See <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Network%20Analyzer%20Impl/139/changes>
Changes: [ruschein] Created a new CyColumn class. ------------------------------------------ [...truncated 556 lines...] [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/filter/Points2DFilterDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/dec/TwoCoefsDecorator' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/AnalysisDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/LongHistogramGroup' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/PlotParameterDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/Plugin' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/ChartDisplayPanel' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/NetAnalyzerAction' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/SimpleStatsPanel' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/MutInteger' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/io/StatsSerializer' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/dec/FittingReportDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/BatchResultsDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/AnalysisTableModel' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/sconnect/HelpConnector' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/ConnComponentsDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/SwingWorker$ThreadVar' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/CCInfo' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/filter/Points2DFilter' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/CompareDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/filter/ComplexParamFilter' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/ui/Cross' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/BatchAnalysisDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/IntRange' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/BatchSettingsDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/PathLengthData' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/Messages' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/GridSettings' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ConnComponentAnalyzer' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/LongHistogramFilterSettings' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/BatchNetworkAnalyzer' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/NetworkInspection' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/SwingWorker$2' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/charts/MyLogarithmicAxis' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/AnalysisError' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/VisualizeParameterDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/NetworkStatus' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/DirNetworkAnalyzer' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/io/Netstats2Reader' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/DegreeDistribution' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/AnalyzeSubsetAction' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/SwingWorker$1' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/BatchAnalysisAction' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/filter/IntHistogramFilterDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/SaveChartDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/IntHistogramFilterSettings' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/SumCountPair' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/LongHistogram' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/GOPTAlgorithm' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/Points2DVisualizer' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/filter/IntHistogramFilter' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/CCInfoInvComparator' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/ArrayUtils' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/charts/JFreeChartConn' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/Utils$MenuPaneHyperlinkListener' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/Decorators' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/LogBinDistribution' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/dec/Decorator' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/SettingsDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/InterpretationDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/Interpretations' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/io/SettingsSerializer' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/NetworkInterpretation' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/AxesSettings' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/filter/LongHistogramFilter' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/NetworkListDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/ReturnTypeComparator' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/io/Netstats1Reader' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/IntHistogramGroup' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/ScatterSettings' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/AboutAction' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/dec/LeastSquaresPowerLawDecorator' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/BatchAnalysisAction$1' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/MapParameterAction' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/NodeBetweenInfo' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/ClearMultEdgesDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/LongHistogramVisualizer' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/PluginSettings' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/dec/Fitter' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/RegInfo' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/AnalysisExecutor' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/Points2DFilterSettings' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/dec/FitData' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/InnerException' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/io/LineReader' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/Settings' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/Points2D' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/GeneralVisSettings' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/MapParameterDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/LoadNetstatsAction' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/SettingsAction' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/SettingsGroup' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/PlotParameterAction' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/Points2DGroup' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/dec/LeastSquaresLineDecorator' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/InterpretationCellRenderer' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/OpenBrowser' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/AttributeSetup' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/io/IOUtils' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/RemoveSelfLoopsAction' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/BooleanSettings' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/AboutDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/SettingsPanel' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/ComplexParam' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/Utils' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/FileCellRenderer' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/LongHistogramVisualizer$1' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/ComplexParamVisualizer' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/SwingWorker' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/IntHistogramVisualizer$1' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/IntHistogram' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/Utils' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/ui/Cross$Iterator' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/Version' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/ComboBoxRenderer' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/filter/ComplexParamFilterDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/filter/LongHistogramFilterDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/AnalyzeNetworkAction' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/ExtensionFileFilter' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/BarsSettings' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/XMLSerializable' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ConnComponentAction' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/RainbowCanvas' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/AnalysisListener' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/SupportedExtensions' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/NetModificationDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/sconnect/ServerUtils' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/UndirNetworkAnalyzer' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/NetworkStats' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/ChartExpandablePanel' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/IntHistogramVisualizer' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/RemDupEdgesAction' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/CompareAction' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/NetworkAnalyzer' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/NodeEdgeCanvas' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/NetworkAnalysisReport' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/SimpleUndirParams' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/PluginSettingsDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/SpringUtilities' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/CyNetworkUtils' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/PointShape' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/filter/Points2DFilterDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/dec/TwoCoefsDecorator' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/AnalysisDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/LongHistogramGroup' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/PlotParameterDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/Plugin' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/ChartDisplayPanel' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/NetAnalyzerAction' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/SimpleStatsPanel' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/MutInteger' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/io/StatsSerializer' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/dec/FittingReportDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/BatchResultsDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/AnalysisTableModel' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/sconnect/HelpConnector' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/ConnComponentsDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/SwingWorker$ThreadVar' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/CCInfo' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/filter/Points2DFilter' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/CompareDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/filter/ComplexParamFilter' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/ui/Cross' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/BatchAnalysisDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/IntRange' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/BatchSettingsDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/PathLengthData' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/Messages' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/GridSettings' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ConnComponentAnalyzer' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/LongHistogramFilterSettings' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/BatchNetworkAnalyzer' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/NetworkInspection' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/SwingWorker$2' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/charts/MyLogarithmicAxis' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/AnalysisError' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/VisualizeParameterDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/NetworkStatus' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/DirNetworkAnalyzer' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/io/Netstats2Reader' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/DegreeDistribution' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/AnalyzeSubsetAction' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/SwingWorker$1' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/BatchAnalysisAction' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/filter/IntHistogramFilterDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/SaveChartDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/IntHistogramFilterSettings' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/SumCountPair' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/LongHistogram' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/GOPTAlgorithm' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/Points2DVisualizer' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/filter/IntHistogramFilter' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/CCInfoInvComparator' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/ArrayUtils' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/charts/JFreeChartConn' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/Utils$MenuPaneHyperlinkListener' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/Decorators' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/LogBinDistribution' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/dec/Decorator' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/SettingsDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/InterpretationDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/Interpretations' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/io/SettingsSerializer' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/NetworkInterpretation' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/AxesSettings' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/filter/LongHistogramFilter' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/NetworkListDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/ReturnTypeComparator' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/io/Netstats1Reader' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/IntHistogramGroup' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/ScatterSettings' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/AboutAction' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/dec/LeastSquaresPowerLawDecorator' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/BatchAnalysisAction$1' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/MapParameterAction' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/NodeBetweenInfo' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/ClearMultEdgesDialog' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/LongHistogramVisualizer' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/PluginSettings' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/dec/Fitter' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/RegInfo' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/AnalysisExecutor' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/Points2DFilterSettings' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/ui/dec/FitData' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/InnerException' is not accessible through the ClassLoader. [WARN] Class 'de/mpg/mpi_inf/bioinf/netanalyzer/data/io/LineReader' is not accessible through the ClassLoader. [INFO] Java bytecode scan done: 91 ms [INFO] Squid extraction... [INFO] Package design analysis... [INFO] Package design analysis done: 9 ms [INFO] Squid extraction done: 2243 ms [INFO] Sensor SquidSensor done: 4025 ms [INFO] Sensor FindbugsSensor... [INFO] Execute Findbugs 1.3.9... [INFO] Findbugs output report: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Network%20Analyzer%20Impl/ws/trunk/target/sonar/findbugs-result.xml> [INFO] ------------------------------------------------------------------------ [ERROR] BUILD ERROR [INFO] ------------------------------------------------------------------------ [INFO] Can not execute Sonar Embedded error: Can not execute Findbugs No classes found to analyze in <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Network%20Analyzer%20Impl/ws/trunk/target/classes> */R1/resources/M2_MAVEN/repository/org/cytoscape/model-api/3.0.0-alpha3-SNAPSHOT/model-api-3.0.0-alpha3-SNAPSHOT.jar */R1/resources/M2_MAVEN/repository/org/cytoscape/event-api/3.0.0-alpha3/event-api-3.0.0-alpha3.jar */R1/resources/M2_MAVEN/repository/org/cytoscape/session-api/3.0.0-alpha2/session-api-3.0.0-alpha2.jar */R1/resources/M2_MAVEN/repository/org/cytoscape/vizmap-api/3.0.0-alpha2/vizmap-api-3.0.0-alpha2.jar */R1/resources/M2_MAVEN/repository/org/cytoscape/viewmodel-api/3.0.0-alpha3/viewmodel-api-3.0.0-alpha3.jar */R1/resources/M2_MAVEN/repository/org/cytoscape/presentation-api/3.0.0-alpha2/presentation-api-3.0.0-alpha2.jar */R1/resources/M2_MAVEN/repository/org/cytoscape/property-api/3.0.0-alpha2/property-api-3.0.0-alpha2.jar */R1/resources/M2_MAVEN/repository/org/cytoscape/swing-application-api/3.0.0-alpha1/swing-application-api-3.0.0-alpha1.jar */R1/resources/M2_MAVEN/repository/cytoscape-sun/jhall/1.0/jhall-1.0.jar */R1/resources/M2_MAVEN/repository/org/cytoscape/work-api/3.0.0-alpha1/work-api-3.0.0-alpha1.jar */R1/resources/M2_MAVEN/repository/org/ops4j/pax/logging/pax-logging-api/1.5.2/pax-logging-api-1.5.2.jar */R1/resources/M2_MAVEN/repository/org/cytoscape/core-task-api/3.0.0-alpha2/core-task-api-3.0.0-alpha2.jar */R1/resources/M2_MAVEN/repository/org/cytoscape/io-api/3.0.0-alpha2/io-api-3.0.0-alpha2.jar */R1/resources/M2_MAVEN/repository/org/cytoscape/wrappers/org.apache.lucene/3.0.2/org.apache.lucene-3.0.2.jar */R1/resources/M2_MAVEN/repository/cytoscape-temp/jfree-jfreechart/1.0.13/jfree-jfreechart-1.0.13.jar */R1/resources/M2_MAVEN/repository/cytoscape-temp/jfree-jcommon/1.0.15/jfree-jcommon-1.0.15.jar */R1/resources/M2_MAVEN/repository/org/jdom/com.springsource.org.jdom/1.1.0/com.springsource.org.jdom-1.1.0.jar */R1/resources/M2_MAVEN/repository/cytoscape-temp/l2fprod-common-sheet/7.3/l2fprod-common-sheet-7.3.jar */R1/resources/M2_MAVEN/repository/org/cytoscape/wrappers/org.swinglabs.swingx/0.9.7/org.swinglabs.swingx-0.9.7.jar */R1/resources/M2_MAVEN/repository/cytoscape-temp/l2fprod-common-shared/7.3/l2fprod-common-shared-7.3.jar */R1/resources/M2_MAVEN/repository/cytoscape-temp/freehep-graphicsio/2.0/freehep-graphicsio-2.0.jar */R1/resources/M2_MAVEN/repository/cytoscape-temp/freehep-graphicsio-svg/2.0/freehep-graphicsio-svg-2.0.jar */R1/resources/M2_MAVEN/repository/cytoscape-temp/freehep-graphics2d/2.0/freehep-graphics2d-2.0.jar */tmp/findbugs8911250122506527394.jar */tmp/findbugs5578255447616311973.jar */R1/tools/java/jdk1.6.0_20/jre/lib/resources.jar */R1/tools/java/jdk1.6.0_20/jre/lib/rt.jar */R1/tools/java/jdk1.6.0_20/jre/lib/jsse.jar */R1/tools/java/jdk1.6.0_20/jre/lib/jce.jar */R1/tools/java/jdk1.6.0_20/jre/lib/charsets.jar */R1/tools/java/jdk1.6.0_20/jre/lib/ext/dnsns.jar */R1/tools/java/jdk1.6.0_20/jre/lib/ext/localedata.jar */R1/tools/java/jdk1.6.0_20/jre/lib/ext/sunjce_provider.jar */R1/tools/java/jdk1.6.0_20/jre/lib/ext/sunpkcs11.jar [INFO] ------------------------------------------------------------------------ [INFO] For more information, run Maven with the -e switch [INFO] ------------------------------------------------------------------------ [INFO] Total time: 14 seconds [INFO] Finished at: Mon Jan 31 19:09:09 EST 2011 [INFO] Final Memory: 43M/592M [INFO] ------------------------------------------------------------------------ -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. 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