See <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/1202/>
------------------------------------------
[...truncated 364 lines...]
at hudson.remoting.UserRequest.perform(UserRequest.java:114)
at hudson.remoting.UserRequest.perform(UserRequest.java:48)
at hudson.remoting.Request$2.run(Request.java:270)
at
java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:441)
at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303)
at java.util.concurrent.FutureTask.run(FutureTask.java:138)
at
java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886)
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908)
at java.lang.Thread.run(Thread.java:619)
[INFO] Writing OBR metadata
[INFO] [deploy:deploy]
[INFO] Retrieving previous build number from snapshots
[INFO] repository metadata for: 'snapshot
org.cytoscape:layout-cytoscape-impl:1.0-SNAPSHOT' could not be found on
repository: snapshots, so will be created
Uploading:
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/org/cytoscape/layout-cytoscape-impl/1.0-SNAPSHOT/layout-cytoscape-impl-1.0-20101125.011246-1.jar
[HUDSON] Archiving
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/ws/trunk/pom.xml>
to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Layout
impl/modules/org.cytoscape$layout-cytoscape-impl/builds/2010-11-24_20-12-10/archive/org.cytoscape/layout-cytoscape-impl/1.0-SNAPSHOT/pom.xml
[HUDSON] Archiving
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/ws/trunk/target/layout-cytoscape-impl-1.0-SNAPSHOT.jar>
to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Layout
impl/modules/org.cytoscape$layout-cytoscape-impl/builds/2010-11-24_20-12-10/archive/org.cytoscape/layout-cytoscape-impl/1.0-20101125.011246-1/layout-cytoscape-impl-1.0-SNAPSHOT.jar
[HUDSON] Archiving
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/ws/trunk/target/layout-cytoscape-impl-1.0-SNAPSHOT-javadoc.jar>
to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Layout
impl/modules/org.cytoscape$layout-cytoscape-impl/builds/2010-11-24_20-12-10/archive/org.cytoscape/layout-cytoscape-impl/1.0-20101125.011246-1/layout-cytoscape-impl-1.0-SNAPSHOT-javadoc.jar
[HUDSON] Archiving
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/ws/trunk/target/layout-cytoscape-impl-1.0-SNAPSHOT-sources.jar>
to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Layout
impl/modules/org.cytoscape$layout-cytoscape-impl/builds/2010-11-24_20-12-10/archive/org.cytoscape/layout-cytoscape-impl/1.0-20101125.011246-1/layout-cytoscape-impl-1.0-SNAPSHOT-sources.jar
[INFO] ------------------------------------------------------------------------
[ERROR] BUILD ERROR
[INFO] ------------------------------------------------------------------------
[INFO] Error deploying artifact: Failed to transfer file:
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/org/cytoscape/layout-cytoscape-impl/1.0-SNAPSHOT/layout-cytoscape-impl-1.0-20101125.011246-1.jar.
Return code is: 500
[INFO] ------------------------------------------------------------------------
[INFO] For more information, run Maven with the -e switch
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 35 seconds
[INFO] Finished at: Wed Nov 24 20:12:47 EST 2010
[INFO] Final Memory: 64M/726M
[INFO] ------------------------------------------------------------------------
Waiting for Hudson to finish collecting data
Sending e-mails to: [email protected]
channel stopped
[trunk] $ /R1/tools/maven/apache-maven-2.1.0/bin/mvn
org.codehaus.sonar:sonar-maven-plugin:1.8:sonar
-Dsonar.jdbc.driver=com.mysql.jdbc.Driver -Dsonar.jdbc.username=sonar
-Dsonar.jdbc.password=deploysonar
-Dsonar.jdbc.url=jdbc:mysql://localhost:3306/sonar
-Dsonar.host.url=http://localhost:8021/sonar/ -Dsonar.skipInstall=true
[INFO] Scanning for projects...
WAGON_VERSION: 1.0-beta-2
[INFO] ------------------------------------------------------------------------
[INFO] Building org.cytoscape.layout-cytoscape-impl [csplugins.layout]
[INFO] task-segment: [org.codehaus.sonar:sonar-maven-plugin:1.8:sonar]
(aggregator-style)
[INFO] ------------------------------------------------------------------------
[INFO] [sonar:sonar]
[INFO] Sonar host: http://localhost:8021/sonar
[INFO] Sonar version: 2.4
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/model-api/1.0-SNAPSHOT/model-api-1.0-SNAPSHOT.pom
[INFO] Unable to find resource 'org.cytoscape:model-api:pom:1.0-SNAPSHOT' in
repository cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/model-api/1.0-SNAPSHOT/model-api-1.0-SNAPSHOT.pom
[INFO] Unable to find resource 'org.cytoscape:model-api:pom:1.0-SNAPSHOT' in
repository cytoscape_biopax_snapshot
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/viewmodel-api/1.0-SNAPSHOT/viewmodel-api-1.0-SNAPSHOT.pom
[INFO] Unable to find resource 'org.cytoscape:viewmodel-api:pom:1.0-SNAPSHOT'
in repository cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/viewmodel-api/1.0-SNAPSHOT/viewmodel-api-1.0-SNAPSHOT.pom
[INFO] Unable to find resource 'org.cytoscape:viewmodel-api:pom:1.0-SNAPSHOT'
in repository cytoscape_biopax_snapshot
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/presentation-api/1.0-SNAPSHOT/presentation-api-1.0-SNAPSHOT.pom
[INFO] Unable to find resource
'org.cytoscape:presentation-api:pom:1.0-SNAPSHOT' in repository
cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/presentation-api/1.0-SNAPSHOT/presentation-api-1.0-SNAPSHOT.pom
[INFO] Unable to find resource
'org.cytoscape:presentation-api:pom:1.0-SNAPSHOT' in repository
cytoscape_biopax_snapshot
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/model-api/1.0-SNAPSHOT/model-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:model-api:jar:1.0-SNAPSHOT' in
repository cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/model-api/1.0-SNAPSHOT/model-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:model-api:jar:1.0-SNAPSHOT' in
repository cytoscape_biopax_snapshot
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/viewmodel-api/1.0-SNAPSHOT/viewmodel-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:viewmodel-api:jar:1.0-SNAPSHOT'
in repository cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/viewmodel-api/1.0-SNAPSHOT/viewmodel-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:viewmodel-api:jar:1.0-SNAPSHOT'
in repository cytoscape_biopax_snapshot
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/presentation-api/1.0-SNAPSHOT/presentation-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource
'org.cytoscape:presentation-api:jar:1.0-SNAPSHOT' in repository
cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/presentation-api/1.0-SNAPSHOT/presentation-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource
'org.cytoscape:presentation-api:jar:1.0-SNAPSHOT' in repository
cytoscape_biopax_snapshot
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/model-api/1.0-SNAPSHOT/model-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:model-api:jar:1.0-SNAPSHOT' in
repository cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/model-api/1.0-SNAPSHOT/model-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:model-api:jar:1.0-SNAPSHOT' in
repository cytoscape_biopax_snapshot
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/viewmodel-api/1.0-SNAPSHOT/viewmodel-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:viewmodel-api:jar:1.0-SNAPSHOT'
in repository cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/viewmodel-api/1.0-SNAPSHOT/viewmodel-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:viewmodel-api:jar:1.0-SNAPSHOT'
in repository cytoscape_biopax_snapshot
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/presentation-api/1.0-SNAPSHOT/presentation-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource
'org.cytoscape:presentation-api:jar:1.0-SNAPSHOT' in repository
cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/presentation-api/1.0-SNAPSHOT/presentation-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource
'org.cytoscape:presentation-api:jar:1.0-SNAPSHOT' in repository
cytoscape_biopax_snapshot
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/)
[INFO] [sonar-core:internal]
[INFO] Database dialect class org.sonar.jpa.dialect.MySql
[INFO] ------------- Analyzing org.cytoscape.layout-cytoscape-impl
[csplugins.layout]
[INFO] Selected quality profile : [name=Cytoscape,language=java]
[INFO] Configure maven plugins...
[INFO] Sensor JavaSourceImporter...
[INFO] Sensor JavaSourceImporter done: 591 ms
[INFO] Sensor AsynchronousMeasuresSensor...
[INFO] Sensor AsynchronousMeasuresSensor done: 23 ms
[INFO] Sensor SquidSensor...
[INFO] Java AST scan...
[INFO] Java AST scan done: 1113 ms
[INFO] Java bytecode scan...
[INFO] Java bytecode scan done: 279 ms
[INFO] Squid extraction...
[INFO] Package design analysis...
[INFO] Package design analysis done: 32 ms
[INFO] Squid extraction done: 726 ms
[INFO] Sensor SquidSensor done: 2243 ms
[INFO] Sensor FindbugsSensor...
[INFO] Execute Findbugs 1.3.9...
[INFO] Findbugs output report:
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/ws/trunk/target/sonar/findbugs-result.xml>
[INFO] Execute Findbugs 1.3.9 done: 13027 ms
[INFO] Sensor FindbugsSensor done: 13532 ms
[INFO] Execute maven plugin cobertura-maven-plugin...
[INFO] ------------------------------------------------------------------------
[INFO] Building org.cytoscape.layout-cytoscape-impl [csplugins.layout]
[INFO] task-segment: [org.codehaus.mojo:cobertura-maven-plugin::cobertura]
[INFO] ------------------------------------------------------------------------
[INFO] Preparing cobertura:cobertura
[INFO] [resources:resources]
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 2 resources
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/model-api/1.0-SNAPSHOT/model-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:model-api:jar:1.0-SNAPSHOT' in
repository cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/model-api/1.0-SNAPSHOT/model-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:model-api:jar:1.0-SNAPSHOT' in
repository cytoscape_biopax_snapshot
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/viewmodel-api/1.0-SNAPSHOT/viewmodel-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:viewmodel-api:jar:1.0-SNAPSHOT'
in repository cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/viewmodel-api/1.0-SNAPSHOT/viewmodel-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:viewmodel-api:jar:1.0-SNAPSHOT'
in repository cytoscape_biopax_snapshot
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/presentation-api/1.0-SNAPSHOT/presentation-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource
'org.cytoscape:presentation-api:jar:1.0-SNAPSHOT' in repository
cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/presentation-api/1.0-SNAPSHOT/presentation-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource
'org.cytoscape:presentation-api:jar:1.0-SNAPSHOT' in repository
cytoscape_biopax_snapshot
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/model-api/1.0-SNAPSHOT/model-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:model-api:jar:1.0-SNAPSHOT' in
repository cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/model-api/1.0-SNAPSHOT/model-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:model-api:jar:1.0-SNAPSHOT' in
repository cytoscape_biopax_snapshot
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/viewmodel-api/1.0-SNAPSHOT/viewmodel-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:viewmodel-api:jar:1.0-SNAPSHOT'
in repository cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/viewmodel-api/1.0-SNAPSHOT/viewmodel-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:viewmodel-api:jar:1.0-SNAPSHOT'
in repository cytoscape_biopax_snapshot
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/presentation-api/1.0-SNAPSHOT/presentation-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource
'org.cytoscape:presentation-api:jar:1.0-SNAPSHOT' in repository
cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/presentation-api/1.0-SNAPSHOT/presentation-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource
'org.cytoscape:presentation-api:jar:1.0-SNAPSHOT' in repository
cytoscape_biopax_snapshot
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/)
[INFO] [pax:compile]
[INFO] Nothing to compile - all classes are up to date
[INFO] [cobertura:instrument]
[INFO] Cobertura 1.9.4.1 - GNU GPL License (NO WARRANTY) - See COPYRIGHT file
Instrumenting 34 files to
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/ws/trunk/target/generated-classes/cobertura>
[cobertura] WARN [main] net.sourceforge.cobertura.instrument.ClassInstrumenter
- No line number information found for class
csplugins.layout.algorithms.graphPartition.AttributeCircleLayoutTask$1.
Perhaps you need to compile with debug=true?
Cobertura: Saved information on 34 classes.
Instrument time: 1382ms
[INFO] Instrumentation was successful.
[INFO] [resources:testResources]
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/ws/trunk/src/test/resources>
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/model-api/1.0-SNAPSHOT/model-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:model-api:jar:1.0-SNAPSHOT' in
repository cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/model-api/1.0-SNAPSHOT/model-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:model-api:jar:1.0-SNAPSHOT' in
repository cytoscape_biopax_snapshot
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/viewmodel-api/1.0-SNAPSHOT/viewmodel-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:viewmodel-api:jar:1.0-SNAPSHOT'
in repository cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/viewmodel-api/1.0-SNAPSHOT/viewmodel-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:viewmodel-api:jar:1.0-SNAPSHOT'
in repository cytoscape_biopax_snapshot
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/presentation-api/1.0-SNAPSHOT/presentation-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource
'org.cytoscape:presentation-api:jar:1.0-SNAPSHOT' in repository
cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/presentation-api/1.0-SNAPSHOT/presentation-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource
'org.cytoscape:presentation-api:jar:1.0-SNAPSHOT' in repository
cytoscape_biopax_snapshot
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/model-api/1.0-SNAPSHOT/model-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:model-api:jar:1.0-SNAPSHOT' in
repository cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/model-api/1.0-SNAPSHOT/model-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:model-api:jar:1.0-SNAPSHOT' in
repository cytoscape_biopax_snapshot
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/viewmodel-api/1.0-SNAPSHOT/viewmodel-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:viewmodel-api:jar:1.0-SNAPSHOT'
in repository cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/viewmodel-api/1.0-SNAPSHOT/viewmodel-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:viewmodel-api:jar:1.0-SNAPSHOT'
in repository cytoscape_biopax_snapshot
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/presentation-api/1.0-SNAPSHOT/presentation-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource
'org.cytoscape:presentation-api:jar:1.0-SNAPSHOT' in repository
cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/presentation-api/1.0-SNAPSHOT/presentation-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource
'org.cytoscape:presentation-api:jar:1.0-SNAPSHOT' in repository
cytoscape_biopax_snapshot
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/)
[INFO] [pax:testCompile]
[INFO] No sources to compile
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/model-api/1.0-SNAPSHOT/model-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:model-api:jar:1.0-SNAPSHOT' in
repository cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/model-api/1.0-SNAPSHOT/model-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:model-api:jar:1.0-SNAPSHOT' in
repository cytoscape_biopax_snapshot
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/viewmodel-api/1.0-SNAPSHOT/viewmodel-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:viewmodel-api:jar:1.0-SNAPSHOT'
in repository cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/viewmodel-api/1.0-SNAPSHOT/viewmodel-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:viewmodel-api:jar:1.0-SNAPSHOT'
in repository cytoscape_biopax_snapshot
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/presentation-api/1.0-SNAPSHOT/presentation-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource
'org.cytoscape:presentation-api:jar:1.0-SNAPSHOT' in repository
cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/presentation-api/1.0-SNAPSHOT/presentation-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource
'org.cytoscape:presentation-api:jar:1.0-SNAPSHOT' in repository
cytoscape_biopax_snapshot
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/model-api/1.0-SNAPSHOT/model-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:model-api:jar:1.0-SNAPSHOT' in
repository cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/model-api/1.0-SNAPSHOT/model-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:model-api:jar:1.0-SNAPSHOT' in
repository cytoscape_biopax_snapshot
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/viewmodel-api/1.0-SNAPSHOT/viewmodel-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:viewmodel-api:jar:1.0-SNAPSHOT'
in repository cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/viewmodel-api/1.0-SNAPSHOT/viewmodel-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource 'org.cytoscape:viewmodel-api:jar:1.0-SNAPSHOT'
in repository cytoscape_biopax_snapshot
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/presentation-api/1.0-SNAPSHOT/presentation-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource
'org.cytoscape:presentation-api:jar:1.0-SNAPSHOT' in repository
cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/presentation-api/1.0-SNAPSHOT/presentation-api-1.0-SNAPSHOT.jar
[INFO] Unable to find resource
'org.cytoscape:presentation-api:jar:1.0-SNAPSHOT' in repository
cytoscape_biopax_snapshot
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/)
[INFO] [surefire:test]
[INFO] No tests to run.
[INFO] [cobertura:cobertura]
[INFO] Cobertura 1.9.4.1 - GNU GPL License (NO WARRANTY) - See COPYRIGHT file
Cobertura: Loaded information on 34 classes.
Report time: 2417ms
[INFO] Cobertura Report generation was successful.
[INFO] Execute maven plugin cobertura-maven-plugin done: 8587 ms
[INFO] Sensor CoberturaSensor...
[INFO] parsing
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/ws/trunk/target/site/cobertura/coverage.xml>
[INFO] Sensor CoberturaSensor done: 320 ms
[INFO] Sensor CpdSensor...
[INFO] Sensor CpdSensor done: 290 ms
[INFO] Sensor CheckstyleSensor...
[INFO] Execute Checkstyle 5.1...
[INFO] Checkstyle configuration:
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/ws/trunk/target/sonar/checkstyle.xml>
[INFO] Execute Checkstyle 5.1 done: 1883 ms
[INFO] Sensor CheckstyleSensor done: 1909 ms
[INFO] Sensor PmdSensor...
[INFO] Execute PMD 4.2.5...
[INFO] Java version: 1.6
[INFO] PMD configuration:
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/ws/trunk/target/sonar/pmd.xml>
[INFO] PMD output report:
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/ws/trunk/target/sonar/pmd-result.xml>
[INFO] Execute PMD 4.2.5 done: 5340 ms
[INFO] Sensor PmdSensor done: 5454 ms
[INFO] Sensor ProfileSensor...
[INFO] Sensor ProfileSensor done: 25 ms
[INFO] Sensor ProjectLinksSensor...
[INFO] Sensor ProjectLinksSensor done: 5 ms
[INFO] Sensor VersionEventsSensor...
[INFO] Sensor VersionEventsSensor done: 37 ms
[INFO] Sensor Maven dependencies...
[INFO] Sensor Maven dependencies done: 91 ms
[INFO] Sensor SurefireSensor...
[INFO] parsing
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Layout%20impl/ws/trunk/target/surefire-reports>
[INFO] Sensor SurefireSensor done: 25 ms
[INFO] Execute decorators...
[INFO] ANALYSIS SUCCESSFUL, you can browse http://localhost:8021/sonar
[INFO] Database optimization...
[INFO] Deleting files data before Wed Nov 24 08:13:46 EST 2010
[INFO] Deleting unprocessed data before Wed Nov 24 08:13:46 EST 2010
[INFO] Database optimization done: 897 ms
[INFO] ------------------------------------------------------------------------
[INFO] BUILD SUCCESSFUL
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 48 seconds
[INFO] Finished at: Wed Nov 24 20:13:46 EST 2010
[INFO] Final Memory: 72M/785M
[INFO] ------------------------------------------------------------------------
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