See <http://cytoscape.wodaklab.org/hudson/job/BioMart%20Web%20Service%20Client/47/>
------------------------------------------ [...truncated 182 lines...] [INFO] Building jar: <http://cytoscape.wodaklab.org/hudson/job/BioMart%20Web%20Service%20Client/ws/trunk/target/webservice-biomart-client-0.0.1-SNAPSHOT-javadoc.jar> [INFO] Preparing source:jar [WARNING] Removing: jar from forked lifecycle, to prevent recursive invocation. [INFO] No goals needed for project - skipping [INFO] [source:jar {execution: attach-sources}] [INFO] Building jar: <http://cytoscape.wodaklab.org/hudson/job/BioMart%20Web%20Service%20Client/ws/trunk/target/webservice-biomart-client-0.0.1-SNAPSHOT-sources.jar> [INFO] [jar:test-jar {execution: default}] [WARNING] JAR will be empty - no content was marked for inclusion! [INFO] Building jar: <http://cytoscape.wodaklab.org/hudson/job/BioMart%20Web%20Service%20Client/ws/trunk/target/webservice-biomart-client-0.0.1-SNAPSHOT-tests.jar> [INFO] [install:install] [INFO] Installing <http://cytoscape.wodaklab.org/hudson/job/BioMart%20Web%20Service%20Client/ws/trunk/target/webservice-biomart-client-0.0.1-SNAPSHOT.jar> to /home/bturner/.m2/repository/org/cytoscape/webservice-biomart-client/0.0.1-SNAPSHOT/webservice-biomart-client-0.0.1-SNAPSHOT.jar [INFO] Installing <http://cytoscape.wodaklab.org/hudson/job/BioMart%20Web%20Service%20Client/ws/trunk/target/webservice-biomart-client-0.0.1-SNAPSHOT-javadoc.jar> to /home/bturner/.m2/repository/org/cytoscape/webservice-biomart-client/0.0.1-SNAPSHOT/webservice-biomart-client-0.0.1-SNAPSHOT-javadoc.jar [INFO] Installing <http://cytoscape.wodaklab.org/hudson/job/BioMart%20Web%20Service%20Client/ws/trunk/target/webservice-biomart-client-0.0.1-SNAPSHOT-sources.jar> to /home/bturner/.m2/repository/org/cytoscape/webservice-biomart-client/0.0.1-SNAPSHOT/webservice-biomart-client-0.0.1-SNAPSHOT-sources.jar [INFO] Installing <http://cytoscape.wodaklab.org/hudson/job/BioMart%20Web%20Service%20Client/ws/trunk/target/webservice-biomart-client-0.0.1-SNAPSHOT-tests.jar> to /home/bturner/.m2/repository/org/cytoscape/webservice-biomart-client/0.0.1-SNAPSHOT/webservice-biomart-client-0.0.1-SNAPSHOT-tests.jar [INFO] [bundle:install] [WARNING] Exception while updating local OBR: Unable to read repository xml: file:/home/bturner/.m2/repository/repository.xml org.apache.maven.plugin.MojoExecutionException: Unable to read repository xml: file:/home/bturner/.m2/repository/repository.xml at org.apache.felix.obrplugin.ObrUpdate.parseRepositoryXml(ObrUpdate.java:295) at org.apache.felix.obrplugin.ObrInstall.execute(ObrInstall.java:140) at org.apache.maven.plugin.DefaultPluginManager.executeMojo(DefaultPluginManager.java:483) at hudson.maven.agent.PluginManagerInterceptor.executeMojo(PluginManagerInterceptor.java:182) at org.apache.maven.lifecycle.DefaultLifecycleExecutor.executeGoals(DefaultLifecycleExecutor.java:678) at org.apache.maven.lifecycle.DefaultLifecycleExecutor.executeGoalWithLifecycle(DefaultLifecycleExecutor.java:540) at org.apache.maven.lifecycle.DefaultLifecycleExecutor.executeGoal(DefaultLifecycleExecutor.java:519) at org.apache.maven.lifecycle.DefaultLifecycleExecutor.executeGoalAndHandleFailures(DefaultLifecycleExecutor.java:371) at org.apache.maven.lifecycle.DefaultLifecycleExecutor.executeTaskSegments(DefaultLifecycleExecutor.java:332) at org.apache.maven.lifecycle.DefaultLifecycleExecutor.execute(DefaultLifecycleExecutor.java:181) at org.apache.maven.lifecycle.LifecycleExecutorInterceptor.execute(LifecycleExecutorInterceptor.java:65) at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:356) at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:137) at org.apache.maven.cli.MavenCli.main(MavenCli.java:356) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:597) at org.codehaus.classworlds.Launcher.launchEnhanced(Launcher.java:315) at org.codehaus.classworlds.Launcher.launch(Launcher.java:255) at hudson.maven.agent.Main.launch(Main.java:165) at hudson.maven.MavenBuilder.call(MavenBuilder.java:165) at hudson.maven.MavenModuleSetBuild$Builder.call(MavenModuleSetBuild.java:750) at hudson.maven.MavenModuleSetBuild$Builder.call(MavenModuleSetBuild.java:694) at hudson.remoting.UserRequest.perform(UserRequest.java:114) at hudson.remoting.UserRequest.perform(UserRequest.java:48) at hudson.remoting.Request$2.run(Request.java:270) at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:441) at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303) at java.util.concurrent.FutureTask.run(FutureTask.java:138) at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908) at java.lang.Thread.run(Thread.java:619) Caused by: org.xmlpull.v1.XmlPullParserException: unexpected type (position:END_DOCUMENT null@3:1 in java.io.InputStreamReader@65596e13) at org.kxml2.io.KXmlParser.exception(Unknown Source) at org.kxml2.io.KXmlParser.nextTag(Unknown Source) at org.apache.felix.bundlerepository.impl.PullParser.parseRepository(PullParser.java:43) at org.apache.felix.bundlerepository.impl.DataModelHelperImpl.repository(DataModelHelperImpl.java:147) at org.apache.felix.bundlerepository.impl.DataModelHelperImpl.repository(DataModelHelperImpl.java:118) at org.apache.felix.obrplugin.ObrUpdate.parseRepositoryXml(ObrUpdate.java:291) ... 32 more [INFO] [deploy:deploy] [INFO] Retrieving previous build number from snapshots Uploading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/org/cytoscape/webservice-biomart-client/0.0.1-SNAPSHOT/webservice-biomart-client-0.0.1-20110125.000600-42.jar 59K uploaded (webservice-biomart-client-0.0.1-20110125.000600-42.jar) [INFO] Retrieving previous metadata from snapshots [INFO] Uploading repository metadata for: 'artifact org.cytoscape:webservice-biomart-client' [INFO] Retrieving previous metadata from snapshots [INFO] Uploading repository metadata for: 'snapshot org.cytoscape:webservice-biomart-client:0.0.1-SNAPSHOT' [INFO] Uploading project information for webservice-biomart-client 0.0.1-20110125.000600-42 [INFO] Retrieving previous build number from snapshots Uploading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/org/cytoscape/webservice-biomart-client/0.0.1-SNAPSHOT/webservice-biomart-client-0.0.1-20110125.000600-42-javadoc.jar 188K uploaded (webservice-biomart-client-0.0.1-20110125.000600-42-javadoc.jar) [INFO] Retrieving previous build number from snapshots Uploading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/org/cytoscape/webservice-biomart-client/0.0.1-SNAPSHOT/webservice-biomart-client-0.0.1-20110125.000600-42-sources.jar 39K uploaded (webservice-biomart-client-0.0.1-20110125.000600-42-sources.jar) [INFO] Retrieving previous build number from snapshots Uploading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/org/cytoscape/webservice-biomart-client/0.0.1-SNAPSHOT/webservice-biomart-client-0.0.1-20110125.000600-42-tests.jar 2K uploaded (webservice-biomart-client-0.0.1-20110125.000600-42-tests.jar) [INFO] [bundle:deploy] [INFO] Remote OBR update disabled (enable with -DremoteOBR) [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/BioMart%20Web%20Service%20Client/ws/trunk/pom.xml> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/BioMart Web Service Client/modules/org.cytoscape$webservice-biomart-client/builds/2011-01-24_19-05-32/archive/org.cytoscape/webservice-biomart-client/0.0.1-SNAPSHOT/pom.xml [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/BioMart%20Web%20Service%20Client/ws/trunk/target/webservice-biomart-client-0.0.1-SNAPSHOT.jar> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/BioMart Web Service Client/modules/org.cytoscape$webservice-biomart-client/builds/2011-01-24_19-05-32/archive/org.cytoscape/webservice-biomart-client/0.0.1-20110125.000600-42/webservice-biomart-client-0.0.1-SNAPSHOT.jar [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/BioMart%20Web%20Service%20Client/ws/trunk/target/webservice-biomart-client-0.0.1-SNAPSHOT-javadoc.jar> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/BioMart Web Service Client/modules/org.cytoscape$webservice-biomart-client/builds/2011-01-24_19-05-32/archive/org.cytoscape/webservice-biomart-client/0.0.1-20110125.000600-42/webservice-biomart-client-0.0.1-SNAPSHOT-javadoc.jar [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/BioMart%20Web%20Service%20Client/ws/trunk/target/webservice-biomart-client-0.0.1-SNAPSHOT-sources.jar> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/BioMart Web Service Client/modules/org.cytoscape$webservice-biomart-client/builds/2011-01-24_19-05-32/archive/org.cytoscape/webservice-biomart-client/0.0.1-20110125.000600-42/webservice-biomart-client-0.0.1-SNAPSHOT-sources.jar [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/BioMart%20Web%20Service%20Client/ws/trunk/target/webservice-biomart-client-0.0.1-SNAPSHOT-tests.jar> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/BioMart Web Service Client/modules/org.cytoscape$webservice-biomart-client/builds/2011-01-24_19-05-32/archive/org.cytoscape/webservice-biomart-client/0.0.1-20110125.000600-42/webservice-biomart-client-0.0.1-SNAPSHOT-tests.jar [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESSFUL [INFO] ------------------------------------------------------------------------ [INFO] Total time: 33 seconds [INFO] Finished at: Mon Jan 24 19:06:08 EST 2011 [INFO] Final Memory: 66M/723M [INFO] ------------------------------------------------------------------------ channel stopped [trunk] $ /R1/tools/maven/apache-maven-2.1.0/bin/mvn org.codehaus.sonar:sonar-maven-plugin:1.8:sonar -Dsonar.jdbc.driver=com.mysql.jdbc.Driver -Dsonar.jdbc.username=sonar -Dsonar.jdbc.password=deploysonar -Dsonar.jdbc.url=jdbc:mysql://localhost:3306/sonar -Dsonar.host.url=http://localhost:8021/sonar/ -Dsonar.skipInstall=true [INFO] Scanning for projects... WAGON_VERSION: 1.0-beta-2 [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.io.webservice-biomart-client [org.cytoscape.io.webservice.biomart] [INFO] task-segment: [org.codehaus.sonar:sonar-maven-plugin:1.8:sonar] (aggregator-style) [INFO] ------------------------------------------------------------------------ [INFO] [sonar:sonar] [INFO] Sonar host: http://localhost:8021/sonar [INFO] Sonar version: 2.4 [INFO] [sonar-core:internal] [INFO] Database dialect class org.sonar.jpa.dialect.MySql [INFO] ------------- Analyzing org.cytoscape.io.webservice-biomart-client [org.cytoscape.io.webservice.biomart] [INFO] Selected quality profile : [name=Cytoscape,language=java] [INFO] Configure maven plugins... [INFO] Sensor JavaSourceImporter... [INFO] Sensor JavaSourceImporter done: 750 ms [INFO] Sensor AsynchronousMeasuresSensor... [INFO] Sensor AsynchronousMeasuresSensor done: 37 ms [INFO] Sensor SquidSensor... [INFO] Java AST scan... [INFO] Java AST scan done: 907 ms [INFO] Java bytecode scan... [INFO] Java bytecode scan done: 417 ms [INFO] Squid extraction... [INFO] Package design analysis... [INFO] Package design analysis done: 72 ms [INFO] Squid extraction done: 839 ms [INFO] Sensor SquidSensor done: 2286 ms [INFO] Sensor FindbugsSensor... [INFO] Execute Findbugs 1.3.9... [FATAL ERROR] org.sonar.maven2.BatchMojo#execute() caused a linkage error (java.lang.NoClassDefFoundError) and may be out-of-date. Check the realms: [FATAL ERROR] Plugin realm = app0.child-container[org.codehaus.sonar.runtime:sonar-core-maven-plugin:20110124010112] urls[0] = file:/home/bturner/.m2/repository/org/codehaus/sonar/runtime/sonar-core-maven-plugin/20110124010112/sonar-core-maven-plugin-20110124010112.jar urls[1] = file:/home/bturner/.m2/repository/org/apache/maven/shared/maven-dependency-tree/1.2/maven-dependency-tree-1.2.jar urls[2] = file:/home/bturner/.m2/repository/org/codehaus/plexus/plexus-utils/1.1/plexus-utils-1.1.jar urls[3] = file:/home/bturner/.m2/repository/org/codehaus/sonar/sonar-batch/2.4/sonar-batch-2.4.jar urls[4] = file:/home/bturner/.m2/repository/org/codehaus/sonar/sonar-core/2.4/sonar-core-2.4.jar urls[5] = file:/home/bturner/.m2/repository/org/codehaus/sonar/sonar-plugin-api/2.4/sonar-plugin-api-2.4.jar urls[6] = file:/home/bturner/.m2/repository/org/codehaus/sonar/sonar-check-api/2.4/sonar-check-api-2.4.jar urls[7] = file:/home/bturner/.m2/repository/org/codehaus/sonar/sonar-colorizer/2.4/sonar-colorizer-2.4.jar urls[8] = file:/home/bturner/.m2/repository/commons-io/commons-io/1.4/commons-io-1.4.jar urls[9] = file:/home/bturner/.m2/repository/org/codehaus/sonar/sonar-channel/2.4/sonar-channel-2.4.jar urls[10] = file:/home/bturner/.m2/repository/org/slf4j/slf4j-api/1.5.6/slf4j-api-1.5.6.jar urls[11] = file:/home/bturner/.m2/repository/org/codehaus/sonar/sonar-duplications/2.4/sonar-duplications-2.4.jar urls[12] = file:/home/bturner/.m2/repository/org/codehaus/sonar/sonar-graph/2.4/sonar-graph-2.4.jar urls[13] = file:/home/bturner/.m2/repository/commons-lang/commons-lang/2.4/commons-lang-2.4.jar urls[14] = file:/home/bturner/.m2/repository/com/google/collections/google-collections/1.0/google-collections-1.0.jar urls[15] = file:/home/bturner/.m2/repository/org/codehaus/sonar/sonar-squid/2.4/sonar-squid-2.4.jar urls[16] = file:/home/bturner/.m2/repository/org/picocontainer/picocontainer/2.10.2/picocontainer-2.10.2.jar urls[17] = file:/home/bturner/.m2/repository/javax/annotation/jsr250-api/1.0/jsr250-api-1.0.jar urls[18] = file:/home/bturner/.m2/repository/javax/inject/javax.inject/1/javax.inject-1.jar urls[19] = file:/home/bturner/.m2/repository/org/hibernate/hibernate-core/3.3.2.GA/hibernate-core-3.3.2.GA.jar urls[20] = file:/home/bturner/.m2/repository/antlr/antlr/2.7.6/antlr-2.7.6.jar urls[21] = file:/home/bturner/.m2/repository/commons-collections/commons-collections/3.2.1/commons-collections-3.2.1.jar urls[22] = file:/home/bturner/.m2/repository/dom4j/dom4j/1.6.1/dom4j-1.6.1.jar urls[23] = file:/home/bturner/.m2/repository/xml-apis/xml-apis/1.3.03/xml-apis-1.3.03.jar urls[24] = file:/home/bturner/.m2/repository/org/hibernate/hibernate-annotations/3.4.0.GA/hibernate-annotations-3.4.0.GA.jar urls[25] = file:/home/bturner/.m2/repository/org/hibernate/ejb3-persistence/1.0.2.GA/ejb3-persistence-1.0.2.GA.jar urls[26] = file:/home/bturner/.m2/repository/org/hibernate/hibernate-commons-annotations/3.1.0.GA/hibernate-commons-annotations-3.1.0.GA.jar urls[27] = file:/home/bturner/.m2/repository/org/hibernate/hibernate-entitymanager/3.4.0.GA/hibernate-entitymanager-3.4.0.GA.jar urls[28] = file:/home/bturner/.m2/repository/javassist/javassist/3.4.GA/javassist-3.4.GA.jar urls[29] = file:/home/bturner/.m2/repository/geronimo-spec/geronimo-spec-jta/1.0-M1/geronimo-spec-jta-1.0-M1.jar urls[30] = file:/home/bturner/.m2/repository/commons-dbcp/commons-dbcp/1.3/commons-dbcp-1.3.jar urls[31] = file:/home/bturner/.m2/repository/commons-pool/commons-pool/1.5.4/commons-pool-1.5.4.jar urls[32] = file:/home/bturner/.m2/repository/org/apache/maven/shared/maven-common-artifact-filters/1.2/maven-common-artifact-filters-1.2.jar urls[33] = file:/home/bturner/.m2/repository/org/apache/maven/shared/maven-plugin-testing-harness/1.1/maven-plugin-testing-harness-1.1.jar urls[34] = file:/home/bturner/.m2/repository/org/codehaus/plexus/plexus-archiver/1.0-alpha-7/plexus-archiver-1.0-alpha-7.jar urls[35] = file:/home/bturner/.m2/repository/commons-configuration/commons-configuration/1.6/commons-configuration-1.6.jar urls[36] = file:/home/bturner/.m2/repository/commons-digester/commons-digester/1.8/commons-digester-1.8.jar urls[37] = file:/home/bturner/.m2/repository/commons-beanutils/commons-beanutils/1.7.0/commons-beanutils-1.7.0.jar urls[38] = file:/home/bturner/.m2/repository/commons-beanutils/commons-beanutils-core/1.8.0/commons-beanutils-core-1.8.0.jar urls[39] = file:/home/bturner/.m2/repository/commons-codec/commons-codec/1.4/commons-codec-1.4.jar urls[40] = file:/home/bturner/.m2/repository/org/hibernate/hibernate-ehcache/3.3.2.GA/hibernate-ehcache-3.3.2.GA.jar urls[41] = file:/home/bturner/.m2/repository/net/sf/ehcache/ehcache/1.2.3/ehcache-1.2.3.jar urls[42] = file:/home/bturner/.m2/repository/jfree/jfreechart/1.0.9/jfreechart-1.0.9.jar urls[43] = file:/home/bturner/.m2/repository/jfree/jcommon/1.0.12/jcommon-1.0.12.jar urls[44] = file:/home/bturner/.m2/repository/org/slf4j/jcl-over-slf4j/1.5.6/jcl-over-slf4j-1.5.6.jar urls[45] = file:/home/bturner/.m2/repository/org/slf4j/log4j-over-slf4j/1.5.6/log4j-over-slf4j-1.5.6.jar urls[46] = file:/home/bturner/.m2/repository/com/thoughtworks/xstream/xstream/1.3.1/xstream-1.3.1.jar urls[47] = file:/home/bturner/.m2/repository/xpp3/xpp3/1.1.3.3/xpp3-1.1.3.3.jar urls[48] = file:/home/bturner/.m2/repository/org/codehaus/woodstox/woodstox-core-lgpl/4.0.4/woodstox-core-lgpl-4.0.4.jar urls[49] = file:/home/bturner/.m2/repository/stax/stax-api/1.0.1/stax-api-1.0.1.jar urls[50] = file:/home/bturner/.m2/repository/org/codehaus/woodstox/stax2-api/3.0.1/stax2-api-3.0.1.jar urls[51] = file:/home/bturner/.m2/repository/org/codehaus/staxmate/staxmate/2.0.0/staxmate-2.0.0.jar urls[52] = file:/home/bturner/.m2/repository/xerces/xercesImpl/2.8.1/xercesImpl-2.8.1.jar urls[53] = file:/home/bturner/.m2/repository/xalan/xalan/2.7.1/xalan-2.7.1.jar urls[54] = file:/home/bturner/.m2/repository/xalan/serializer/2.7.1/serializer-2.7.1.jar urls[55] = file:/home/bturner/.m2/repository/org/codehaus/sonar/sonar-deprecated/2.4/sonar-deprecated-2.4.jar urls[56] = file:/home/bturner/.m2/repository/ch/qos/logback/logback-classic/0.9.15/logback-classic-0.9.15.jar urls[57] = file:/home/bturner/.m2/repository/ch/qos/logback/logback-core/0.9.15/logback-core-0.9.15.jar [FATAL ERROR] Container realm = plexus.core urls[0] = file:/R1/tools/maven/apache-maven-2.1.0/lib/maven-2.1.0-uber.jar [FATAL ERROR] org.sonar.mojo.bootstrap.SonarMojo#execute() caused a linkage error (java.lang.NoClassDefFoundError) and may be out-of-date. Check the realms: [FATAL ERROR] Plugin realm = app0.child-container[org.codehaus.sonar:sonar-maven-plugin:1.8] urls[0] = file:/home/bturner/.m2/repository/org/codehaus/sonar/sonar-maven-plugin/1.8/sonar-maven-plugin-1.8.jar urls[1] = file:/home/bturner/.m2/repository/commons-io/commons-io/1.4/commons-io-1.4.jar urls[2] = file:/home/bturner/.m2/repository/commons-lang/commons-lang/2.4/commons-lang-2.4.jar urls[3] = file:/home/bturner/.m2/repository/xerces/xercesImpl/2.8.1/xercesImpl-2.8.1.jar urls[4] = file:/home/bturner/.m2/repository/xml-apis/xml-apis/1.3.03/xml-apis-1.3.03.jar urls[5] = file:/home/bturner/.m2/repository/org/codehaus/plexus/plexus-utils/1.1/plexus-utils-1.1.jar [FATAL ERROR] Container realm = plexus.core urls[0] = file:/R1/tools/maven/apache-maven-2.1.0/lib/maven-2.1.0-uber.jar [INFO] ------------------------------------------------------------------------ [ERROR] FATAL ERROR [INFO] ------------------------------------------------------------------------ [INFO] org/apache/bcel/classfile/ClassFormatException org.apache.bcel.classfile.ClassFormatException [INFO] ------------------------------------------------------------------------ [INFO] Trace java.lang.NoClassDefFoundError: org/apache/bcel/classfile/ClassFormatException at org.sonar.plugins.findbugs.FindbugsExecutor.execute(FindbugsExecutor.java:66) at org.sonar.plugins.findbugs.FindbugsSensor.analyse(FindbugsSensor.java:60) at org.sonar.batch.SensorsExecutor.execute(SensorsExecutor.java:58) at org.sonar.batch.ProjectBatch.execute(ProjectBatch.java:59) at org.sonar.batch.Batch.analyzeProject(Batch.java:120) at org.sonar.batch.Batch.analyzeProjects(Batch.java:83) at org.sonar.batch.Batch.execute(Batch.java:58) at org.sonar.maven2.BatchMojo.executeBatch(BatchMojo.java:142) at org.sonar.maven2.BatchMojo.execute(BatchMojo.java:133) at org.apache.maven.plugin.DefaultPluginManager.executeMojo(DefaultPluginManager.java:483) at org.sonar.mojo.bootstrap.Bootstraper.executeMojo(Bootstraper.java:76) at org.sonar.mojo.bootstrap.Bootstraper.start(Bootstraper.java:62) at org.sonar.mojo.bootstrap.SonarMojo.execute(SonarMojo.java:112) at org.apache.maven.plugin.DefaultPluginManager.executeMojo(DefaultPluginManager.java:483) at org.apache.maven.lifecycle.DefaultLifecycleExecutor.executeGoals(DefaultLifecycleExecutor.java:678) at org.apache.maven.lifecycle.DefaultLifecycleExecutor.executeStandaloneGoal(DefaultLifecycleExecutor.java:553) at org.apache.maven.lifecycle.DefaultLifecycleExecutor.executeGoal(DefaultLifecycleExecutor.java:523) at org.apache.maven.lifecycle.DefaultLifecycleExecutor.executeGoalAndHandleFailures(DefaultLifecycleExecutor.java:371) at org.apache.maven.lifecycle.DefaultLifecycleExecutor.executeTaskSegments(DefaultLifecycleExecutor.java:268) at org.apache.maven.lifecycle.DefaultLifecycleExecutor.execute(DefaultLifecycleExecutor.java:181) at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:356) at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:137) at org.apache.maven.cli.MavenCli.main(MavenCli.java:356) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:597) at org.codehaus.classworlds.Launcher.launchEnhanced(Launcher.java:315) at org.codehaus.classworlds.Launcher.launch(Launcher.java:255) at org.codehaus.classworlds.Launcher.mainWithExitCode(Launcher.java:430) at org.codehaus.classworlds.Launcher.main(Launcher.java:375) Caused by: java.lang.ClassNotFoundException: org.apache.bcel.classfile.ClassFormatException at java.net.URLClassLoader$1.run(URLClassLoader.java:202) at java.security.AccessController.doPrivileged(Native Method) at java.net.URLClassLoader.findClass(URLClassLoader.java:190) at java.lang.ClassLoader.loadClass(ClassLoader.java:307) at org.codehaus.classworlds.RealmClassLoader.loadClassDirect(RealmClassLoader.java:195) at org.codehaus.classworlds.DefaultClassRealm.loadClass(DefaultClassRealm.java:255) at org.codehaus.classworlds.DefaultClassRealm.loadClass(DefaultClassRealm.java:274) at org.codehaus.classworlds.RealmClassLoader.loadClass(RealmClassLoader.java:214) at java.lang.ClassLoader.loadClass(ClassLoader.java:248) ... 31 more [INFO] ------------------------------------------------------------------------ [INFO] Total time: 10 seconds [INFO] Finished at: Mon Jan 24 19:06:20 EST 2011 [INFO] Final Memory: 43M/600M [INFO] ------------------------------------------------------------------------ -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. 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