See <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/171/changes>
Changes: [ruschein] Now we use the CyTableRowChangeTracker. [ruschein] Final changes before moving it into model-api. ------------------------------------------ [...truncated 132 lines...] [INFO] Total time: 11 seconds [INFO] Finished at: Tue Jan 18 13:01:39 EST 2011 [INFO] Final Memory: 53M/600M [INFO] ------------------------------------------------------------------------ Sending e-mails to: [email protected] channel stopped [trunk] $ /R1/tools/maven/apache-maven-2.1.0/bin/mvn org.codehaus.sonar:sonar-maven-plugin:1.8:sonar -Dsonar.jdbc.driver=com.mysql.jdbc.Driver -Dsonar.jdbc.username=sonar -Dsonar.jdbc.password=deploysonar -Dsonar.jdbc.url=jdbc:mysql://localhost:3306/sonar -Dsonar.host.url=http://localhost:8021/sonar/ -Dsonar.skipInstall=true [INFO] Scanning for projects... WAGON_VERSION: 1.0-beta-2 [INFO] ------------------------------------------------------------------------ [INFO] Building Cytoscape Table Browser Implementation [INFO] task-segment: [org.codehaus.sonar:sonar-maven-plugin:1.8:sonar] (aggregator-style) [INFO] ------------------------------------------------------------------------ [INFO] [sonar:sonar] [INFO] Sonar host: http://localhost:8021/sonar [INFO] Sonar version: 2.4 Downloading: http://localhost:8021/sonar/deploy/maven/org/codehaus/sonar/runtime/sonar-core-maven-plugin/20110118010112/sonar-core-maven-plugin-20110118010112.pom 1863/511b 511b downloaded (sonar-core-maven-plugin-20110118010112.pom) Downloading: http://localhost:8021/sonar/deploy/maven/org/codehaus/sonar/runtime/sonar-core-maven-plugin/20110118010112/sonar-core-maven-plugin-20110118010112.jar 0/6K 1/6K 1/6K 2/6K 2/6K 3/6K 4/6K 4/6K 5/6K 5/6K 6/6K 6/6K 7/6K 8/6K 6K downloaded (sonar-core-maven-plugin-20110118010112.jar) [INFO] [sonar-core:internal] [INFO] Database dialect class org.sonar.jpa.dialect.MySql [INFO] ------------- Analyzing Cytoscape Table Browser Implementation [INFO] Selected quality profile : [name=Cytoscape,language=java] [INFO] Configure maven plugins... [INFO] Sensor JavaSourceImporter... [INFO] Sensor JavaSourceImporter done: 539 ms [INFO] Sensor AsynchronousMeasuresSensor... [INFO] Sensor AsynchronousMeasuresSensor done: 26 ms [INFO] Sensor SquidSensor... [INFO] Java AST scan... [INFO] Java AST scan done: 739 ms [INFO] Java bytecode scan... [WARN] Class 'org/cytoscape/browser/internal/MultiLineTableCellEditor$ResizableTextArea$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTable' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTable$3' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/DeletionDialog$3' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTable$2' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTable$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTable$CellEditorRemover' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTable$5' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/DeletionDialog$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTable$4' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/DeletionDialog$2' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/TableBrowser' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTableCellRenderer' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/util/HyperLinkOut' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/TableChooser' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MultiLineTableCellEditor' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MyCellRenderer' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MyTableRowChangeTracker' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/DeletionDialog' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/DeletionDialog' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/DeletionDialog' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/DeletionDialog' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/ApplicationDomain' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/FormulaBuilderDialog$5' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/FormulaBuilderDialog$4' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/FormulaBuilderDialog$6' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/FormulaBuilderDialog$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/FormulaBuilderDialog$3' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/FormulaBuilderDialog$2' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MultiLineTableCellEditor$ResizableTextArea' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/TableComparator' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/FormulaBuilderDialog' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/FormulaBuilderDialog' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/FormulaBuilderDialog' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/util/HyperLinkOut$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MyTableColumnModel' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/ValidatedObjectAndEditString' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/DeletionDialog' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MyTableRowChangeTracker' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/ValidatedObjectAndEditString' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/ValidatedObjectAndEditString' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MyTableRowChangeTracker' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/FormulaBuilderDialog' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MyComboBoxModel' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MultiLineTableCellEditor$ResizableTextArea$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTable' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTable$3' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/DeletionDialog$3' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTable$2' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTable$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTable$CellEditorRemover' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTable$5' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/DeletionDialog$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTable$4' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/DeletionDialog$2' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/TableBrowser' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTableCellRenderer' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/util/HyperLinkOut' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/TableChooser' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MultiLineTableCellEditor' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MyCellRenderer' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MyTableRowChangeTracker' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/ApplicationDomain' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/FormulaBuilderDialog$5' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/FormulaBuilderDialog$4' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/FormulaBuilderDialog$6' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/FormulaBuilderDialog$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/FormulaBuilderDialog$3' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/FormulaBuilderDialog$2' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MultiLineTableCellEditor$ResizableTextArea' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/TableComparator' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/util/HyperLinkOut$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MyTableColumnModel' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/ValidatedObjectAndEditString' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/DeletionDialog' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/FormulaBuilderDialog' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MyComboBoxModel' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MultiLineTableCellEditor$ResizableTextArea$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTable' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTable$3' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/DeletionDialog$3' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTable$2' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTable$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTable$CellEditorRemover' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTable$5' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/DeletionDialog$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTable$4' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/DeletionDialog$2' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/TableBrowser' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/BrowserTableCellRenderer' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/util/HyperLinkOut' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/TableChooser' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MultiLineTableCellEditor' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MyCellRenderer' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MyTableRowChangeTracker' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/ApplicationDomain' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/FormulaBuilderDialog$5' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/FormulaBuilderDialog$4' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/FormulaBuilderDialog$6' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/FormulaBuilderDialog$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/FormulaBuilderDialog$3' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/FormulaBuilderDialog$2' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MultiLineTableCellEditor$ResizableTextArea' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/TableComparator' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/util/HyperLinkOut$1' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MyTableColumnModel' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/ValidatedObjectAndEditString' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/DeletionDialog' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/ui/FormulaBuilderDialog' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/MyComboBoxModel' is not accessible through the ClassLoader. [INFO] Java bytecode scan done: 204 ms [INFO] Squid extraction... [INFO] Package design analysis... [INFO] Package design analysis done: 18 ms [INFO] Squid extraction done: 455 ms [INFO] Sensor SquidSensor done: 1459 ms [INFO] Sensor FindbugsSensor... [INFO] Execute Findbugs 1.3.9... [INFO] Findbugs output report: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/target/sonar/findbugs-result.xml> The following classes needed for analysis were missing: org.cytoscape.browser.ui.FormulaBuilderDialog org.cytoscape.browser.internal.MyTableRowChangeTracker org.cytoscape.browser.ui.DeletionDialog org.cytoscape.browser.internal.ValidatedObjectAndEditString [INFO] Execute Findbugs 1.3.9 done: 11468 ms [INFO] Sensor FindbugsSensor done: 11788 ms [INFO] Execute maven plugin cobertura-maven-plugin... [INFO] artifact org.codehaus.mojo:cobertura-maven-plugin: checking for updates from maven2-repository.dev.java.net [INFO] artifact org.codehaus.mojo:cobertura-maven-plugin: checking for updates from maven-repository.dev.java.net [INFO] ------------------------------------------------------------------------ [INFO] Building Cytoscape Table Browser Implementation [INFO] task-segment: [org.codehaus.mojo:cobertura-maven-plugin::cobertura] [INFO] ------------------------------------------------------------------------ [INFO] Preparing cobertura:cobertura [INFO] [resources:resources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 21 resources [INFO] [pax:compile] [INFO] Compiling 11 source files to <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/target/classes> [INFO] [cobertura:instrument] [INFO] Cobertura 1.9.4.1 - GNU GPL License (NO WARRANTY) - See COPYRIGHT file Instrumenting 58 files to <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/target/generated-classes/cobertura> Cobertura: Saved information on 58 classes. Instrument time: 3748ms [INFO] Instrumentation was successful. [INFO] [resources:testResources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] skip non existing resourceDirectory <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/test/resources> [INFO] [pax:testCompile] [INFO] No sources to compile [INFO] [surefire:test] [INFO] No tests to run. [INFO] [cobertura:cobertura] [INFO] Cobertura 1.9.4.1 - GNU GPL License (NO WARRANTY) - See COPYRIGHT file Cobertura: Loaded information on 58 classes. Report time: 2676ms [INFO] Cobertura Report generation was successful. [INFO] Execute maven plugin cobertura-maven-plugin done: 17054 ms [INFO] Sensor CoberturaSensor... [INFO] parsing <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/target/site/cobertura/coverage.xml> [INFO] Sensor CoberturaSensor done: 289 ms [INFO] Sensor CpdSensor... [INFO] Sensor CpdSensor done: 255 ms [INFO] Sensor CheckstyleSensor... [INFO] Execute Checkstyle 5.1... [INFO] Checkstyle configuration: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/target/sonar/checkstyle.xml> [INFO] Execute Checkstyle 5.1 done: 1299 ms [INFO] Sensor CheckstyleSensor done: 1323 ms [INFO] Sensor PmdSensor... [INFO] Execute PMD 4.2.5... [INFO] Java version: 1.6 [INFO] PMD configuration: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/target/sonar/pmd.xml> [INFO] PMD output report: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/target/sonar/pmd-result.xml> [INFO] Execute PMD 4.2.5 done: 4130 ms [INFO] Sensor PmdSensor done: 4250 ms [INFO] Sensor ProfileSensor... [INFO] Sensor ProfileSensor done: 25 ms [INFO] Sensor ProjectLinksSensor... [INFO] Sensor ProjectLinksSensor done: 5 ms [INFO] Sensor VersionEventsSensor... [INFO] Sensor VersionEventsSensor done: 36 ms [INFO] Sensor Maven dependencies... [INFO] Sensor Maven dependencies done: 125 ms [INFO] Sensor SurefireSensor... [INFO] parsing <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/target/surefire-reports> [INFO] Sensor SurefireSensor done: 33 ms [INFO] Execute decorators... [INFO] ANALYSIS SUCCESSFUL, you can browse http://localhost:8021/sonar [INFO] Database optimization... [INFO] Deleting files data before Tue Jan 18 01:02:41 EST 2011 [INFO] Deleting unprocessed data before Tue Jan 18 01:02:57 EST 2011 [INFO] Database optimization done: 16690 ms [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESSFUL [INFO] ------------------------------------------------------------------------ [INFO] Total time: 1 minute 7 seconds [INFO] Finished at: Tue Jan 18 13:02:58 EST 2011 [INFO] Final Memory: 78M/780M [INFO] ------------------------------------------------------------------------ -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/cytoscape-cvs?hl=en.
