See 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/125/>

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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/data_mapper//class-use/Mapper.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/data_mapper//class-use/SchemaMapper.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/data_mapper//class-use/MapInteractionsToPsiOne.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/util//class-use/ContentReader.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/util//class-use/AttributeUtil.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/util//class-use/DataServiceException.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/plugin//class-use/PsiMiNetworkViewTaskFactory.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/plugin//class-use/PsiMiWriter.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/plugin//class-use/PsiMiCyFileFilter.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/plugin//class-use/SchemaVersion.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/plugin//class-use/PsiMiNetworkWriterFactory.html...>
Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//class-use/LabelType.html...>
Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
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Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/InteractionElementType.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/InteractionElementType.ExperimentList.html...>
Generating 
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Generating 
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Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/InteractionElementType.InferredInteractionList.InferredInteraction.Participant.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/InteractionElementType.ParameterList.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/InteractionElementType.ParameterList.Parameter.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/InteractionElementType.ParticipantList.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/EntrySet.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/EntrySet.Entry.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/EntrySet.Entry.AvailabilityList.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/EntrySet.Entry.ExperimentList.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/EntrySet.Entry.InteractionList.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/EntrySet.Entry.InteractionList.Interaction.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/EntrySet.Entry.InteractorList.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/EntrySet.Entry.Source.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/ExperimentRefListType.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/AvailabilityType.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/IntervalType.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/BaseLocationType.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/CvType.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/InteractorElementType.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/InteractorElementType.Organism.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/FeatureElementType.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/FeatureElementType.FeatureRangeList.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/LabelType.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/ExperimentType.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/ExperimentType.HostOrganismList.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/ExperimentType.HostOrganismList.HostOrganism.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/ParameterType.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/FullNameType.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/ConfidenceType.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/ObjectFactory.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/BibrefType.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/PositionType.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/DbReferenceType.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/XrefType.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/OpenCvType.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/NamesType.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/NamesType.Alias.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/BioSourceType.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/AttributeListType.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//class-use/AttributeListType.Attribute.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/cyto_mapper//package-use.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/data_mapper//package-use.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/model//package-use.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/model/vocab//package-use.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/plugin//package-use.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi1//package-use.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/schema/mi25//package-use.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/org/cytoscape/psi_mi/internal/util//package-use.html...>
Building index for all the packages and classes...
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/overview-tree.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/index-all.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/deprecated-list.html...>
Building index for all classes...
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/allclasses-frame.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/allclasses-noframe.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/index.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/overview-summary.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/help-doc.html...>
Generating 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/apidocs/stylesheet.css...>
[INFO] Building jar: 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/psi-mi-impl-1.0-SNAPSHOT-javadoc.jar>
[INFO] Preparing source:jar
[WARNING] Removing: jar from forked lifecycle, to prevent recursive invocation.
Downloading: 
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in 
repository cytoscape_snapshots 
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
Downloading: 
http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in 
repository cytoscape_biopax_snapshot 
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/)
Downloading: 
http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi-snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in 
repository spring-osgi-snapshots 
(http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi-snapshots/)
Downloading: 
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in 
repository cytoscape_snapshots 
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
Downloading: 
http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in 
repository cytoscape_biopax_snapshot 
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/)
[HUDSON] Archiving 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/pom.xml>
 to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 PSI-MI 
impl/modules/org.cytoscape$psi-mi-impl/builds/2010-11-24_15-00-53/archive/org.cytoscape/psi-mi-impl/1.0-SNAPSHOT/pom.xml
[HUDSON] Archiving 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/psi-mi-impl-1.0-SNAPSHOT.jar>
 to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 PSI-MI 
impl/modules/org.cytoscape$psi-mi-impl/builds/2010-11-24_15-00-53/archive/org.cytoscape/psi-mi-impl/1.0-SNAPSHOT/psi-mi-impl-1.0-SNAPSHOT.jar
[HUDSON] Archiving 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/psi-mi-impl-1.0-SNAPSHOT-javadoc.jar>
 to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 PSI-MI 
impl/modules/org.cytoscape$psi-mi-impl/builds/2010-11-24_15-00-53/archive/org.cytoscape/psi-mi-impl/1.0-SNAPSHOT/psi-mi-impl-1.0-SNAPSHOT-javadoc.jar
[INFO] [jaxb2:xjc {execution: mi1}]
[INFO] No changes detected in schema or binding files, skipping source 
generation.
Downloading: 
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in 
repository cytoscape_snapshots 
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
Downloading: 
http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in 
repository cytoscape_biopax_snapshot 
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/)
Downloading: 
http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi-snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in 
repository spring-osgi-snapshots 
(http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi-snapshots/)
Downloading: 
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in 
repository cytoscape_snapshots 
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
Downloading: 
http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in 
repository cytoscape_biopax_snapshot 
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/)
[INFO] [jaxb2:xjc {execution: mi25}]
[INFO] No changes detected in schema or binding files, skipping source 
generation.
[INFO] [source:jar {execution: attach-sources}]
[INFO] Building jar: 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/psi-mi-impl-1.0-SNAPSHOT-sources.jar>
[INFO] [install:install]
[INFO] Installing 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/psi-mi-impl-1.0-SNAPSHOT.jar>
 to 
/home/bturner/.m2/repository/org/cytoscape/psi-mi-impl/1.0-SNAPSHOT/psi-mi-impl-1.0-SNAPSHOT.jar
[INFO] Installing 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/psi-mi-impl-1.0-SNAPSHOT-javadoc.jar>
 to 
/home/bturner/.m2/repository/org/cytoscape/psi-mi-impl/1.0-SNAPSHOT/psi-mi-impl-1.0-SNAPSHOT-javadoc.jar
[INFO] Installing 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/psi-mi-impl-1.0-SNAPSHOT-sources.jar>
 to 
/home/bturner/.m2/repository/org/cytoscape/psi-mi-impl/1.0-SNAPSHOT/psi-mi-impl-1.0-SNAPSHOT-sources.jar
[INFO] [bundle:install]
[INFO] Parsing file:/home/bturner/.m2/repository/repository.xml
[Fatal Error] repository.xml:3:1: Premature end of file.
org.xml.sax.SAXParseException: Premature end of file.
        at 
com.sun.org.apache.xerces.internal.parsers.DOMParser.parse(DOMParser.java:249)
        at 
com.sun.org.apache.xerces.internal.jaxp.DocumentBuilderImpl.parse(DocumentBuilderImpl.java:284)
        at javax.xml.parsers.DocumentBuilder.parse(DocumentBuilder.java:208)
        at org.apache.felix.obrplugin.ObrUpdate.parseFile(ObrUpdate.java:347)
        at 
org.apache.felix.obrplugin.ObrUpdate.parseRepositoryXml(ObrUpdate.java:324)
        at org.apache.felix.obrplugin.ObrInstall.execute(ObrInstall.java:140)
        at 
org.apache.maven.plugin.DefaultPluginManager.executeMojo(DefaultPluginManager.java:483)
        at 
hudson.maven.agent.PluginManagerInterceptor.executeMojo(PluginManagerInterceptor.java:182)
        at 
org.apache.maven.lifecycle.DefaultLifecycleExecutor.executeGoals(DefaultLifecycleExecutor.java:678)
        at 
org.apache.maven.lifecycle.DefaultLifecycleExecutor.executeGoalWithLifecycle(DefaultLifecycleExecutor.java:540)
        at 
org.apache.maven.lifecycle.DefaultLifecycleExecutor.executeGoal(DefaultLifecycleExecutor.java:519)
        at 
org.apache.maven.lifecycle.DefaultLifecycleExecutor.executeGoalAndHandleFailures(DefaultLifecycleExecutor.java:371)
        at 
org.apache.maven.lifecycle.DefaultLifecycleExecutor.executeTaskSegments(DefaultLifecycleExecutor.java:332)
        at 
org.apache.maven.lifecycle.DefaultLifecycleExecutor.execute(DefaultLifecycleExecutor.java:181)
        at 
org.apache.maven.lifecycle.LifecycleExecutorInterceptor.execute(LifecycleExecutorInterceptor.java:65)
        at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:356)
        at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:137)
        at org.apache.maven.cli.MavenCli.main(MavenCli.java:356)
        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
        at 
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
        at 
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
        at java.lang.reflect.Method.invoke(Method.java:597)
        at org.codehaus.classworlds.Launcher.launchEnhanced(Launcher.java:315)
        at org.codehaus.classworlds.Launcher.launch(Launcher.java:255)
        at hudson.maven.agent.Main.launch(Main.java:165)
        at hudson.maven.MavenBuilder.call(MavenBuilder.java:165)
        at 
hudson.maven.MavenModuleSetBuild$Builder.call(MavenModuleSetBuild.java:750)
        at 
hudson.maven.MavenModuleSetBuild$Builder.call(MavenModuleSetBuild.java:694)
        at hudson.remoting.UserRequest.perform(UserRequest.java:114)
        at hudson.remoting.UserRequest.perform(UserRequest.java:48)
        at hudson.remoting.Request$2.run(Request.java:270)
        at 
java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:441)
        at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303)
        at java.util.concurrent.FutureTask.run(FutureTask.java:138)
        at 
java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886)
        at 
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908)
        at java.lang.Thread.run(Thread.java:619)
[INFO] Writing OBR metadata
[INFO] [deploy:deploy]
[INFO] Retrieving previous build number from snapshots
[INFO] repository metadata for: 'snapshot 
org.cytoscape:psi-mi-impl:1.0-SNAPSHOT' could not be found on repository: 
snapshots, so will be created
Uploading: 
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/org/cytoscape/psi-mi-impl/1.0-SNAPSHOT/psi-mi-impl-1.0-20101124.200209-1.jar
[HUDSON] Archiving 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/psi-mi-impl-1.0-SNAPSHOT.jar>
 to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 PSI-MI 
impl/modules/org.cytoscape$psi-mi-impl/builds/2010-11-24_15-00-53/archive/org.cytoscape/psi-mi-impl/1.0-20101124.200209-1/psi-mi-impl-1.0-SNAPSHOT.jar
[HUDSON] Archiving 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/psi-mi-impl-1.0-SNAPSHOT-javadoc.jar>
 to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 PSI-MI 
impl/modules/org.cytoscape$psi-mi-impl/builds/2010-11-24_15-00-53/archive/org.cytoscape/psi-mi-impl/1.0-20101124.200209-1/psi-mi-impl-1.0-SNAPSHOT-javadoc.jar
[HUDSON] Archiving 
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/org.cytoscape$psi-mi-impl/ws/target/psi-mi-impl-1.0-SNAPSHOT-sources.jar>
 to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 PSI-MI 
impl/modules/org.cytoscape$psi-mi-impl/builds/2010-11-24_15-00-53/archive/org.cytoscape/psi-mi-impl/1.0-20101124.200209-1/psi-mi-impl-1.0-SNAPSHOT-sources.jar
[INFO] ------------------------------------------------------------------------
[ERROR] BUILD ERROR
[INFO] ------------------------------------------------------------------------
[INFO] Error deploying artifact: Failed to transfer file: 
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/org/cytoscape/psi-mi-impl/1.0-SNAPSHOT/psi-mi-impl-1.0-20101124.200209-1.jar.
 Return code is: 500

[INFO] ------------------------------------------------------------------------
[INFO] For more information, run Maven with the -e switch
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 1 minute 13 seconds
[INFO] Finished at: Wed Nov 24 15:02:09 EST 2010
[INFO] Final Memory: 74M/727M
[INFO] ------------------------------------------------------------------------

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