See <http://cytoscape.wodaklab.org/hudson/job/Cy3%20IO%20impl/1711/>
------------------------------------------ [...truncated 69 lines...] A src/main/java/org/cytoscape/io/internal/write/properties/PropertiesWriterImpl.java A src/main/java/org/cytoscape/io/internal/write/graphics A src/main/java/org/cytoscape/io/internal/write/graphics/BitmapWriterFactory.java A src/main/java/org/cytoscape/io/internal/write/graphics/PDFExporter.java A src/main/java/org/cytoscape/io/internal/write/graphics/Exporter.java A src/main/java/org/cytoscape/io/internal/write/graphics/SVGExporter.java A src/main/java/org/cytoscape/io/internal/write/graphics/BitmapWriter.java A src/main/java/org/cytoscape/io/internal/write/graphics/PSExporter.java A src/main/java/org/cytoscape/io/internal/write/PresentationWriterManagerImpl.java A src/main/java/org/cytoscape/io/internal/write/AbstractCyNetworkViewWriterFactory.java A src/main/java/org/cytoscape/io/internal/write/CyNetworkViewWriterManagerImpl.java A src/main/java/org/cytoscape/io/internal/write/AbstractWriterManager.java A src/main/java/org/cytoscape/io/internal/write/SessionWriterManagerImpl.java A src/main/java/org/cytoscape/io/internal/write/CyTableWriterManagerImpl.java A src/main/java/org/cytoscape/io/internal/write/AbstractPropertyWriterFactory.java A src/main/java/org/cytoscape/io/internal/write/PropertyWriterManagerImpl.java A src/main/java/org/cytoscape/io/internal/read A src/main/java/org/cytoscape/io/internal/read/cysession A src/main/java/org/cytoscape/io/internal/read/cysession/CysessionReader.java A src/main/java/org/cytoscape/io/internal/read/cysession/CysessionFileFilter.java A src/main/java/org/cytoscape/io/internal/read/cysession/CysessionReaderFactory.java A src/main/java/org/cytoscape/io/internal/read/gml AU src/main/java/org/cytoscape/io/internal/read/gml/GMLNetworkViewReaderFactory.java AU src/main/java/org/cytoscape/io/internal/read/gml/GMLFileFilter.java A src/main/java/org/cytoscape/io/internal/read/gml/KeyValue.java A src/main/java/org/cytoscape/io/internal/read/gml/GMLNetworkViewReader.java A src/main/java/org/cytoscape/io/internal/read/gml/GMLParser.java A src/main/java/org/cytoscape/io/internal/read/datatable A src/main/java/org/cytoscape/io/internal/read/datatable/CyAttributesReader.java.asdf A src/main/java/org/cytoscape/io/internal/read/datatable/TextDataTableReaderFactory.java A src/main/java/org/cytoscape/io/internal/read/datatable/TextDataTableReader.java A src/main/java/org/cytoscape/io/internal/read/sif A src/main/java/org/cytoscape/io/internal/read/sif/Interaction.java A src/main/java/org/cytoscape/io/internal/read/sif/SIFNetworkViewReaderFactory.java A src/main/java/org/cytoscape/io/internal/read/sif/SIFNetworkViewReader.java A src/main/java/org/cytoscape/io/internal/read/session A src/main/java/org/cytoscape/io/internal/read/session/SessionReaderFactoryImpl.java A src/main/java/org/cytoscape/io/internal/read/session/SessionReaderImpl.java A src/main/java/org/cytoscape/io/internal/read/xgmml A src/main/java/org/cytoscape/io/internal/read/xgmml/XGMMLParser.java A src/main/java/org/cytoscape/io/internal/read/xgmml/XGMMLNetworkViewReaderFactory.java A src/main/java/org/cytoscape/io/internal/read/xgmml/HandlerFactory.java A src/main/java/org/cytoscape/io/internal/read/xgmml/ObjectTypeMap.java A src/main/java/org/cytoscape/io/internal/read/xgmml/ObjectType.java A src/main/java/org/cytoscape/io/internal/read/xgmml/MetadataEntries.java A src/main/java/org/cytoscape/io/internal/read/xgmml/RDFTags.java A src/main/java/org/cytoscape/io/internal/read/xgmml/XGMMLFileFilter.java A src/main/java/org/cytoscape/io/internal/read/xgmml/ParseState.java A src/main/java/org/cytoscape/io/internal/read/xgmml/SAXState.java A src/main/java/org/cytoscape/io/internal/read/xgmml/XGMMLNetworkViewReader.java A src/main/java/org/cytoscape/io/internal/read/xgmml/Handler.java A src/main/java/org/cytoscape/io/internal/read/xgmml/MetadataParser.java A src/main/java/org/cytoscape/io/internal/read/xgmml/handler A src/main/java/org/cytoscape/io/internal/read/xgmml/handler/HandleEdgeHandleDone.java A src/main/java/org/cytoscape/io/internal/read/xgmml/handler/HandleEdgeAttribute.java A src/main/java/org/cytoscape/io/internal/read/xgmml/handler/HandleListAttribute.java A src/main/java/org/cytoscape/io/internal/read/xgmml/handler/HandleMapAttribute.java A src/main/java/org/cytoscape/io/internal/read/xgmml/handler/HandleGraph.java A src/main/java/org/cytoscape/io/internal/read/xgmml/handler/HandleListAttributeDone.java A src/main/java/org/cytoscape/io/internal/read/xgmml/handler/HandleNodeGraphics.java A src/main/java/org/cytoscape/io/internal/read/xgmml/handler/HandleMapAttributeDone.java A src/main/java/org/cytoscape/io/internal/read/xgmml/handler/HandleGraphDone.java A src/main/java/org/cytoscape/io/internal/read/xgmml/handler/HandleNodeAttribute.java A src/main/java/org/cytoscape/io/internal/read/xgmml/handler/HandleRDFType.java A src/main/java/org/cytoscape/io/internal/read/xgmml/handler/HandleRDFTitle.java A src/main/java/org/cytoscape/io/internal/read/xgmml/handler/ReadDataManager.java A src/main/java/org/cytoscape/io/internal/read/xgmml/handler/HandleRDFFormat.java A src/main/java/org/cytoscape/io/internal/read/xgmml/handler/AbstractHandler.java A src/main/java/org/cytoscape/io/internal/read/xgmml/handler/HandleEdgeGraphics.java A src/main/java/org/cytoscape/io/internal/read/xgmml/handler/HandleNode.java A src/main/java/org/cytoscape/io/internal/read/xgmml/handler/HandleComplexAttribute.java A src/main/java/org/cytoscape/io/internal/read/xgmml/handler/HandleRDFSource.java A src/main/java/org/cytoscape/io/internal/read/xgmml/handler/HandleGroup.java A src/main/java/org/cytoscape/io/internal/read/xgmml/handler/HandleComplexAttributeDone.java A src/main/java/org/cytoscape/io/internal/read/xgmml/handler/HandleGroupDone.java A src/main/java/org/cytoscape/io/internal/read/xgmml/handler/HandleGroupNode.java A src/main/java/org/cytoscape/io/internal/read/xgmml/handler/HandleEdge.java A src/main/java/org/cytoscape/io/internal/read/xgmml/handler/HandleRDFDate.java A src/main/java/org/cytoscape/io/internal/read/xgmml/handler/HandleRDF.java A src/main/java/org/cytoscape/io/internal/read/xgmml/handler/HandleEdgeHandleList.java A src/main/java/org/cytoscape/io/internal/read/xgmml/handler/HandleNetworkAttribute.java A src/main/java/org/cytoscape/io/internal/read/xgmml/handler/HandleRDFIdentifier.java A src/main/java/org/cytoscape/io/internal/read/xgmml/handler/HandleRDFDescription.java A src/main/java/org/cytoscape/io/internal/read/xgmml/handler/HandleEdgeHandle.java A src/main/java/org/cytoscape/io/internal/read/xgmml/handler/AttributeValueUtil.java A src/main/java/org/cytoscape/io/internal/read/CopyInputStream.java A src/main/java/org/cytoscape/io/internal/read/bookmarks A src/main/java/org/cytoscape/io/internal/read/bookmarks/BookmarkReaderFactory.java A src/main/java/org/cytoscape/io/internal/read/bookmarks/BookmarkReader.java A src/main/java/org/cytoscape/io/internal/read/bookmarks/BookmarkFileFilter.java A src/main/java/org/cytoscape/io/internal/read/properties A src/main/java/org/cytoscape/io/internal/read/properties/PropertiesReader.java A src/main/java/org/cytoscape/io/internal/read/properties/PropertiesFileFilter.java A src/main/java/org/cytoscape/io/internal/read/properties/PropertiesReaderFactory.java A src/main/java/org/cytoscape/io/internal/read/CySessionReaderManagerImpl.java A src/main/java/org/cytoscape/io/internal/read/expression A src/main/java/org/cytoscape/io/internal/read/expression/mRNAMeasurement.java A src/main/java/org/cytoscape/io/internal/read/expression/ExpressionData.java A src/main/java/org/cytoscape/io/internal/read/CyPropertyReaderManagerImpl.java A src/main/java/org/cytoscape/io/internal/read/CyNetworkViewReaderManagerImpl.java A src/main/java/org/cytoscape/io/internal/read/CyTableReaderManagerImpl.java A src/main/java/org/cytoscape/io/internal/read/AbstractPropertyReaderFactory.java A src/main/java/org/cytoscape/io/internal/read/AbstractNetworkViewReaderFactory.java A src/main/java/org/cytoscape/io/internal/read/AbstractTableReaderFactory.java A src/main/java/org/cytoscape/io/internal/read/GenericReaderManager.java A src/main/java/org/cytoscape/io/internal/read/VisualStyleBuilder.java A src/main/java/org/cytoscape/io/internal/read/AbstractPropertyReader.java A src/main/java/org/cytoscape/io/internal/read/AbstractNetworkViewReader.java A src/main/java/org/cytoscape/io/internal/read/MarkSupportedInputStream.java A src/main/java/org/cytoscape/io/internal/read/AbstractTableReader.java A src/main/java/org/cytoscape/io/internal/util A src/main/java/org/cytoscape/io/internal/util/StreamUtilImpl.java A src/main/java/org/cytoscape/io/internal/util/ReadUtils.java A src/main/resources A src/main/resources/META-INF A src/main/resources/META-INF/spring A src/main/resources/META-INF/spring/bundle-context-osgi.xml A src/main/resources/META-INF/spring/bundle-context.xml A pom.xml U . At revision 22822 no change for http://chianti.ucsd.edu/svn/core3/io-impl/trunk since the previous build No emails were triggered. Parsing POMs [trunk] $ java -cp /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven-agent-1.369.jar:/R1/tools/maven/apache-maven-2.1.0/boot/classworlds-1.1.jar hudson.maven.agent.Main /R1/tools/maven/apache-maven-2.1.0 /R1/resources/webservers/tomcat_2/webapps/hudson/WEB-INF/lib/remoting-1.369.jar /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven-interceptor-1.369.jar 45945 /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven2.1-interceptor-1.2.jar <===[HUDSON REMOTING CAPACITY]===> channel started Executing Maven: -B -f <http://cytoscape.wodaklab.org/hudson/job/Cy3%20IO%20impl/ws/trunk/pom.xml> deploy [INFO] Scanning for projects... WAGON_VERSION: 1.0-beta-2 [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.io-impl [org.cytoscape.io] [INFO] task-segment: [deploy] [INFO] ------------------------------------------------------------------------ [INFO] [resources:resources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 2 resources [INFO] Copying 0 resource [INFO] snapshot org.cytoscape:layout-api:1.0-SNAPSHOT: checking for updates from cytoscape_snapshots [INFO] snapshot org.cytoscape:layout-api:1.0-SNAPSHOT: checking for updates from cytoscape_biopax_snapshot [INFO] snapshot org.cytoscape:layout-api:1.0-SNAPSHOT: checking for updates from spring-osgi-snapshots [INFO] snapshot org.cytoscape:parent:1.0-SNAPSHOT: checking for updates from cytoscape_biopax_snapshot [INFO] snapshot org.cytoscape:parent:1.0-SNAPSHOT: checking for updates from spring-osgi-snapshots Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/parent/1.0-SNAPSHOT/parent-1.0-SNAPSHOT.pom [INFO] Unable to find resource 'org.cytoscape:parent:pom:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/parent/1.0-SNAPSHOT/parent-1.0-SNAPSHOT.pom [INFO] Unable to find resource 'org.cytoscape:parent:pom:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi-snapshots//org/cytoscape/parent/1.0-SNAPSHOT/parent-1.0-SNAPSHOT.pom [INFO] Unable to find resource 'org.cytoscape:parent:pom:1.0-SNAPSHOT' in repository spring-osgi-snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi-snapshots/) [INFO] snapshot org.cytoscape:core-task-api:1.0-SNAPSHOT: checking for updates from spring-osgi-snapshots [INFO] snapshot org.cytoscape:viewmodel-api:1.0-SNAPSHOT: checking for updates from spring-osgi-snapshots [INFO] snapshot org.cytoscape:work-api:1.0-SNAPSHOT: checking for updates from spring-osgi-snapshots [INFO] snapshot org.cytoscape:io-api:3.0.0-alpha2-SNAPSHOT: checking for updates from spring-osgi-snapshots [INFO] snapshot org.cytoscape:test-support:1.0-SNAPSHOT: checking for updates from cytoscape_snapshots [INFO] snapshot org.cytoscape:test-support:1.0-SNAPSHOT: checking for updates from cytoscape_biopax_snapshot [INFO] snapshot org.cytoscape:test-support:1.0-SNAPSHOT: checking for updates from spring-osgi-snapshots [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20IO%20impl/ws/trunk/pom.xml> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 IO impl/modules/org.cytoscape$io-impl/builds/2010-11-11_20-11-54/archive/org.cytoscape/io-impl/1.0-SNAPSHOT/pom.xml [INFO] ------------------------------------------------------------------------ [ERROR] BUILD ERROR [INFO] ------------------------------------------------------------------------ [INFO] Error building POM (may not be this project's POM). Project ID: org.cytoscape:test-support Reason: Error getting POM for 'org.cytoscape:test-support' from the repository: Unable to store local copy of metadata: Error updating group repository metadata org.cytoscape:test-support:pom:1.0-SNAPSHOT for project org.cytoscape:test-support [INFO] ------------------------------------------------------------------------ [INFO] For more information, run Maven with the -e switch [INFO] ------------------------------------------------------------------------ [INFO] Total time: 10 seconds [INFO] Finished at: Thu Nov 11 20:12:07 EST 2010 [INFO] Final Memory: 30M/219M [INFO] ------------------------------------------------------------------------ channel stopped [trunk] $ /R1/tools/maven/apache-maven-2.1.0/bin/mvn org.codehaus.sonar:sonar-maven-plugin:1.8:sonar -Dsonar.jdbc.driver=com.mysql.jdbc.Driver -Dsonar.jdbc.username=sonar -Dsonar.jdbc.password=deploysonar -Dsonar.jdbc.url=jdbc:mysql://localhost:3306/sonar -Dsonar.host.url=http://localhost:8021/sonar/ -Dsonar.skipInstall=true [INFO] Scanning for projects... WAGON_VERSION: 1.0-beta-2 [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.io-impl [org.cytoscape.io] [INFO] task-segment: [org.codehaus.sonar:sonar-maven-plugin:1.8:sonar] (aggregator-style) [INFO] ------------------------------------------------------------------------ [INFO] [sonar:sonar] [INFO] Sonar host: http://localhost:8021/sonar [INFO] Sonar version: 2.2 Downloading: http://localhost:8021/sonar/deploy/maven/org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101111010113/sonar-core-maven-plugin-20101111010113.pom 1863/511b 511b downloaded (sonar-core-maven-plugin-20101111010113.pom) [WARNING] Unable to get resource 'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101111010113' from repository sonar (http://localhost:8021/sonar/deploy/maven): GET request of: org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101111010113/sonar-core-maven-plugin-20101111010113.pom.sha1 from sonar failed Downloading: http://download.java.net/maven/2/org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101111010113/sonar-core-maven-plugin-20101111010113.pom [INFO] Unable to find resource 'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101111010113' in repository maven2-repository.dev.java.net (http://download.java.net/maven/2) Downloading: http://download.java.net/maven/1/org.codehaus.sonar.runtime/poms/sonar-core-maven-plugin-20101111010113.pom [INFO] Unable to find resource 'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101111010113' in repository maven-repository.dev.java.net (http://download.java.net/maven/1) Downloading: http://cytoscape.wodaklab.org/nexus/content/groups/public/org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101111010113/sonar-core-maven-plugin-20101111010113.pom [INFO] Unable to find resource 'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101111010113' in repository central (http://repo1.maven.org/maven2) Downloading: http://localhost:8021/sonar/deploy/maven/org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101111010113/sonar-core-maven-plugin-20101111010113.pom 1863/511b 511b downloaded (sonar-core-maven-plugin-20101111010113.pom) [WARNING] Unable to get resource 'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101111010113' from repository sonar (http://localhost:8021/sonar/deploy/maven): GET request of: org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101111010113/sonar-core-maven-plugin-20101111010113.pom.sha1 from sonar failed Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/releases//org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101111010113/sonar-core-maven-plugin-20101111010113.pom [INFO] Unable to find resource 'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101111010113' in repository cytoscape_releases (http://cytoscape.wodaklab.org/nexus/content/repositories/releases/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/thirdparty//org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101111010113/sonar-core-maven-plugin-20101111010113.pom [INFO] Unable to find resource 'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101111010113' in repository cytoscape_thirdparty (http://cytoscape.wodaklab.org/nexus/content/repositories/thirdparty/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-release//org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101111010113/sonar-core-maven-plugin-20101111010113.pom [INFO] Unable to find resource 'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101111010113' in repository cytoscape_biopax_release (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-release/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/ops4j-release//org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101111010113/sonar-core-maven-plugin-20101111010113.pom [INFO] Unable to find resource 'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101111010113' in repository ops4j-release (http://cytoscape.wodaklab.org/nexus/content/repositories/ops4j-release/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/l2fprod-release//org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101111010113/sonar-core-maven-plugin-20101111010113.pom [INFO] Unable to find resource 'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101111010113' in repository l2fprod-release (http://cytoscape.wodaklab.org/nexus/content/repositories/l2fprod-release/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi//org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101111010113/sonar-core-maven-plugin-20101111010113.pom [INFO] Unable to find resource 'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101111010113' in repository spring-osgi (http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi/) Downloading: http://cytoscape.wodaklab.org/nexus/content/groups/public/org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101111010113/sonar-core-maven-plugin-20101111010113.pom [INFO] Unable to find resource 'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101111010113' in repository central (http://repo1.maven.org/maven2) [INFO] ------------------------------------------------------------------------ [ERROR] BUILD ERROR [INFO] ------------------------------------------------------------------------ [INFO] Can not execute Sonar Embedded error: Unable to build project for plugin 'org.codehaus.sonar.runtime:sonar-core-maven-plugin': POM 'org.codehaus.sonar.runtime:sonar-core-maven-plugin' not found in repository: Unable to download the artifact from any repository org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101111010113 from the specified remote repositories: cytoscape_releases (http://cytoscape.wodaklab.org/nexus/content/repositories/releases/), cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/), cytoscape_thirdparty (http://cytoscape.wodaklab.org/nexus/content/repositories/thirdparty/), cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/), maven2-repository.dev.java.net (http://download.java.net/maven/2), l2fprod-release (http://cytoscape.wodaklab.org/nexus/content/repositories/l2fprod-release/), sonar (http://localhost:8021/sonar/deploy/maven), cytoscape_biopax_release (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-release/), ops4j-release (http://cytoscape.wodaklab.org/nexus/content/repositories/ops4j-release/), spring-osgi-snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi-snapshots/), Nexus (http://cytoscape.wodaklab.org/nexus/content/groups/public), maven-repository.dev.java.net (http://download.java.net/maven/1), spring-osgi (http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi/) for project org.codehaus.sonar.runtime:sonar-core-maven-plugin [INFO] ------------------------------------------------------------------------ [INFO] For more information, run Maven with the -e switch [INFO] ------------------------------------------------------------------------ [INFO] Total time: 8 seconds [INFO] Finished at: Thu Nov 11 20:12:16 EST 2010 [INFO] Final Memory: 11M/213M [INFO] ------------------------------------------------------------------------ -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/cytoscape-cvs?hl=en.
