Author: pwang Date: 2011-01-25 10:35:10 -0800 (Tue, 25 Jan 2011) New Revision: 23605
Added: csplugins/trunk/ucsd/pwang/sample02/pom.xml csplugins/trunk/ucsd/pwang/sample02/src/main/ csplugins/trunk/ucsd/pwang/sample02/src/main/java/ csplugins/trunk/ucsd/pwang/sample02/src/main/java/com/ csplugins/trunk/ucsd/pwang/sample02/src/main/java/com/mycompany/ csplugins/trunk/ucsd/pwang/sample02/src/main/java/com/mycompany/sample/ csplugins/trunk/ucsd/pwang/sample02/src/main/java/com/mycompany/sample/internal/ csplugins/trunk/ucsd/pwang/sample02/src/main/java/com/mycompany/sample/internal/Sample02Plugin.java csplugins/trunk/ucsd/pwang/sample02/src/main/java/com/mycompany/sample/internal/action/ csplugins/trunk/ucsd/pwang/sample02/src/main/java/com/mycompany/sample/internal/action/Sample02Action.java csplugins/trunk/ucsd/pwang/sample02/src/main/resources/ csplugins/trunk/ucsd/pwang/sample02/src/main/resources/plugin.props Log: re-organize Added: csplugins/trunk/ucsd/pwang/sample02/pom.xml =================================================================== --- csplugins/trunk/ucsd/pwang/sample02/pom.xml (rev 0) +++ csplugins/trunk/ucsd/pwang/sample02/pom.xml 2011-01-25 18:35:10 UTC (rev 23605) @@ -0,0 +1,118 @@ +<project xmlns="http://maven.apache.org/POM/4.0.0"; xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"; xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd";> + <modelVersion>4.0.0</modelVersion> + <groupId>org.mycompany</groupId> + <artifactId>sample02</artifactId> + <version>0.1</version> + <packaging>maven-plugin</packaging> + <name>sample02</name> + <description>Test plugin</description> + + <properties> + <bundle.symbolicName>com.mycompany.sample02</bundle.symbolicName> + <bundle.namespace>com.mycompany.sample</bundle.namespace> + </properties> + + <build> + <resources> + <resource> + <directory>src/main/resources</directory> + </resource> + <!-- + | example additional resource entries, useful when building Eclipse RCP applications + --> + <resource> + <directory>.</directory> + <includes> + <include>plugin.xml</include> + <include>plugin.properties</include> + <include>icons/**</include> + </includes> + </resource> + </resources> + <plugins> + + + <plugin> + <groupId>org.apache.maven.plugins</groupId> + <artifactId>maven-jar-plugin</artifactId> + <configuration> + <archive> + <manifestEntries> + <Cytoscape-Plugin>com.mycompany.sample.internal.Sample02Plugin</Cytoscape-Plugin> + </manifestEntries> + </archive> + </configuration> + </plugin> + + <plugin> + <groupId>org.apache.maven.plugins</groupId> + <artifactId>maven-surefire-plugin</artifactId> + <configuration> + <redirectTestOutputToFile>true</redirectTestOutputToFile> + </configuration> + </plugin> + <plugin> + <groupId>org.ops4j</groupId> + <artifactId>maven-pax-plugin</artifactId> + <version>1.4</version> + <!-- + | enable improved OSGi compilation support for the bundle life-cycle. + | to switch back to the standard bundle life-cycle, move this setting + | down to the maven-bundle-plugin section + --> + <extensions>true</extensions> + </plugin> + <plugin> + <groupId>org.apache.felix</groupId> + <artifactId>maven-bundle-plugin</artifactId> + <version>1.4.3</version> + <!-- + | the following instructions build a simple set of public/private classes into an OSGi bundle + --> + <configuration> + <instructions> + <Bundle-SymbolicName>${bundle.symbolicName}</Bundle-SymbolicName> + <Bundle-Version>${pom.version}</Bundle-Version> + <_include>-osgi.bnd</_include> + </instructions> + </configuration> + </plugin> + </plugins> + </build> + + + + + + + + <dependencies> + <dependency> + <groupId>org.cytoscape</groupId> + <artifactId>plugin-api</artifactId> + <version>3.0.0-alpha2-SNAPSHOT</version> + </dependency> + <dependency> + <groupId>org.cytoscape</groupId> + <artifactId>core-task-api</artifactId> + <version>3.0.0-alpha2-SNAPSHOT</version> + </dependency> + + + <dependency> + <groupId>org.cytoscape</groupId> + <artifactId>swing-application-api</artifactId> + <version>1.0-SNAPSHOT</version> + </dependency> + + <dependency> + <groupId>org.cytoscape</groupId> + <artifactId>work-swing-api</artifactId> + <version>1.0-SNAPSHOT</version> + </dependency> + + + </dependencies> + + +</project> Added: csplugins/trunk/ucsd/pwang/sample02/src/main/java/com/mycompany/sample/internal/Sample02Plugin.java =================================================================== --- csplugins/trunk/ucsd/pwang/sample02/src/main/java/com/mycompany/sample/internal/Sample02Plugin.java (rev 0) +++ csplugins/trunk/ucsd/pwang/sample02/src/main/java/com/mycompany/sample/internal/Sample02Plugin.java 2011-01-25 18:35:10 UTC (rev 23605) @@ -0,0 +1,21 @@ + +package com.mycompany.sample.internal; + +import org.cytoscape.plugin.CyPluginAdapter; +import com.mycompany.sample.internal.action.Sample02Action; +import org.cytoscape.plugin.CyPlugin; +import org.cytoscape.application.swing.CySwingApplication; + +/** + * An implementation of CyPluginAdapter + */ +public class Sample02Plugin extends CyPlugin { + + + public Sample02Plugin(CyPluginAdapter a){ + super(a); + + a.getCySwingApplication().addAction(new Sample02Action(a)); + + } +} Added: csplugins/trunk/ucsd/pwang/sample02/src/main/java/com/mycompany/sample/internal/action/Sample02Action.java =================================================================== --- csplugins/trunk/ucsd/pwang/sample02/src/main/java/com/mycompany/sample/internal/action/Sample02Action.java (rev 0) +++ csplugins/trunk/ucsd/pwang/sample02/src/main/java/com/mycompany/sample/internal/action/Sample02Action.java 2011-01-25 18:35:10 UTC (rev 23605) @@ -0,0 +1,78 @@ +/* + File: PreferenceAction.java + + Copyright (c) 2006, The Cytoscape Consortium (www.cytoscape.org) + + The Cytoscape Consortium is: + - Institute for Systems Biology + - University of California San Diego + - Memorial Sloan-Kettering Cancer Center + - Institut Pasteur + - Agilent Technologies + + This library is free software; you can redistribute it and/or modify it + under the terms of the GNU Lesser General Public License as published + by the Free Software Foundation; either version 2.1 of the License, or + any later version. + + This library is distributed in the hope that it will be useful, but + WITHOUT ANY WARRANTY, WITHOUT EVEN THE IMPLIED WARRANTY OF + MERCHANTABILITY OR FITNESS FOR A PARTICULAR PURPOSE. The software and + documentation provided hereunder is on an "as is" basis, and the + Institute for Systems Biology and the Whitehead Institute + have no obligations to provide maintenance, support, + updates, enhancements or modifications. In no event shall the + Institute for Systems Biology and the Whitehead Institute + be liable to any party for direct, indirect, special, + incidental or consequential damages, including lost profits, arising + out of the use of this software and its documentation, even if the + Institute for Systems Biology and the Whitehead Institute + have been advised of the possibility of such damage. See + the GNU Lesser General Public License for more details. + + You should have received a copy of the GNU Lesser General Public License + along with this library; if not, write to the Free Software Foundation, + Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA. + */ + +//------------------------------------------------------------------------- +// $Revision: 7760 $ +// $Date: 2006-06-26 09:28:49 -0700 (Mon, 26 Jun 2006) $ +// $Author: mes $ +//------------------------------------------------------------------------- +package com.mycompany.sample.internal.action; + +import java.awt.event.ActionEvent; +import org.cytoscape.application.swing.AbstractCyAction; +import org.cytoscape.plugin.CyPluginAdapter; + +//import org.cytoscape.application.swing.CySwingApplication; + +/** + * + */ +public class Sample02Action extends AbstractCyAction { + private final static long serialVersionUID = 12022346993206L; + + /** + * Creates a new action object. + */ + public Sample02Action(CyPluginAdapter adapter) { + + super("Sample02 Plugin", adapter.getCyApplicationManager()); + + System.out.println("\n\tcom.mycompany.sample.internal.action.Sample02Action()...."); + + setPreferredMenu("Plugins"); + } + + /** + * DOCUMENT ME! + * + * @param e + * DOCUMENT ME! + */ + public void actionPerformed(ActionEvent e) { + System.out.println("Sample02 plugin menu item is clicked!"); + } +} Added: csplugins/trunk/ucsd/pwang/sample02/src/main/resources/plugin.props =================================================================== --- csplugins/trunk/ucsd/pwang/sample02/src/main/resources/plugin.props (rev 0) +++ csplugins/trunk/ucsd/pwang/sample02/src/main/resources/plugin.props 2011-01-25 18:35:10 UTC (rev 23605) @@ -0,0 +1,27 @@ +# This props file would be filled out and included in the plugin jar file. This props file will be used +# to put information into the Plugin Manager about the plugin + + +# -- The following properties are REQUIRED -- # + +# The plugin name that will be displayed to users +pluginName=sample02 + +# Description used to give users information about the plugin such as what it does. +# Html tags are encouraged for formatting purposes. +pluginDescription=Cytoscape plugin sample02 ... + +# Plugin version number, this must be two numbers separated by a decimlal. Ex. 0.2, 14.03 +pluginVersion=0.1 + +# Compatible Cytoscape version +cytoscapeVersion=3.0 + +# Category, use one of the categories listed on the website or create your own +pluginCategory=Other + +# List of authors. Note each author and institution pair are separated by a : (colon) +# each additional author institution pair must be separated from other pairs bye a ; (semicolon) +pluginAuthorsIntsitutions=Peng-Liang Wang:UCSD + +# Date this plugin/plugin version was released releaseDate=November 18, 2010 -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/cytoscape-cvs?hl=en.
