See <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/122/>
------------------------------------------ Started by upstream project "Cy3 Swing Application API" build number 150 Checking out http://chianti.ucsd.edu/svn/core3/table-browser-impl/trunk A osgi.bnd A src A src/main A src/main/java A src/main/java/org A src/main/java/org/cytoscape A src/main/java/org/cytoscape/browser A src/main/java/org/cytoscape/browser/internal AU src/main/java/org/cytoscape/browser/internal/AttributeListModel.java A src/main/java/org/cytoscape/browser/internal/MultiLineTableCellEditor.java A src/main/java/org/cytoscape/browser/internal/BrowserTableCellRenderer.java A src/main/java/org/cytoscape/browser/internal/MyTableCellEditor.java A src/main/java/org/cytoscape/browser/internal/ValidatedObjectAndEditString.java A src/main/java/org/cytoscape/browser/internal/TableChooser.java A src/main/java/org/cytoscape/browser/internal/BrowserTable.java A src/main/java/org/cytoscape/browser/internal/TableBrowser.java A src/main/java/org/cytoscape/browser/internal/BrowserTableModel.java A src/main/java/org/cytoscape/browser/ui AU src/main/java/org/cytoscape/browser/ui/DeletionDialog.java A src/main/java/org/cytoscape/browser/ui/AttributeBrowserToolBar.java A src/main/resources A src/main/resources/META-INF A src/main/resources/META-INF/spring A src/main/resources/META-INF/spring/bundle-context-osgi.xml A src/main/resources/META-INF/spring/bundle-context.xml A src/main/resources/images AU src/main/resources/images/stock_new.png AU src/main/resources/images/new32.png AU src/main/resources/images/microarraySmall.png AU src/main/resources/images/stock_open.png AU src/main/resources/images/stock_delete.png AU src/main/resources/images/stock_data-linked-table.png AU src/main/resources/images/select_all.png AU src/main/resources/images/delete32.png AU src/main/resources/images/unselect_all.png AU src/main/resources/images/folder.png AU src/main/resources/images/microarray_24.png AU src/main/resources/images/fx.png AU src/main/resources/images/microarray_16.png AU src/main/resources/images/folder32.png AU src/main/resources/images/go_new32.png AU src/main/resources/images/select32.png AU src/main/resources/images/stock_insert-columns.png AU src/main/resources/images/metadata32.png AU src/main/resources/images/stock_select-row.png A pom.xml At revision 23303 no change for http://chianti.ucsd.edu/svn/core3/table-browser-impl/trunk since the previous build No emails were triggered. Parsing POMs [trunk] $ java -cp /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven-agent-1.385.jar:/R1/tools/maven/apache-maven-2.1.0/boot/classworlds-1.1.jar hudson.maven.agent.Main /R1/tools/maven/apache-maven-2.1.0 /R1/resources/webservers/tomcat_2/webapps/hudson/WEB-INF/lib/remoting-1.385.jar /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven-interceptor-1.385.jar 42119 /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven2.1-interceptor-1.2.jar <===[HUDSON REMOTING CAPACITY]===> channel started Executing Maven: -B -f <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/pom.xml> deploy [INFO] Scanning for projects... WAGON_VERSION: 1.0-beta-2 [INFO] ------------------------------------------------------------------------ [INFO] Building Cytoscape Table Browser Implementation [INFO] task-segment: [deploy] [INFO] ------------------------------------------------------------------------ [INFO] [resources:resources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 21 resources [INFO] [pax:compile] [INFO] Compiling 11 source files to <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/target/classes> [INFO] [recovering meta-data] [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/pom.xml> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Table Browser impl/modules/org.cytoscape$table-browser-impl/builds/2011-01-04_21-55-53/archive/org.cytoscape/table-browser-impl/1.0-SNAPSHOT/pom.xml [INFO] ------------------------------------------------------------------------ [ERROR] BUILD FAILURE [INFO] ------------------------------------------------------------------------ [INFO] Compilation failure <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/BrowserTableModel.java>:[321,15] compile(java.lang.String,java.util.Map<java.lang.String,java.lang.Class<?>>) in org.cytoscape.equations.EqnCompiler cannot be applied to (java.lang.String,java.util.Map<java.lang.String,java.lang.Class>) [INFO] ------------------------------------------------------------------------ [INFO] For more information, run Maven with the -e switch [INFO] ------------------------------------------------------------------------ [INFO] Total time: 6 seconds [INFO] Finished at: Tue Jan 04 21:56:02 EST 2011 [INFO] Final Memory: 47M/491M [INFO] ------------------------------------------------------------------------ Sending e-mails to: [email protected] channel stopped [trunk] $ /R1/tools/maven/apache-maven-2.1.0/bin/mvn org.codehaus.sonar:sonar-maven-plugin:1.8:sonar -Dsonar.jdbc.driver=com.mysql.jdbc.Driver -Dsonar.jdbc.username=sonar -Dsonar.jdbc.password=deploysonar -Dsonar.jdbc.url=jdbc:mysql://localhost:3306/sonar -Dsonar.host.url=http://localhost:8021/sonar/ -Dsonar.skipInstall=true [INFO] Scanning for projects... WAGON_VERSION: 1.0-beta-2 [INFO] ------------------------------------------------------------------------ [INFO] Building Cytoscape Table Browser Implementation [INFO] task-segment: [org.codehaus.sonar:sonar-maven-plugin:1.8:sonar] (aggregator-style) [INFO] ------------------------------------------------------------------------ [INFO] [sonar:sonar] [INFO] Sonar host: http://localhost:8021/sonar [INFO] Sonar version: 2.4 [INFO] [sonar-core:internal] [INFO] Database dialect class org.sonar.jpa.dialect.MySql [INFO] ------------- Analyzing Cytoscape Table Browser Implementation [INFO] Selected quality profile : [name=Cytoscape,language=java] [INFO] Configure maven plugins... [INFO] Sensor JavaSourceImporter... [INFO] Sensor JavaSourceImporter done: 555 ms [INFO] Sensor AsynchronousMeasuresSensor... [INFO] Sensor AsynchronousMeasuresSensor done: 42 ms [INFO] Sensor SquidSensor... [INFO] Java AST scan... [INFO] Java AST scan done: 719 ms [INFO] Java bytecode scan... [WARN] Class 'org/cytoscape/browser/internal/MyCellRenderer' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/AttributeListModel' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/AttributeListModel' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTableModel' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/DeletionDialog' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/DeletionDialog' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/DeletionDialog' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/DeletionDialog' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTableModel' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTableModel' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTableModel' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MultiLineTableCellEditor$ResizableTextArea$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MyTableCellEditor' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTableCellRenderer' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/AttributeListModel' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/RowSetMicroListenerProxy' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MultiLineTableCellEditor$ResizableTextArea' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTableModel' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/DeletionDialog$3' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/AttrNameAndVisibility' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MyTableCellEditor' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/DeletionDialog$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/ValidatedObjectAndEditString' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/DeletionDialog$2' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/DeletionDialog' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTableModel' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTableCellRenderer' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/TableChooser' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/TableChooser' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/TableChooser' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTableModel' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTableModel' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTableModel$ListParserState' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/TableChooser' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MultiLineTableCellEditor' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MyComboBoxModel' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MyCellRenderer' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MultiLineTableCellEditor$ResizableTextArea$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/AttributeListModel' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/RowSetMicroListenerProxy' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MultiLineTableCellEditor$ResizableTextArea' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/DeletionDialog$3' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/AttrNameAndVisibility' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MyTableCellEditor' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/DeletionDialog$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/ValidatedObjectAndEditString' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/DeletionDialog$2' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/DeletionDialog' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTableModel' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTableCellRenderer' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTableModel$ListParserState' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/TableChooser' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MultiLineTableCellEditor' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MyComboBoxModel' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MyCellRenderer' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MultiLineTableCellEditor$ResizableTextArea$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/AttributeListModel' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/RowSetMicroListenerProxy' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MultiLineTableCellEditor$ResizableTextArea' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/DeletionDialog$3' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/AttrNameAndVisibility' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MyTableCellEditor' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/DeletionDialog$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/ValidatedObjectAndEditString' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/DeletionDialog$2' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/DeletionDialog' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTableModel' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTableCellRenderer' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTableModel$ListParserState' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/TableChooser' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MultiLineTableCellEditor' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MyComboBoxModel' is not accessible through the ClassLoader. [INFO] Java bytecode scan done: 322 ms [INFO] Squid extraction... [INFO] Package design analysis... [INFO] Package design analysis done: 32 ms [INFO] Squid extraction done: 525 ms [INFO] Sensor SquidSensor done: 1675 ms [INFO] Sensor FindbugsSensor... [INFO] Execute Findbugs 1.3.9... [INFO] Findbugs output report: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/target/sonar/findbugs-result.xml> The following classes needed for analysis were missing: org.cytoscape.browser.internal.MyTableCellEditor org.cytoscape.browser.internal.TableChooser org.cytoscape.browser.ui.DeletionDialog org.cytoscape.browser.internal.AttributeListModel org.cytoscape.browser.internal.BrowserTableCellRenderer org.cytoscape.browser.internal.BrowserTableModel [INFO] Execute Findbugs 1.3.9 done: 8359 ms [INFO] Sensor FindbugsSensor done: 8518 ms [INFO] Execute maven plugin cobertura-maven-plugin... [INFO] ------------------------------------------------------------------------ [INFO] Building Cytoscape Table Browser Implementation [INFO] task-segment: [org.codehaus.mojo:cobertura-maven-plugin::cobertura] [INFO] ------------------------------------------------------------------------ [INFO] Preparing cobertura:cobertura [INFO] [resources:resources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 21 resources [INFO] [pax:compile] [INFO] Compiling 8 source files to <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/target/classes> [INFO] [recovering meta-data] [INFO] ------------------------------------------------------------------------ [ERROR] BUILD ERROR [INFO] ------------------------------------------------------------------------ [INFO] Can not execute Sonar Embedded error: Unable to execute maven plugin Compilation failure <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/BrowserTableModel.java>:[321,15] compile(java.lang.String,java.util.Map<java.lang.String,java.lang.Class<?>>) in org.cytoscape.equations.EqnCompiler cannot be applied to (java.lang.String,java.util.Map<java.lang.String,java.lang.Class>) [INFO] ------------------------------------------------------------------------ [INFO] For more information, run Maven with the -e switch [INFO] ------------------------------------------------------------------------ [INFO] Total time: 21 seconds [INFO] Finished at: Tue Jan 04 21:56:34 EST 2011 [INFO] Final Memory: 83M/782M [INFO] ------------------------------------------------------------------------ -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/cytoscape-cvs?hl=en.
