploy [INFO] Scanning for projects... WAGON_VERSION: 1.0-beta-2 [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.layout-cytoscape-impl [csplugins.layout] [INFO] task-segment: [deploy] [INFO] ------------------------------------------------------------------------ [INFO] [resources:resources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 2 resources [INFO] [pax:compile] [INFO] Compiling 23 source files to <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/classes> [INFO] [resources:testResources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] skip non existing resourceDirectory <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/src/test/resources> [INFO] [pax:testCompile] [INFO] No sources to compile [INFO] [surefire:test] [INFO] No tests to run. [HUDSON] Recording test results [INFO] [bundle:bundle] [INFO] [javadoc:jar {execution: attach-javadocs}] [ERROR] Error fetching link: http://cytoscape.wodaklab.org/javadoc/package-list. Ignored it. Loading source files for package csplugins.layout.algorithms.circularLayout... Loading source files for package csplugins.layout.algorithms.bioLayout... Loading source files for package csplugins.layout.algorithms.graphPartition... Loading source files for package csplugins.layout.algorithms.hierarchicalLayout... Loading source files for package csplugins.layout.algorithms... Loading source files for package csplugins.layout... Constructing Javadoc information... Standard Doclet version 1.6.0_20 Building tree for all the packages and classes... Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/circularLayout//CircularLayoutAlgorithm.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/circularLayout//CircularLayoutAlgorithmTask.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/bioLayout//BioLayoutAlgorithm.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/bioLayout//BioLayoutFRAlgorithm.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/bioLayout//BioLayoutFRAlgorithmTask.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/bioLayout//BioLayoutKKAlgorithm.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/bioLayout//BioLayoutKKAlgorithmTask.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/graphPartition//AttributeCircleLayout.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/graphPartition//AttributeCircleLayoutTask.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/graphPartition//DegreeSortedCircleLayout.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/graphPartition//DegreeSortedCircleLayoutTask.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/graphPartition//ISOMLayout.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/graphPartition//ISOMLayoutTask.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/graphPartition//ISOMLayoutTask.ISOMVertexData.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/graphPartition//Layout.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/hierarchicalLayout//Edge.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/hierarchicalLayout//Graph.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/hierarchicalLayout//HierarchicalLayoutAlgorithm.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/hierarchicalLayout//HierarchicalLayoutAlgorithmTask.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms//GroupAttributesLayout.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms//GroupAttributesLayoutTask.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms//StackedNodeLayout.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms//StackedNodeLayoutTask.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout//Profile.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/overview-frame.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout//package-frame.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout//package-summary.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout//package-tree.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms//package-frame.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms//package-summary.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms//package-tree.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/bioLayout//package-frame.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/bioLayout//package-summary.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/bioLayout//package-tree.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/circularLayout//package-frame.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/circularLayout//package-summary.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/circularLayout//package-tree.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/graphPartition//package-frame.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/graphPartition//package-summary.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/graphPartition//package-tree.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/hierarchicalLayout//package-frame.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/hierarchicalLayout//package-summary.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/hierarchicalLayout//package-tree.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/constant-values.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/circularLayout//class-use/CircularLayoutAlgorithmTask.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/circularLayout//class-use/CircularLayoutAlgorithm.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/bioLayout//class-use/BioLayoutKKAlgorithmTask.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/bioLayout//class-use/BioLayoutFRAlgorithm.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/bioLayout//class-use/BioLayoutFRAlgorithmTask.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/bioLayout//class-use/BioLayoutKKAlgorithm.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/bioLayout//class-use/BioLayoutAlgorithm.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/graphPartition//class-use/AttributeCircleLayoutTask.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/graphPartition//class-use/ISOMLayoutTask.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/graphPartition//class-use/ISOMLayoutTask.ISOMVertexData.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/graphPartition//class-use/AttributeCircleLayout.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/graphPartition//class-use/Layout.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/graphPartition//class-use/ISOMLayout.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/graphPartition//class-use/DegreeSortedCircleLayout.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/graphPartition//class-use/DegreeSortedCircleLayoutTask.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/hierarchicalLayout//class-use/Graph.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/hierarchicalLayout//class-use/HierarchicalLayoutAlgorithmTask.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/hierarchicalLayout//class-use/HierarchicalLayoutAlgorithm.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/hierarchicalLayout//class-use/Edge.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms//class-use/StackedNodeLayoutTask.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms//class-use/GroupAttributesLayout.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms//class-use/GroupAttributesLayoutTask.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms//class-use/StackedNodeLayout.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout//class-use/Profile.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout//package-use.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms//package-use.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/bioLayout//package-use.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/circularLayout//package-use.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/graphPartition//package-use.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/csplugins/layout/algorithms/hierarchicalLayout//package-use.html...> Building index for all the packages and classes... Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/overview-tree.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/index-all.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/deprecated-list.html...> Building index for all classes... Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/allclasses-frame.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/allclasses-noframe.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/index.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/overview-summary.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/help-doc.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/apidocs/stylesheet.css...> 20 warnings [WARNING] Javadoc Warnings [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/src/main/java/csplugins/layout/algorithms/bioLayout/BioLayoutAlgorithm.java>:136: warning - @returns is an unknown tag. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/src/main/java/csplugins/layout/algorithms/bioLayout/BioLayoutAlgorithm.java>:197: warning - @param argument "flag" is not a parameter name. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/src/main/java/csplugins/layout/algorithms/bioLayout/BioLayoutFRAlgorithmTask.java>:215: warning - @param argument "value" is not a parameter name. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/src/main/java/csplugins/layout/algorithms/bioLayout/BioLayoutFRAlgorithmTask.java>:236: warning - @param argument "value" is not a parameter name. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/src/main/java/csplugins/layout/algorithms/bioLayout/BioLayoutFRAlgorithmTask.java>:257: warning - @param argument "value" is not a parameter name. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/src/main/java/csplugins/layout/algorithms/bioLayout/BioLayoutKKAlgorithmTask.java>:88: warning - @param argument "supportEdgeWeights" is not a parameter name. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/src/main/java/csplugins/layout/algorithms/graphPartition/AttributeCircleLayout.java>:146: warning - @returns is an unknown tag. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/src/main/java/csplugins/layout/algorithms/graphPartition/ISOMLayoutTask.java>:290: warning - @param argument "nodeIndex" is not a parameter name. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/src/main/java/csplugins/layout/algorithms/hierarchicalLayout/Graph.java>:195: warning - Tag @link: reference not found: csplugins.hierarchicallayout.Edge [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/src/main/java/csplugins/layout/algorithms/hierarchicalLayout/Graph.java>:660: warning - @return tag has no arguments. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/src/main/java/csplugins/layout/algorithms/hierarchicalLayout/Graph.java>:1796: warning - @return tag has no arguments. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/src/main/java/csplugins/layout/algorithms/hierarchicalLayout/Graph.java>:2313: warning - @return tag has no arguments. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/src/main/java/csplugins/layout/algorithms/hierarchicalLayout/HierarchicalLayoutAlgorithm.java>:85: warning - Tag @link: reference not found: csplugins.hierarchicallayout.Graph [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/src/main/java/csplugins/layout/algorithms/hierarchicalLayout/HierarchicalLayoutAlgorithmTask.java>:976: warning - @param argument "taskMonitor" is not a parameter name. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/src/main/java/csplugins/layout/algorithms/StackedNodeLayout.java>:83: warning - @param argument "x_position" is not a parameter name. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/src/main/java/csplugins/layout/algorithms/StackedNodeLayout.java>:83: warning - @param argument "y_start_position" is not a parameter name. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/src/main/java/csplugins/layout/algorithms/StackedNodeLayout.java>:83: warning - @param argument "nodes" is not a parameter name. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/src/main/java/csplugins/layout/algorithms/StackedNodeLayout.java>:71: warning - @param argument "nodes" is not a parameter name. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/src/main/java/csplugins/layout/algorithms/StackedNodeLayout.java>:71: warning - @param argument "x_position" is not a parameter name. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/src/main/java/csplugins/layout/algorithms/StackedNodeLayout.java>:71: warning - @param argument "y_start_position" is not a parameter name. [INFO] Building jar: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/layout-cytoscape-impl-1.0-SNAPSHOT-javadoc.jar> [INFO] Preparing source:jar [WARNING] Removing: jar from forked lifecycle, to prevent recursive invocation. [INFO] No goals needed for project - skipping [INFO] [source:jar {execution: attach-sources}] [INFO] Building jar: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/layout-cytoscape-impl-1.0-SNAPSHOT-sources.jar> [INFO] [install:install] [INFO] Installing <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/layout-cytoscape-impl-1.0-SNAPSHOT.jar> to /home/bturner/.m2/repository/org/cytoscape/layout-cytoscape-impl/1.0-SNAPSHOT/layout-cytoscape-impl-1.0-SNAPSHOT.jar [INFO] Installing <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/layout-cytoscape-impl-1.0-SNAPSHOT-javadoc.jar> to /home/bturner/.m2/repository/org/cytoscape/layout-cytoscape-impl/1.0-SNAPSHOT/layout-cytoscape-impl-1.0-SNAPSHOT-javadoc.jar [INFO] Installing <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/layout-cytoscape-impl-1.0-SNAPSHOT-sources.jar> to /home/bturner/.m2/repository/org/cytoscape/layout-cytoscape-impl/1.0-SNAPSHOT/layout-cytoscape-impl-1.0-SNAPSHOT-sources.jar [INFO] [bundle:install] [INFO] Parsing file:/home/bturner/.m2/repository/repository.xml [Fatal Error] repository.xml:3:1: Premature end of file. org.xml.sax.SAXParseException: Premature end of file. at com.sun.org.apache.xerces.internal.parsers.DOMParser.parse(DOMParser.java:249) at com.sun.org.apache.xerces.internal.jaxp.DocumentBuilderImpl.parse(DocumentBuilderImpl.java:284) at javax.xml.parsers.DocumentBuilder.parse(DocumentBuilder.java:208) at org.apache.felix.obrplugin.ObrUpdate.parseFile(ObrUpdate.java:347) at org.apache.felix.obrplugin.ObrUpdate.parseRepositoryXml(ObrUpdate.java:324) at org.apache.felix.obrplugin.ObrInstall.execute(ObrInstall.java:140) at org.apache.maven.plugin.DefaultPluginManager.executeMojo(DefaultPluginManager.java:483) at hudson.maven.agent.PluginManagerInterceptor.executeMojo(PluginManagerInterceptor.java:182) at org.apache.maven.lifecycle.DefaultLifecycleExecutor.executeGoals(DefaultLifecycleExecutor.java:678) at org.apache.maven.lifecycle.DefaultLifecycleExecutor.executeGoalWithLifecycle(DefaultLifecycleExecutor.java:540) at org.apache.maven.lifecycle.DefaultLifecycleExecutor.executeGoal(DefaultLifecycleExecutor.java:519) at org.apache.maven.lifecycle.DefaultLifecycleExecutor.executeGoalAndHandleFailures(DefaultLifecycleExecutor.java:371) at org.apache.maven.lifecycle.DefaultLifecycleExecutor.executeTaskSegments(DefaultLifecycleExecutor.java:332) at org.apache.maven.lifecycle.DefaultLifecycleExecutor.execute(DefaultLifecycleExecutor.java:181) at org.apache.maven.lifecycle.LifecycleExecutorInterceptor.execute(LifecycleExecutorInterceptor.java:65) at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:356) at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:137) at org.apache.maven.cli.MavenCli.main(MavenCli.java:356) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:597) at org.codehaus.classworlds.Launcher.launchEnhanced(Launcher.java:315) at org.codehaus.classworlds.Launcher.launch(Launcher.java:255) at hudson.maven.agent.Main.launch(Main.java:165) at hudson.maven.MavenBuilder.call(MavenBuilder.java:165) at hudson.maven.MavenModuleSetBuild$Builder.call(MavenModuleSetBuild.java:708) at hudson.maven.MavenModuleSetBuild$Builder.call(MavenModuleSetBuild.java:652) at hudson.remoting.UserRequest.perform(UserRequest.java:114) at hudson.remoting.UserRequest.perform(UserRequest.java:48) at hudson.remoting.Request$2.run(Request.java:270) at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:441) at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303) at java.util.concurrent.FutureTask.run(FutureTask.java:138) at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908) at java.lang.Thread.run(Thread.java:619) [INFO] Writing OBR metadata [INFO] [deploy:deploy] [INFO] Retrieving previous build number from snapshots [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/pom.xml> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Layout impl/modules/org.cytoscape$layout-cytoscape-impl/builds/2010-11-10_21-25-52/archive/org.cytoscape/layout-cytoscape-impl/1.0-SNAPSHOT/pom.xml [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/layout-cytoscape-impl-1.0-SNAPSHOT.jar> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Layout impl/modules/org.cytoscape$layout-cytoscape-impl/builds/2010-11-10_21-25-52/archive/org.cytoscape/layout-cytoscape-impl/1.0-SNAPSHOT/layout-cytoscape-impl-1.0-SNAPSHOT.jar [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/layout-cytoscape-impl-1.0-SNAPSHOT-javadoc.jar> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Layout impl/modules/org.cytoscape$layout-cytoscape-impl/builds/2010-11-10_21-25-52/archive/org.cytoscape/layout-cytoscape-impl/1.0-SNAPSHOT/layout-cytoscape-impl-1.0-SNAPSHOT-javadoc.jar [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/org.cytoscape$layout-cytoscape-impl/ws/target/layout-cytoscape-impl-1.0-SNAPSHOT-sources.jar> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Layout impl/modules/org.cytoscape$layout-cytoscape-impl/builds/2010-11-10_21-25-52/archive/org.cytoscape/layout-cytoscape-impl/1.0-SNAPSHOT/layout-cytoscape-impl-1.0-SNAPSHOT-sources.jar [INFO] ------------------------------------------------------------------------ [ERROR] BUILD ERROR [INFO] ------------------------------------------------------------------------ [INFO] Error retrieving previous build number for artifact 'org.cytoscape:layout-cytoscape-impl:bundle': repository metadata for: 'snapshot org.cytoscape:layout-cytoscape-impl:1.0-SNAPSHOT' could not be retrieved from repository: snapshots due to an error: GET request of: org/cytoscape/layout-cytoscape-impl/1.0-SNAPSHOT/maven-metadata.xml from snapshots failed No space left on device [INFO] ------------------------------------------------------------------------ [INFO] For more information, run Maven with the -e switch [INFO] ------------------------------------------------------------------------ [INFO] Total time: 42 seconds [INFO] Finished at: Wed Nov 10 21:26:37 EST 2010 [INFO] Final Memory: 61M/724M [INFO] ------------------------------------------------------------------------ -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/cytoscape-cvs?hl=en.
