See <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Swing%20Application%20API/13/changes>
Changes: [mes] removing unused dir ------------------------------------------ [...truncated 63 lines...] [INFO] snapshot org.cytoscape:model-api:3.0.0-alpha2-SNAPSHOT: checking for updates from spring-osgi-snapshots [INFO] snapshot org.cytoscape:event-api:3.0.0-alpha2-SNAPSHOT: checking for updates from cytoscape_snapshots [INFO] snapshot org.cytoscape:event-api:3.0.0-alpha2-SNAPSHOT: checking for updates from cytoscape_biopax_snapshot [INFO] snapshot org.cytoscape:event-api:3.0.0-alpha2-SNAPSHOT: checking for updates from spring-osgi-snapshots [INFO] snapshot org.cytoscape:presentation-api:3.0.0-alpha2-SNAPSHOT: checking for updates from cytoscape_snapshots [INFO] snapshot org.cytoscape:presentation-api:3.0.0-alpha2-SNAPSHOT: checking for updates from cytoscape_biopax_snapshot [INFO] snapshot org.cytoscape:presentation-api:3.0.0-alpha2-SNAPSHOT: checking for updates from spring-osgi-snapshots [INFO] [pax:compile] [INFO] Compiling 21 source files to <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Swing%20Application%20API/ws/trunk/target/classes> [INFO] [resources:testResources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] skip non existing resourceDirectory <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Swing%20Application%20API/ws/trunk/src/test/resources> [INFO] [pax:testCompile] [INFO] No sources to compile [INFO] [surefire:test] [INFO] No tests to run. [HUDSON] Recording test results [INFO] [bundle:bundle] [WARNING] Warning building bundle org.cytoscape:swing-application-api:bundle:1.0-SNAPSHOT : Instructions for Export-Package that are never used: org\.cytoscape [WARNING] Warning building bundle org.cytoscape:swing-application-api:bundle:1.0-SNAPSHOT : Instructions for Private-Package that are never used: org\.cytoscape\.internal\..*|org\.cytoscape\.internal [WARNING] Warning building bundle org.cytoscape:swing-application-api:bundle:1.0-SNAPSHOT : Superfluous export-package instructions: [org.cytoscape] [INFO] [javadoc:jar {execution: attach-javadocs}] [ERROR] Error fetching link: http://java.sun.com/javase/6/docs/api/package-list. Ignored it. [ERROR] Error fetching link: http://cytoscape.wodaklab.org/javadoc/package-list. Ignored it. Loading source files for package org.cytoscape.application.swing.events... Loading source files for package org.cytoscape.application.swing.view.events... Loading source files for package org.cytoscape.application.swing.util... Loading source files for package org.cytoscape.application.swing... Constructing Javadoc information... Standard Doclet version 1.6.0_20 Building tree for all the packages and classes... 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[WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Swing%20Application%20API/ws/trunk/src/main/java/org/cytoscape/application/swing/CytoscapeAction.java>:143: warning - @inheritdoc is an unknown tag -- same as a known tag except for case. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Swing%20Application%20API/ws/trunk/src/main/java/org/cytoscape/application/swing/CytoscapeAction.java>:155: warning - @beaninfo is an unknown tag. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Swing%20Application%20API/ws/trunk/src/main/java/org/cytoscape/application/swing/CytoscapeAction.java>:167: warning - @beaninfo is an unknown tag. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Swing%20Application%20API/ws/trunk/src/main/java/org/cytoscape/application/swing/CytoscapeAction.java>:174: warning - @inheritdoc is an unknown tag -- same as a known tag except for case. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Swing%20Application%20API/ws/trunk/src/main/java/org/cytoscape/application/swing/CytoscapeAction.java>:181: warning - @inheritdoc is an unknown tag -- same as a known tag except for case. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Swing%20Application%20API/ws/trunk/src/main/java/org/cytoscape/application/swing/CytoscapeAction.java>:188: warning - @inheritdoc is an unknown tag -- same as a known tag except for case. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Swing%20Application%20API/ws/trunk/src/main/java/org/cytoscape/application/swing/CytoscapeAction.java>:195: warning - @inheritdoc is an unknown tag -- same as a known tag except for case. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Swing%20Application%20API/ws/trunk/src/main/java/org/cytoscape/application/swing/CytoscapeAction.java>:202: warning - @inheritdoc is an unknown tag -- same as a known tag except for case. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Swing%20Application%20API/ws/trunk/src/main/java/org/cytoscape/application/swing/CytoscapeAction.java>:211: warning - @inheritdoc is an unknown tag -- same as a known tag except for case. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Swing%20Application%20API/ws/trunk/src/main/java/org/cytoscape/application/swing/CytoscapeAction.java>:218: warning - @inheritdoc is an unknown tag -- same as a known tag except for case. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Swing%20Application%20API/ws/trunk/src/main/java/org/cytoscape/application/swing/CytoscapeAction.java>:225: warning - @inheritdoc is an unknown tag -- same as a known tag except for case. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Swing%20Application%20API/ws/trunk/src/main/java/org/cytoscape/application/swing/CytoscapeAction.java>:246: warning - @inheritdoc is an unknown tag -- same as a known tag except for case. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Swing%20Application%20API/ws/trunk/src/main/java/org/cytoscape/application/swing/CytoscapeAction.java>:267: warning - @inheritdoc is an unknown tag -- same as a known tag except for case. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Swing%20Application%20API/ws/trunk/src/main/java/org/cytoscape/application/swing/CytoscapeShutdown.java>:51: warning - Tag @link: reference not found: System.exit [INFO] Building jar: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Swing%20Application%20API/ws/trunk/target/swing-application-api-1.0-SNAPSHOT-javadoc.jar> [INFO] Preparing source:jar [WARNING] Removing: jar from forked lifecycle, to prevent recursive invocation. [INFO] No goals needed for project - skipping [INFO] [source:jar {execution: attach-sources}] [INFO] Building jar: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Swing%20Application%20API/ws/trunk/target/swing-application-api-1.0-SNAPSHOT-sources.jar> [INFO] [install:install] [INFO] Installing <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Swing%20Application%20API/ws/trunk/target/swing-application-api-1.0-SNAPSHOT.jar> to /home/bturner/.m2/repository/org/cytoscape/swing-application-api/1.0-SNAPSHOT/swing-application-api-1.0-SNAPSHOT.jar [INFO] Installing <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Swing%20Application%20API/ws/trunk/target/swing-application-api-1.0-SNAPSHOT-javadoc.jar> to /home/bturner/.m2/repository/org/cytoscape/swing-application-api/1.0-SNAPSHOT/swing-application-api-1.0-SNAPSHOT-javadoc.jar [INFO] Installing <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Swing%20Application%20API/ws/trunk/target/swing-application-api-1.0-SNAPSHOT-sources.jar> to /home/bturner/.m2/repository/org/cytoscape/swing-application-api/1.0-SNAPSHOT/swing-application-api-1.0-SNAPSHOT-sources.jar [INFO] [bundle:install] [INFO] Parsing file:/home/bturner/.m2/repository/repository.xml [INFO] Installing org/cytoscape/swing-application-api/1.0-SNAPSHOT/swing-application-api-1.0-SNAPSHOT.jar [INFO] Writing OBR metadata [INFO] [deploy:deploy] [INFO] Retrieving previous build number from snapshots Uploading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/org/cytoscape/swing-application-api/1.0-SNAPSHOT/swing-application-api-1.0-20101114.230157-10.jar 153K uploaded (swing-application-api-1.0-20101114.230157-10.jar) [INFO] Uploading project information for swing-application-api 1.0-20101114.230157-10 [INFO] Retrieving previous metadata from snapshots [INFO] Uploading repository metadata for: 'snapshot org.cytoscape:swing-application-api:1.0-SNAPSHOT' [INFO] Retrieving previous metadata from snapshots [INFO] Uploading repository metadata for: 'artifact org.cytoscape:swing-application-api' [INFO] Retrieving previous build number from snapshots Uploading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/org/cytoscape/swing-application-api/1.0-SNAPSHOT/swing-application-api-1.0-20101114.230157-10-javadoc.jar 132K uploaded (swing-application-api-1.0-20101114.230157-10-javadoc.jar) [INFO] Retrieving previous build number from snapshots Uploading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/org/cytoscape/swing-application-api/1.0-SNAPSHOT/swing-application-api-1.0-20101114.230157-10-sources.jar 24K uploaded (swing-application-api-1.0-20101114.230157-10-sources.jar) [INFO] [bundle:deploy] [INFO] Remote OBR update disabled (enable with -DremoteOBR) [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Swing%20Application%20API/ws/trunk/pom.xml> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Swing Application API/modules/org.cytoscape$swing-application-api/builds/2010-11-14_18-01-04/archive/org.cytoscape/swing-application-api/1.0-SNAPSHOT/pom.xml [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Swing%20Application%20API/ws/trunk/target/swing-application-api-1.0-SNAPSHOT.jar> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Swing Application API/modules/org.cytoscape$swing-application-api/builds/2010-11-14_18-01-04/archive/org.cytoscape/swing-application-api/1.0-20101114.230157-10/swing-application-api-1.0-SNAPSHOT.jar [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Swing%20Application%20API/ws/trunk/target/swing-application-api-1.0-SNAPSHOT-javadoc.jar> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Swing Application API/modules/org.cytoscape$swing-application-api/builds/2010-11-14_18-01-04/archive/org.cytoscape/swing-application-api/1.0-20101114.230157-10/swing-application-api-1.0-SNAPSHOT-javadoc.jar [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Swing%20Application%20API/ws/trunk/target/swing-application-api-1.0-SNAPSHOT-sources.jar> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Swing Application API/modules/org.cytoscape$swing-application-api/builds/2010-11-14_18-01-04/archive/org.cytoscape/swing-application-api/1.0-20101114.230157-10/swing-application-api-1.0-SNAPSHOT-sources.jar [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESSFUL [INFO] ------------------------------------------------------------------------ [INFO] Total time: 52 seconds [INFO] Finished at: Sun Nov 14 18:01:59 EST 2010 [INFO] Final Memory: 63M/724M [INFO] ------------------------------------------------------------------------ channel stopped [trunk] $ /R1/tools/maven/apache-maven-2.1.0/bin/mvn org.codehaus.sonar:sonar-maven-plugin:1.8:sonar -Dsonar.jdbc.driver=com.mysql.jdbc.Driver -Dsonar.jdbc.username=sonar -Dsonar.jdbc.password=deploysonar -Dsonar.jdbc.url=jdbc:mysql://localhost:3306/sonar -Dsonar.host.url=http://localhost:8021/sonar/ -Dsonar.skipInstall=true [INFO] Scanning for projects... WAGON_VERSION: 1.0-beta-2 [INFO] ------------------------------------------------------------------------ [INFO] Building Cytoscape Swing Application API [INFO] task-segment: [org.codehaus.sonar:sonar-maven-plugin:1.8:sonar] (aggregator-style) [INFO] ------------------------------------------------------------------------ [INFO] [sonar:sonar] [INFO] Sonar host: http://localhost:8021/sonar [INFO] Sonar version: 2.2 Downloading: http://localhost:8021/sonar/deploy/maven/org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101114010106/sonar-core-maven-plugin-20101114010106.pom 1863/512b 512b downloaded (sonar-core-maven-plugin-20101114010106.pom) Downloading: http://localhost:8021/sonar/deploy/maven/org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101114010106/sonar-core-maven-plugin-20101114010106.jar 0/6K 1/6K 1/6K 2/6K 2/6K 3/6K 4/6K 4/6K 5/6K 5/6K 6/6K 6/6K 7/6K 8/6K 6K downloaded (sonar-core-maven-plugin-20101114010106.jar) [INFO] [sonar-core:internal] [INFO] Database dialect class org.sonar.api.database.dialect.MySql [INFO] ------------- Analyzing Cytoscape Swing Application API [INFO] Selected quality profile : Cytoscape, language=java [INFO] Configure maven plugins... [INFO] Sensor JavaSourceImporter... [INFO] Sensor JavaSourceImporter done: 440 ms [INFO] Sensor AsynchronousMeasuresSensor... [INFO] Sensor AsynchronousMeasuresSensor done: 28 ms [INFO] Sensor SquidSensor... [INFO] Java AST scan... [INFO] Java AST scan done: 433 ms [INFO] Java bytecode scan... [WARN] Class '[Lorg/cytoscape/application/swing/CytoPanelName;' is not accessible through the ClassLoader. [WARN] Class '[Lorg/cytoscape/application/swing/CytoPanelState;' is not accessible through the ClassLoader. [INFO] Java bytecode scan done: 122 ms [INFO] Squid extraction... [INFO] Package design analysis... [INFO] Package design analysis done: 29 ms [INFO] Squid extraction done: 447 ms [INFO] Sensor SquidSensor done: 1100 ms [INFO] Sensor ProfileSensor... [INFO] Sensor ProfileSensor done: 24 ms [INFO] Sensor ProjectLinksSensor... [INFO] Sensor ProjectLinksSensor done: 4 ms [INFO] Sensor VersionEventsSensor... [INFO] Sensor VersionEventsSensor done: 37 ms [INFO] Sensor Maven dependencies... [INFO] Sensor Maven dependencies done: 232 ms [INFO] Execute maven plugin findbugs-maven-plugin... [INFO] ------------------------------------------------------------------------ [INFO] Building Cytoscape Swing Application API [INFO] task-segment: [org.codehaus.mojo:findbugs-maven-plugin:2.3.1:findbugs] [INFO] ------------------------------------------------------------------------ [INFO] Preparing findbugs:findbugs [INFO] artifact org.codehaus.mojo:cobertura-maven-plugin: checking for updates from maven2-repository.dev.java.net [INFO] artifact org.codehaus.mojo:cobertura-maven-plugin: checking for updates from maven-repository.dev.java.net [INFO] ------------------------------------------------------------------------ [ERROR] BUILD ERROR [INFO] ------------------------------------------------------------------------ [INFO] Can not execute Sonar Embedded error: Unable to execute maven plugin The plugin 'org.codehaus.mojo:cobertura-maven-plugin' does not exist or no valid version could be found [INFO] ------------------------------------------------------------------------ [INFO] For more information, run Maven with the -e switch [INFO] ------------------------------------------------------------------------ [INFO] Total time: 17 seconds [INFO] Finished at: Sun Nov 14 18:02:18 EST 2010 [INFO] Final Memory: 48M/597M [INFO] ------------------------------------------------------------------------ -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. 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