See <http://cytoscape.wodaklab.org/hudson/job/Spacial/1100/>
------------------------------------------ Started by timer Checking out http://chianti.ucsd.edu/svn/core3/spacial/trunk A osgi.bnd A src A src/test A src/test/java A src/test/java/org A src/test/java/org/cytoscape A src/test/java/org/cytoscape/spacial A src/test/java/org/cytoscape/spacial/internal A src/test/java/org/cytoscape/spacial/internal/rtree A src/test/java/org/cytoscape/spacial/internal/rtree/ArrayTestMethod1.java A src/test/java/org/cytoscape/spacial/internal/rtree/ArrayTestMethod2.java A src/test/java/org/cytoscape/spacial/internal/rtree/RTreeSerializationPerformance.java A src/test/java/org/cytoscape/spacial/internal/rtree/ArrayTestMethod3.java A src/test/java/org/cytoscape/spacial/internal/rtree/ArrayTestMethod4.java A src/test/java/org/cytoscape/spacial/internal/rtree/NoRTreeQueryPerformance.java A src/test/java/org/cytoscape/spacial/internal/rtree/RTreeUpdatePerformance.java A src/test/java/org/cytoscape/spacial/internal/rtree/RTreeQueryPerformance.java A src/test/java/org/cytoscape/spacial/internal/rtree/BasicQuietRTreeTest.java A src/main A src/main/java A src/main/java/org A src/main/java/org/cytoscape A src/main/java/org/cytoscape/spacial A src/main/java/org/cytoscape/spacial/SpacialIndex2DFactory.java A src/main/java/org/cytoscape/spacial/SpacialEntry2DEnumerator.java A src/main/java/org/cytoscape/spacial/SpacialIndex2D.java A src/main/java/org/cytoscape/spacial/internal A src/main/java/org/cytoscape/spacial/internal/rtree A src/main/java/org/cytoscape/spacial/internal/rtree/ObjStack.java A src/main/java/org/cytoscape/spacial/internal/rtree/RTree.java A src/main/java/org/cytoscape/spacial/internal/rtree/RTreeFactory.java A src/main/resources A src/main/resources/META-INF A src/main/resources/META-INF/spring A src/main/resources/META-INF/spring/bundle-context-osgi.xml A src/main/resources/META-INF/spring/bundle-context.xml A pom.xml U . At revision 22836 no change for http://chianti.ucsd.edu/svn/core3/spacial/trunk since the previous build No emails were triggered. Parsing POMs [trunk] $ java -cp /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven-agent-1.369.jar:/R1/tools/maven/apache-maven-2.1.0/boot/classworlds-1.1.jar hudson.maven.agent.Main /R1/tools/maven/apache-maven-2.1.0 /R1/resources/webservers/tomcat_2/webapps/hudson/WEB-INF/lib/remoting-1.369.jar /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven-interceptor-1.369.jar 35111 /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven2.1-interceptor-1.2.jar <===[HUDSON REMOTING CAPACITY]===> channel started Executing Maven: -B -f <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/pom.xml> deploy [INFO] Scanning for projects... WAGON_VERSION: 1.0-beta-2 [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.spacial [INFO] task-segment: [deploy] [INFO] ------------------------------------------------------------------------ [INFO] [resources:resources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 2 resources [INFO] Copying 0 resource [INFO] [pax:compile] [INFO] Compiling 6 source files to <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/classes> [INFO] [resources:testResources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] skip non existing resourceDirectory <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/src/test/resources> [INFO] [pax:testCompile] [INFO] Compiling 9 source files to <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/test-classes> [INFO] [surefire:test] [INFO] Surefire report directory: <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/surefire-reports> ------------------------------------------------------- T E S T S ------------------------------------------------------- Running org.cytoscape.spacial.internal.rtree.BasicQuietRTreeTest Tests run: 0, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.014 sec Results : Tests run: 0, Failures: 0, Errors: 0, Skipped: 0 [HUDSON] Recording test results [INFO] [bundle:bundle] [INFO] [javadoc:jar {execution: attach-javadocs}] [ERROR] Error fetching link: http://java.sun.com/javase/6/docs/api/package-list. Ignored it. [ERROR] Error fetching link: http://cytoscape.wodaklab.org/javadoc/package-list. Ignored it. Loading source files for package org.cytoscape.spacial.internal.rtree... Loading source files for package org.cytoscape.spacial... Constructing Javadoc information... Standard Doclet version 1.6.0_20 Building tree for all the packages and classes... Generating <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/apidocs/org/cytoscape/spacial/internal/rtree//RTree.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/apidocs/org/cytoscape/spacial/internal/rtree//RTreeFactory.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/apidocs/org/cytoscape/spacial//SpacialEntry2DEnumerator.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/apidocs/org/cytoscape/spacial//SpacialIndex2D.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/apidocs/org/cytoscape/spacial//SpacialIndex2DFactory.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/apidocs/overview-frame.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/apidocs/org/cytoscape/spacial//package-frame.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/apidocs/org/cytoscape/spacial//package-summary.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/apidocs/org/cytoscape/spacial//package-tree.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/apidocs/org/cytoscape/spacial/internal/rtree//package-frame.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/apidocs/org/cytoscape/spacial/internal/rtree//package-summary.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/apidocs/org/cytoscape/spacial/internal/rtree//package-tree.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/apidocs/constant-values.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/apidocs/serialized-form.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/apidocs/org/cytoscape/spacial/internal/rtree//class-use/RTreeFactory.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/apidocs/org/cytoscape/spacial/internal/rtree//class-use/RTree.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/apidocs/org/cytoscape/spacial//class-use/SpacialEntry2DEnumerator.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/apidocs/org/cytoscape/spacial//class-use/SpacialIndex2D.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/apidocs/org/cytoscape/spacial//class-use/SpacialIndex2DFactory.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/apidocs/org/cytoscape/spacial//package-use.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/apidocs/org/cytoscape/spacial/internal/rtree//package-use.html...> Building index for all the packages and classes... Generating <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/apidocs/overview-tree.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/apidocs/index-all.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/apidocs/deprecated-list.html...> Building index for all classes... Generating <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/apidocs/allclasses-frame.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/apidocs/allclasses-noframe.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/apidocs/index.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/apidocs/overview-summary.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/apidocs/help-doc.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/apidocs/stylesheet.css...> [INFO] Building jar: <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/spacial-1.0-SNAPSHOT-javadoc.jar> [INFO] Preparing source:jar [WARNING] Removing: jar from forked lifecycle, to prevent recursive invocation. [INFO] No goals needed for project - skipping [INFO] [source:jar {execution: attach-sources}] [INFO] Building jar: <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/spacial-1.0-SNAPSHOT-sources.jar> [INFO] [install:install] [INFO] Installing <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/spacial-1.0-SNAPSHOT.jar> to /home/bturner/.m2/repository/org/cytoscape/spacial/1.0-SNAPSHOT/spacial-1.0-SNAPSHOT.jar [INFO] Installing <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/spacial-1.0-SNAPSHOT-javadoc.jar> to /home/bturner/.m2/repository/org/cytoscape/spacial/1.0-SNAPSHOT/spacial-1.0-SNAPSHOT-javadoc.jar [INFO] Installing <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/spacial-1.0-SNAPSHOT-sources.jar> to /home/bturner/.m2/repository/org/cytoscape/spacial/1.0-SNAPSHOT/spacial-1.0-SNAPSHOT-sources.jar [INFO] [bundle:install] [INFO] Parsing file:/home/bturner/.m2/repository/repository.xml [INFO] Installing org/cytoscape/spacial/1.0-SNAPSHOT/spacial-1.0-SNAPSHOT.jar [INFO] Writing OBR metadata [INFO] [deploy:deploy] [INFO] Retrieving previous build number from snapshots Uploading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/org/cytoscape/spacial/1.0-SNAPSHOT/spacial-1.0-20101114.015812-1068.jar 23K uploaded (spacial-1.0-20101114.015812-1068.jar) [INFO] Retrieving previous metadata from snapshots [INFO] Uploading repository metadata for: 'snapshot org.cytoscape:spacial:1.0-SNAPSHOT' [INFO] Uploading project information for spacial 1.0-20101114.015812-1068 [INFO] Retrieving previous metadata from snapshots [INFO] Uploading repository metadata for: 'artifact org.cytoscape:spacial' [INFO] Retrieving previous build number from snapshots Uploading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/org/cytoscape/spacial/1.0-SNAPSHOT/spacial-1.0-20101114.015812-1068-javadoc.jar 53K uploaded (spacial-1.0-20101114.015812-1068-javadoc.jar) [INFO] Retrieving previous build number from snapshots Uploading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/org/cytoscape/spacial/1.0-SNAPSHOT/spacial-1.0-20101114.015812-1068-sources.jar 25K uploaded (spacial-1.0-20101114.015812-1068-sources.jar) [INFO] [bundle:deploy] [INFO] Remote OBR update disabled (enable with -DremoteOBR) [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/pom.xml> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Spacial/modules/org.cytoscape$spacial/builds/2010-11-13_20-57-31/archive/org.cytoscape/spacial/1.0-SNAPSHOT/pom.xml [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/spacial-1.0-SNAPSHOT.jar> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Spacial/modules/org.cytoscape$spacial/builds/2010-11-13_20-57-31/archive/org.cytoscape/spacial/1.0-20101114.015812-1068/spacial-1.0-SNAPSHOT.jar [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/spacial-1.0-SNAPSHOT-javadoc.jar> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Spacial/modules/org.cytoscape$spacial/builds/2010-11-13_20-57-31/archive/org.cytoscape/spacial/1.0-20101114.015812-1068/spacial-1.0-SNAPSHOT-javadoc.jar [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Spacial/ws/trunk/target/spacial-1.0-SNAPSHOT-sources.jar> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Spacial/modules/org.cytoscape$spacial/builds/2010-11-13_20-57-31/archive/org.cytoscape/spacial/1.0-20101114.015812-1068/spacial-1.0-SNAPSHOT-sources.jar [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESSFUL [INFO] ------------------------------------------------------------------------ [INFO] Total time: 40 seconds [INFO] Finished at: Sat Nov 13 20:58:14 EST 2010 [INFO] Final Memory: 62M/727M [INFO] ------------------------------------------------------------------------ Sending e-mails to: [email protected] channel stopped [trunk] $ /R1/tools/maven/apache-maven-2.1.0/bin/mvn org.codehaus.sonar:sonar-maven-plugin:1.8:sonar -Dsonar.jdbc.driver=com.mysql.jdbc.Driver -Dsonar.jdbc.username=sonar -Dsonar.jdbc.password=deploysonar -Dsonar.jdbc.url=jdbc:mysql://localhost:3306/sonar -Dsonar.host.url=http://localhost:8021/sonar/ -Dsonar.skipInstall=true [INFO] Scanning for projects... WAGON_VERSION: 1.0-beta-2 [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.spacial [INFO] task-segment: [org.codehaus.sonar:sonar-maven-plugin:1.8:sonar] (aggregator-style) [INFO] ------------------------------------------------------------------------ [INFO] [sonar:sonar] [INFO] Sonar host: http://localhost:8021/sonar [INFO] Sonar version: 2.2 [INFO] [sonar-core:internal] [INFO] Database dialect class org.sonar.api.database.dialect.MySql [INFO] ------------- Analyzing org.cytoscape.spacial [INFO] Selected quality profile : Cytoscape, language=java [INFO] Configure maven plugins... [INFO] Sensor JavaSourceImporter... [INFO] Sensor JavaSourceImporter done: 516 ms [INFO] Sensor AsynchronousMeasuresSensor... [INFO] Sensor AsynchronousMeasuresSensor done: 64 ms [INFO] Sensor SquidSensor... [INFO] Java AST scan... [INFO] Java AST scan done: 642 ms [INFO] Java bytecode scan... [INFO] Java bytecode scan done: 84 ms [INFO] Squid extraction... [INFO] Package design analysis... [INFO] Package design analysis done: 22 ms [INFO] Squid extraction done: 246 ms [INFO] Sensor SquidSensor done: 1023 ms [INFO] Sensor ProfileSensor... [INFO] Sensor ProfileSensor done: 25 ms [INFO] Sensor ProjectLinksSensor... [INFO] Sensor ProjectLinksSensor done: 7 ms [INFO] Sensor VersionEventsSensor... [INFO] Sensor VersionEventsSensor done: 34 ms [INFO] Sensor Maven dependencies... [INFO] Sensor Maven dependencies done: 67 ms [INFO] Execute maven plugin findbugs-maven-plugin... [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.spacial [INFO] task-segment: [org.codehaus.mojo:findbugs-maven-plugin:2.3.1:findbugs] [INFO] ------------------------------------------------------------------------ [INFO] Preparing findbugs:findbugs [INFO] ------------------------------------------------------------------------ [ERROR] BUILD ERROR [INFO] ------------------------------------------------------------------------ [INFO] Can not execute Sonar Embedded error: Unable to execute maven plugin The plugin 'org.codehaus.mojo:cobertura-maven-plugin' does not exist or no valid version could be found [INFO] ------------------------------------------------------------------------ [INFO] For more information, run Maven with the -e switch [INFO] ------------------------------------------------------------------------ [INFO] Total time: 8 seconds [INFO] Finished at: Sat Nov 13 20:58:34 EST 2010 [INFO] Final Memory: 45M/491M [INFO] ------------------------------------------------------------------------ -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. 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