See <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Property%20API/67/>
------------------------------------------ [...truncated 546 lines...] [INFO] Building org.cytoscape.property [INFO] task-segment: [org.codehaus.sonar:sonar-maven-plugin:1.8:sonar] (aggregator-style) [INFO] ------------------------------------------------------------------------ [INFO] [sonar:sonar] [INFO] Sonar host: http://localhost:8021/sonar [INFO] Sonar version: 2.4 [INFO] [sonar-core:internal] [INFO] Database dialect class org.sonar.jpa.dialect.MySql [INFO] ------------- Analyzing org.cytoscape.property [INFO] Selected quality profile : [name=Cytoscape,language=java] [INFO] Configure maven plugins... [INFO] Sensor JavaSourceImporter... [INFO] Sensor JavaSourceImporter done: 371 ms [INFO] Sensor AsynchronousMeasuresSensor... [INFO] Sensor AsynchronousMeasuresSensor done: 78 ms [INFO] Sensor SquidSensor... [INFO] Java AST scan... [INFO] Java AST scan done: 210 ms [INFO] Java bytecode scan... [INFO] Java bytecode scan done: 44 ms [INFO] Squid extraction... [INFO] Package design analysis... [INFO] Package design analysis done: 9 ms [INFO] Squid extraction done: 195 ms [INFO] Sensor SquidSensor done: 493 ms [INFO] Sensor FindbugsSensor... [INFO] Execute Findbugs 1.3.9... [INFO] Findbugs output report: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Property%20API/ws/trunk/target/sonar/findbugs-result.xml> [INFO] Execute Findbugs 1.3.9 done: 5474 ms [INFO] Sensor FindbugsSensor done: 5605 ms [INFO] Execute maven plugin cobertura-maven-plugin... [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.property [INFO] task-segment: [org.codehaus.mojo:cobertura-maven-plugin::cobertura] [INFO] ------------------------------------------------------------------------ [INFO] Preparing cobertura:cobertura [INFO] [jaxb2:generate {execution: session}] [INFO] Started execution. [INFO] JAXB API is loaded from the [jar:file:/R1/tools/java/jdk1.6.0_20/jre/lib/rt.jar!]. [INFO] Detected JAXB API version [2.1]. [INFO] pluginArtifacts:[org.jvnet.jaxb2.maven2:maven-jaxb2-plugin-raw:jar:0.7.4:runtime, org.codehaus.plexus:plexus-utils:jar:1.1:runtime, org.jfrog.maven.annomojo:maven-plugin-anno:jar:1.3.1:runtime, org.sonatype.plexus:plexus-build-api:jar:0.0.6:runtime, com.sun.xml.bind:jaxb-impl:jar:2.1.13:runtime, javax.xml.bind:jaxb-api:jar:2.1:runtime, javax.xml.stream:stax-api:jar:1.0-2:runtime, javax.activation:activation:jar:1.1:runtime, org.jvnet.jaxb2_commons:jaxb2-basics-jaxb-xjc:jar:2.1.13.MR2:runtime, com.sun.codemodel:codemodel:jar:2.3:runtime, com.sun.xml.dtd-parser:dtd-parser:jar:1.1:runtime, com.sun.istack:istack-commons-tools:jar:2.2.MR1:runtime, org.apache.ant:ant:jar:1.7.0:runtime, org.apache.ant:ant-launcher:jar:1.7.0:runtime, sun.jdk:tools:jar:1.5.0:system, relaxngDatatype:relaxngDatatype:jar:20020414:runtime, com.sun.org.apache.xml.internal:resolver:jar:20050927:runtime, org.kohsuke.rngom:rngom:jar:20100718:runtime, com.sun.xsom:xsom:jar:20100725:runtime] [INFO] schemaLanguage:null [INFO] schemaDirectory:<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Property%20API/ws/trunk/src/main/resources/xsd> [INFO] schemaIncludes:[Ljava.lang.String;@6e95b0a3 [INFO] schemaExcludes:null [INFO] bindingDirectory:<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Property%20API/ws/trunk/src/main/resources/xsd> [INFO] bindingIncludes:[Ljava.lang.String;@257fd60d [INFO] bindingExcludes:null [INFO] disableDefaultExcludes:false [INFO] catalog:null [INFO] catalogResolver:com.sun.org.apache.xml.internal.resolver.tools.CatalogResolver [INFO] generatePackage:org.cytoscape.property.session [INFO] generateDirectory:<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Property%20API/ws/trunk/target/generated-sources/xjc> [INFO] readOnly:false [INFO] extension:false [INFO] strict:true [INFO] writeCode:true [INFO] verbose:true [INFO] debug:false [INFO] args:[] [INFO] forceRegenerate:true [INFO] removeOldOutput:false [INFO] produces:[**/*.*, **/*.java, **/bgm.ser, **/jaxb.properties] [INFO] otherDepends:null [INFO] episodeFile:<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Property%20API/ws/trunk/target/generated-sources/xjc/META-INF/sun-jaxb.episode> [INFO] episode:true [INFO] classpathElements:[<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Property%20API/ws/trunk/target/classes,> /home/bturner/.m2/repository/org/ops4j/pax/logging/pax-logging-api/1.5.2/pax-logging-api-1.5.2.jar] [INFO] plugins:null [INFO] episodes:null [INFO] xjcPlugins:null [INFO] episodes:null [INFO] specVersion:2.1 [INFO] schemaFiles (calculated):[<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Property%20API/ws/trunk/src/main/resources/xsd/cysession.xsd]> [INFO] bindingFiles (calculated):[] [INFO] xjcPluginArtifacts (resolved):[] [INFO] xjcPluginFiles (resolved):[] [INFO] xjcPluginURLs (resolved):[] [INFO] episodeArtifacts (resolved):[] [INFO] episodeFiles (resolved):[] [INFO] The schemaLanguage setting was not defined, assuming 'AUTODETECT'. Cannot find CatalogManager.properties Using java.util.ServiceLoader [INFO] Parsing input schema(s)... [INFO] Compiling input schema(s)... [INFO] Writing output to [<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Property%20API/ws/trunk/target/generated-sources/xjc].> [INFO] XJC writing: org/cytoscape/property/session/Child.java [INFO] XJC writing: org/cytoscape/property/session/Cysession.java [INFO] XJC writing: org/cytoscape/property/session/Cytopanel.java [INFO] XJC writing: org/cytoscape/property/session/Cytopanels.java [INFO] XJC writing: org/cytoscape/property/session/Desktop.java [INFO] XJC writing: org/cytoscape/property/session/DesktopSize.java [INFO] XJC writing: org/cytoscape/property/session/Edge.java [INFO] XJC writing: org/cytoscape/property/session/HiddenEdges.java [INFO] XJC writing: org/cytoscape/property/session/HiddenNodes.java [INFO] XJC writing: org/cytoscape/property/session/Network.java [INFO] XJC writing: org/cytoscape/property/session/NetworkFrame.java [INFO] XJC writing: org/cytoscape/property/session/NetworkFrames.java [INFO] XJC writing: org/cytoscape/property/session/NetworkTree.java [INFO] XJC writing: org/cytoscape/property/session/Node.java [INFO] XJC writing: org/cytoscape/property/session/ObjectFactory.java [INFO] XJC writing: org/cytoscape/property/session/Ontology.java [INFO] XJC writing: org/cytoscape/property/session/OntologyServer.java [INFO] XJC writing: org/cytoscape/property/session/Panel.java [INFO] XJC writing: org/cytoscape/property/session/Panels.java [INFO] XJC writing: org/cytoscape/property/session/Parent.java [INFO] XJC writing: org/cytoscape/property/session/Plugin.java [INFO] XJC writing: org/cytoscape/property/session/Plugins.java [INFO] XJC writing: org/cytoscape/property/session/SelectedEdges.java [INFO] XJC writing: org/cytoscape/property/session/SelectedNodes.java [INFO] XJC writing: org/cytoscape/property/session/Server.java [INFO] XJC writing: org/cytoscape/property/session/SessionState.java [INFO] XJC writing: org/cytoscape/property/session/ViewableNodes.java [INFO] Finished execution. [INFO] [jaxb2:generate {execution: bookmarks}] [INFO] Started execution. [INFO] JAXB API is loaded from the [jar:file:/R1/tools/java/jdk1.6.0_20/jre/lib/rt.jar!]. [INFO] Detected JAXB API version [2.1]. [INFO] pluginArtifacts:[org.jvnet.jaxb2.maven2:maven-jaxb2-plugin-raw:jar:0.7.4:runtime, org.codehaus.plexus:plexus-utils:jar:1.1:runtime, org.jfrog.maven.annomojo:maven-plugin-anno:jar:1.3.1:runtime, org.sonatype.plexus:plexus-build-api:jar:0.0.6:runtime, com.sun.xml.bind:jaxb-impl:jar:2.1.13:runtime, javax.xml.bind:jaxb-api:jar:2.1:runtime, javax.xml.stream:stax-api:jar:1.0-2:runtime, javax.activation:activation:jar:1.1:runtime, org.jvnet.jaxb2_commons:jaxb2-basics-jaxb-xjc:jar:2.1.13.MR2:runtime, com.sun.codemodel:codemodel:jar:2.3:runtime, com.sun.xml.dtd-parser:dtd-parser:jar:1.1:runtime, com.sun.istack:istack-commons-tools:jar:2.2.MR1:runtime, org.apache.ant:ant:jar:1.7.0:runtime, org.apache.ant:ant-launcher:jar:1.7.0:runtime, sun.jdk:tools:jar:1.5.0:system, relaxngDatatype:relaxngDatatype:jar:20020414:runtime, com.sun.org.apache.xml.internal:resolver:jar:20050927:runtime, org.kohsuke.rngom:rngom:jar:20100718:runtime, com.sun.xsom:xsom:jar:20100725:runtime] [INFO] schemaLanguage:null [INFO] schemaDirectory:<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Property%20API/ws/trunk/src/main/resources/xsd> [INFO] schemaIncludes:[Ljava.lang.String;@53533bdf [INFO] schemaExcludes:null [INFO] bindingDirectory:<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Property%20API/ws/trunk/src/main/resources/xsd> [INFO] bindingIncludes:[Ljava.lang.String;@7d7fd835 [INFO] bindingExcludes:null [INFO] disableDefaultExcludes:false [INFO] catalog:null [INFO] catalogResolver:com.sun.org.apache.xml.internal.resolver.tools.CatalogResolver [INFO] generatePackage:org.cytoscape.property.bookmark [INFO] generateDirectory:<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Property%20API/ws/trunk/target/generated-sources/xjc> [INFO] readOnly:false [INFO] extension:false [INFO] strict:true [INFO] writeCode:true [INFO] verbose:true [INFO] debug:false [INFO] args:[] [INFO] forceRegenerate:true [INFO] removeOldOutput:false [INFO] produces:[**/*.*, **/*.java, **/bgm.ser, **/jaxb.properties] [INFO] otherDepends:null [INFO] episodeFile:<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Property%20API/ws/trunk/target/generated-sources/xjc/META-INF/sun-jaxb.episode> [INFO] episode:true [INFO] classpathElements:[<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Property%20API/ws/trunk/target/classes,> /home/bturner/.m2/repository/org/ops4j/pax/logging/pax-logging-api/1.5.2/pax-logging-api-1.5.2.jar] [INFO] plugins:null [INFO] episodes:null [INFO] xjcPlugins:null [INFO] episodes:null [INFO] specVersion:2.1 [INFO] schemaFiles (calculated):[<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Property%20API/ws/trunk/src/main/resources/xsd/bookmarks.xsd,> <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Property%20API/ws/trunk/src/main/resources/xsd/xlinks-2001.xsd]> [INFO] bindingFiles (calculated):[] [INFO] xjcPluginArtifacts (resolved):[] [INFO] xjcPluginFiles (resolved):[] [INFO] xjcPluginURLs (resolved):[] [INFO] episodeArtifacts (resolved):[] [INFO] episodeFiles (resolved):[] [INFO] The schemaLanguage setting was not defined, assuming 'AUTODETECT'. Using java.util.ServiceLoader [INFO] Parsing input schema(s)... [INFO] Compiling input schema(s)... [INFO] Writing output to [<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Property%20API/ws/trunk/target/generated-sources/xjc].> [INFO] XJC writing: org/cytoscape/property/bookmark/Attribute.java [INFO] XJC writing: org/cytoscape/property/bookmark/Bookmarks.java [INFO] XJC writing: org/cytoscape/property/bookmark/Category.java [INFO] XJC writing: org/cytoscape/property/bookmark/DataSource.java [INFO] XJC writing: org/cytoscape/property/bookmark/ObjectFactory.java [INFO] Finished execution. [INFO] [resources:resources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 3 resources [INFO] Copying 0 resource [INFO] Copying 1 resource [INFO] Copying 0 resource [INFO] Copying 1 resource [INFO] [pax:compile] [INFO] Compiling 32 source files to <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Property%20API/ws/trunk/target/classes> [INFO] [cobertura:instrument] [INFO] Cobertura 1.9.4.1 - GNU GPL License (NO WARRANTY) - See COPYRIGHT file Instrumenting 35 files to <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Property%20API/ws/trunk/target/generated-classes/cobertura> Cobertura: Saved information on 35 classes. Instrument time: 1258ms [INFO] Instrumentation was successful. [INFO] [resources:testResources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] skip non existing resourceDirectory <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Property%20API/ws/trunk/src/test/resources> [INFO] [pax:testCompile] [INFO] Nothing to compile - all classes are up to date [INFO] [surefire:test] [INFO] Surefire report directory: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Property%20API/ws/trunk/target/surefire-reports> ------------------------------------------------------- T E S T S ------------------------------------------------------- Running org.cytoscape.property.BasicCyPropertyTest Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.045 sec Results : Tests run: 2, Failures: 0, Errors: 0, Skipped: 0 [INFO] [cobertura:cobertura] [INFO] Cobertura 1.9.4.1 - GNU GPL License (NO WARRANTY) - See COPYRIGHT file Cobertura: Loaded information on 35 classes. Report time: 443ms [INFO] Cobertura Report generation was successful. [INFO] Execute maven plugin cobertura-maven-plugin done: 10033 ms [INFO] Sensor CoberturaSensor... [INFO] parsing <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Property%20API/ws/trunk/target/site/cobertura/coverage.xml> [INFO] Sensor CoberturaSensor done: 144 ms [INFO] Sensor CpdSensor... [INFO] Sensor CpdSensor done: 45 ms [INFO] Sensor CheckstyleSensor... [INFO] Execute Checkstyle 5.1... [INFO] Checkstyle configuration: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Property%20API/ws/trunk/target/sonar/checkstyle.xml> [INFO] Execute Checkstyle 5.1 done: 494 ms [INFO] Sensor CheckstyleSensor done: 496 ms [INFO] Sensor PmdSensor... [INFO] Execute PMD 4.2.5... [INFO] Java version: 1.6 [INFO] PMD configuration: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Property%20API/ws/trunk/target/sonar/pmd.xml> [INFO] PMD output report: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Property%20API/ws/trunk/target/sonar/pmd-result.xml> [INFO] Execute PMD 4.2.5 done: 1695 ms [INFO] Sensor PmdSensor done: 1759 ms [INFO] Sensor ProfileSensor... [INFO] Sensor ProfileSensor done: 24 ms [INFO] Sensor ProjectLinksSensor... [INFO] Sensor ProjectLinksSensor done: 11 ms [INFO] Sensor VersionEventsSensor... [INFO] Sensor VersionEventsSensor done: 47 ms [INFO] Sensor Maven dependencies... [INFO] Sensor Maven dependencies done: 290 ms [INFO] Sensor SurefireSensor... [INFO] parsing <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Property%20API/ws/trunk/target/surefire-reports> [INFO] Sensor SurefireSensor done: 41 ms [INFO] Execute decorators... [INFO] ANALYSIS SUCCESSFUL, you can browse http://localhost:8021/sonar [INFO] Database optimization... [INFO] Deleting files data before Wed Nov 24 08:23:11 EST 2010 [INFO] Deleting unprocessed data before Wed Nov 24 08:23:11 EST 2010 [INFO] Database optimization done: 972 ms [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESSFUL [INFO] ------------------------------------------------------------------------ [INFO] Total time: 33 seconds [INFO] Finished at: Wed Nov 24 20:23:12 EST 2010 [INFO] Final Memory: 78M/713M [INFO] ------------------------------------------------------------------------ -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/cytoscape-cvs?hl=en.
