See <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/103/>
------------------------------------------ [...truncated 387 lines...] Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/model/vocab//class-use/InteractionVocab.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/model/vocab//class-use/CommonVocab.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/model//class-use/Interaction.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/model//class-use/ExternalReference.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/model//class-use/Interactor.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/model//class-use/AttributeBag.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/cyto_mapper//class-use/MapFromCytoscape.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/cyto_mapper//class-use/MapToCytoscape.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/data_mapper//class-use/MapperUtil.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/data_mapper//class-use/MapInteractionsToPsiTwoFive.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/data_mapper//class-use/MapPsiOneToInteractions.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/data_mapper//class-use/MapPsiTwoFiveToInteractions.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/data_mapper//class-use/MapperException.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/data_mapper//class-use/Mapper.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/data_mapper//class-use/SchemaMapper.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/data_mapper//class-use/MapInteractionsToPsiOne.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/util//class-use/ContentReader.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/util//class-use/AttributeUtil.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/util//class-use/DataServiceException.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/plugin//class-use/PsiMiNetworkViewTaskFactory.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/plugin//class-use/PsiMiWriter.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/plugin//class-use/PsiMiCyFileFilter.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/plugin//class-use/SchemaVersion.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/plugin//class-use/PsiMiNetworkWriterFactory.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/plugin//class-use/PsiMiNetworkViewReader.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/ProteinInteractorType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/ProteinInteractorType.Organism.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/ExperimentType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/ExperimentType.Confidence.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/ExperimentType.HostOrganism.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/ObjectFactory.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/LabelType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/FullNameType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/IntervalType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/BaseLocationType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/FeatureType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/ProteinParticipantType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/ProteinParticipantType.Confidence.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/ProteinParticipantType.FeatureList.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/OpenCvType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/CvType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/BioSourceType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/InteractionElementType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/InteractionElementType.Confidence.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/InteractionElementType.ExperimentList.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/InteractionElementType.ParticipantList.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/AvailabilityType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/NamesType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/EntrySet.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/EntrySet.Entry.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/EntrySet.Entry.AvailabilityList.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/EntrySet.Entry.ExperimentList.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/EntrySet.Entry.InteractionList.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/EntrySet.Entry.InteractorList.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/EntrySet.Entry.Source.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/RefType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/DbReferenceType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/AttributeListType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/AttributeListType.Attribute.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/XrefType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/BibrefType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/PositionType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/InteractionElementType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/InteractionElementType.ExperimentList.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/InteractionElementType.InferredInteractionList.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/InteractionElementType.InferredInteractionList.InferredInteraction.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/InteractionElementType.InferredInteractionList.InferredInteraction.Participant.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/InteractionElementType.ParameterList.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/InteractionElementType.ParameterList.Parameter.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/InteractionElementType.ParticipantList.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/EntrySet.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/EntrySet.Entry.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/EntrySet.Entry.AvailabilityList.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/EntrySet.Entry.ExperimentList.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/EntrySet.Entry.InteractionList.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/EntrySet.Entry.InteractionList.Interaction.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/EntrySet.Entry.InteractorList.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/EntrySet.Entry.Source.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/ParticipantType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/ParticipantType.ExperimentalInteractorList.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/ParticipantType.ExperimentalInteractorList.ExperimentalInteractor.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/ParticipantType.ExperimentalPreparationList.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/ParticipantType.ExperimentalPreparationList.ExperimentalPreparation.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/ParticipantType.ExperimentalRoleList.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/ParticipantType.ExperimentalRoleList.ExperimentalRole.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/ParticipantType.FeatureList.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/ParticipantType.HostOrganismList.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/ParticipantType.HostOrganismList.HostOrganism.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/ParticipantType.ParameterList.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/ParticipantType.ParameterList.Parameter.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/ParticipantType.ParticipantIdentificationMethodList.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/ParticipantType.ParticipantIdentificationMethodList.ParticipantIdentificationMethod.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/ConfidenceListType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/ConfidenceListType.Confidence.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/InteractorElementType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/InteractorElementType.Organism.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/IntervalType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/BaseLocationType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/CvType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/ExperimentRefListType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/FullNameType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/ConfidenceType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/LabelType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/ParameterType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/AvailabilityType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/FeatureElementType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/FeatureElementType.FeatureRangeList.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/ExperimentType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/ExperimentType.HostOrganismList.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/ExperimentType.HostOrganismList.HostOrganism.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/ObjectFactory.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/BibrefType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/PositionType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/DbReferenceType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/XrefType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/OpenCvType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/NamesType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/NamesType.Alias.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/BioSourceType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/AttributeListType.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/AttributeListType.Attribute.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/cyto_mapper//package-use.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/data_mapper//package-use.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/model//package-use.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/model/vocab//package-use.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/plugin//package-use.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//package-use.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//package-use.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/org/cytoscape/psi_mi/internal/util//package-use.html...> Building index for all the packages and classes... Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/overview-tree.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/index-all.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/deprecated-list.html...> Building index for all classes... Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/allclasses-frame.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/allclasses-noframe.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/index.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/overview-summary.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/help-doc.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/apidocs/stylesheet.css...> [INFO] Building jar: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/psi-mi-impl-1.0-SNAPSHOT-javadoc.jar> [INFO] Preparing source:jar [WARNING] Removing: jar from forked lifecycle, to prevent recursive invocation. [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/pom.xml> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 PSI-MI impl/modules/org.cytoscape$psi-mi-impl/builds/2010-11-15_20-19-40/archive/org.cytoscape/psi-mi-impl/1.0-SNAPSHOT/pom.xml [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/psi-mi-impl-1.0-SNAPSHOT.jar> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 PSI-MI impl/modules/org.cytoscape$psi-mi-impl/builds/2010-11-15_20-19-40/archive/org.cytoscape/psi-mi-impl/1.0-SNAPSHOT/psi-mi-impl-1.0-SNAPSHOT.jar [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/psi-mi-impl-1.0-SNAPSHOT-javadoc.jar> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 PSI-MI impl/modules/org.cytoscape$psi-mi-impl/builds/2010-11-15_20-19-40/archive/org.cytoscape/psi-mi-impl/1.0-SNAPSHOT/psi-mi-impl-1.0-SNAPSHOT-javadoc.jar [INFO] [jaxb2:xjc {execution: mi1}] [INFO] No changes detected in schema or binding files, skipping source generation. [INFO] [jaxb2:xjc {execution: mi25}] [INFO] No changes detected in schema or binding files, skipping source generation. [INFO] [source:jar {execution: attach-sources}] [INFO] Building jar: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/psi-mi-impl-1.0-SNAPSHOT-sources.jar> [INFO] [install:install] [INFO] Installing <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/psi-mi-impl-1.0-SNAPSHOT.jar> to /home/bturner/.m2/repository/org/cytoscape/psi-mi-impl/1.0-SNAPSHOT/psi-mi-impl-1.0-SNAPSHOT.jar [INFO] Installing <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/psi-mi-impl-1.0-SNAPSHOT-javadoc.jar> to /home/bturner/.m2/repository/org/cytoscape/psi-mi-impl/1.0-SNAPSHOT/psi-mi-impl-1.0-SNAPSHOT-javadoc.jar [INFO] Installing <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/psi-mi-impl-1.0-SNAPSHOT-sources.jar> to /home/bturner/.m2/repository/org/cytoscape/psi-mi-impl/1.0-SNAPSHOT/psi-mi-impl-1.0-SNAPSHOT-sources.jar [INFO] [bundle:install] [INFO] Parsing file:/home/bturner/.m2/repository/repository.xml [INFO] Installing org/cytoscape/psi-mi-impl/1.0-SNAPSHOT/psi-mi-impl-1.0-SNAPSHOT.jar [INFO] Writing OBR metadata [INFO] [deploy:deploy] [INFO] Retrieving previous build number from snapshots Uploading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/org/cytoscape/psi-mi-impl/1.0-SNAPSHOT/psi-mi-impl-1.0-20101116.012037-86.jar 157K uploaded (psi-mi-impl-1.0-20101116.012037-86.jar) [INFO] Uploading project information for psi-mi-impl 1.0-20101116.012037-86 [INFO] Retrieving previous metadata from snapshots [INFO] Uploading repository metadata for: 'artifact org.cytoscape:psi-mi-impl' [INFO] Retrieving previous metadata from snapshots [INFO] Uploading repository metadata for: 'snapshot org.cytoscape:psi-mi-impl:1.0-SNAPSHOT' [INFO] Retrieving previous build number from snapshots Uploading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/org/cytoscape/psi-mi-impl/1.0-SNAPSHOT/psi-mi-impl-1.0-20101116.012037-86-javadoc.jar 729K uploaded (psi-mi-impl-1.0-20101116.012037-86-javadoc.jar) [INFO] Retrieving previous build number from snapshots Uploading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/org/cytoscape/psi-mi-impl/1.0-SNAPSHOT/psi-mi-impl-1.0-20101116.012037-86-sources.jar 130K uploaded (psi-mi-impl-1.0-20101116.012037-86-sources.jar) [INFO] [bundle:deploy] [INFO] Remote OBR update disabled (enable with -DremoteOBR) [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/psi-mi-impl-1.0-SNAPSHOT.jar> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 PSI-MI impl/modules/org.cytoscape$psi-mi-impl/builds/2010-11-15_20-19-40/archive/org.cytoscape/psi-mi-impl/1.0-20101116.012037-86/psi-mi-impl-1.0-SNAPSHOT.jar [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/psi-mi-impl-1.0-SNAPSHOT-javadoc.jar> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 PSI-MI impl/modules/org.cytoscape$psi-mi-impl/builds/2010-11-15_20-19-40/archive/org.cytoscape/psi-mi-impl/1.0-20101116.012037-86/psi-mi-impl-1.0-SNAPSHOT-javadoc.jar [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/psi-mi-impl-1.0-SNAPSHOT-sources.jar> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 PSI-MI impl/modules/org.cytoscape$psi-mi-impl/builds/2010-11-15_20-19-40/archive/org.cytoscape/psi-mi-impl/1.0-20101116.012037-86/psi-mi-impl-1.0-SNAPSHOT-sources.jar [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESSFUL [INFO] ------------------------------------------------------------------------ [INFO] Total time: 56 seconds [INFO] Finished at: Mon Nov 15 20:20:38 EST 2010 [INFO] Final Memory: 73M/721M [INFO] ------------------------------------------------------------------------ channel stopped [trunk] $ /R1/tools/maven/apache-maven-2.1.0/bin/mvn org.codehaus.sonar:sonar-maven-plugin:1.8:sonar -Dsonar.jdbc.driver=com.mysql.jdbc.Driver -Dsonar.jdbc.username=sonar -Dsonar.jdbc.password=deploysonar -Dsonar.jdbc.url=jdbc:mysql://localhost:3306/sonar -Dsonar.host.url=http://localhost:8021/sonar/ -Dsonar.skipInstall=true [INFO] Scanning for projects... WAGON_VERSION: 1.0-beta-2 [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.psi-mi-impl [org.cytoscape.psi_mi] [INFO] task-segment: [org.codehaus.sonar:sonar-maven-plugin:1.8:sonar] (aggregator-style) [INFO] ------------------------------------------------------------------------ [INFO] [sonar:sonar] [INFO] Sonar host: http://localhost:8021/sonar [INFO] Sonar version: 2.2 [INFO] [sonar-core:internal] [INFO] Database dialect class org.sonar.api.database.dialect.MySql [INFO] ------------- Analyzing org.cytoscape.psi-mi-impl [org.cytoscape.psi_mi] [INFO] Selected quality profile : Cytoscape, language=java [INFO] Configure maven plugins... [INFO] Sensor JavaSourceImporter... [INFO] Sensor JavaSourceImporter done: 496 ms [INFO] Sensor AsynchronousMeasuresSensor... [INFO] Sensor AsynchronousMeasuresSensor done: 27 ms [INFO] Sensor SquidSensor... [INFO] Java AST scan... [INFO] Java AST scan done: 646 ms [INFO] Java bytecode scan... [WARN] Class '[Lorg/cytoscape/psi_mi/internal/plugin/SchemaVersion;' is not accessible through the ClassLoader. [INFO] Java bytecode scan done: 147 ms [INFO] Squid extraction... [INFO] Package design analysis... [INFO] Package design analysis done: 29 ms [INFO] Squid extraction done: 561 ms [INFO] Sensor SquidSensor done: 1433 ms [INFO] Sensor ProfileSensor... [INFO] Sensor ProfileSensor done: 25 ms [INFO] Sensor ProjectLinksSensor... [INFO] Sensor ProjectLinksSensor done: 5 ms [INFO] Sensor VersionEventsSensor... [INFO] Sensor VersionEventsSensor done: 36 ms [INFO] Sensor Maven dependencies... [INFO] Sensor Maven dependencies done: 207 ms [INFO] Execute maven plugin findbugs-maven-plugin... [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.psi-mi-impl [org.cytoscape.psi_mi] [INFO] task-segment: [org.codehaus.mojo:findbugs-maven-plugin:2.3.1:findbugs] [INFO] ------------------------------------------------------------------------ [INFO] Preparing findbugs:findbugs [INFO] ------------------------------------------------------------------------ [ERROR] BUILD ERROR [INFO] ------------------------------------------------------------------------ [INFO] Can not execute Sonar Embedded error: Unable to execute maven plugin The plugin 'org.codehaus.mojo:cobertura-maven-plugin' does not exist or no valid version could be found [INFO] ------------------------------------------------------------------------ [INFO] For more information, run Maven with the -e switch [INFO] ------------------------------------------------------------------------ [INFO] Total time: 9 seconds [INFO] Finished at: Mon Nov 15 20:20:49 EST 2010 [INFO] Final Memory: 53M/601M [INFO] ------------------------------------------------------------------------ -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/cytoscape-cvs?hl=en.
