See <http://cytoscape.wodaklab.org/hudson/job/Cy%20Filter%20Impl/263/changes>
Changes: [kono] Changed 2D visual lexicon to to minimal lexicon. ------------------------------------------ Started by an SCM change Checking out http://chianti.ucsd.edu/svn/core3/filter-impl/trunk A osgi.bnd A src A src/main A src/main/java A src/main/java/org A src/main/java/org/cytoscape A src/main/java/org/cytoscape/filter A src/main/java/org/cytoscape/filter/internal AU src/main/java/org/cytoscape/filter/internal/FilterPanelSelectedListener.java A src/main/java/org/cytoscape/filter/internal/gui AU src/main/java/org/cytoscape/filter/internal/gui/FilterCytoPanelComponent.java A src/main/java/org/cytoscape/filter/internal/widgets A src/main/java/org/cytoscape/filter/internal/widgets/autocomplete A src/main/java/org/cytoscape/filter/internal/widgets/autocomplete/index A src/main/java/org/cytoscape/filter/internal/widgets/autocomplete/index/IndexFactory.java A src/main/java/org/cytoscape/filter/internal/widgets/autocomplete/index/NumberIndex.java A src/main/java/org/cytoscape/filter/internal/widgets/autocomplete/index/NumberIndexImpl.java A src/main/java/org/cytoscape/filter/internal/widgets/autocomplete/index/Trie.java A src/main/java/org/cytoscape/filter/internal/widgets/autocomplete/index/GenericIndex.java A src/main/java/org/cytoscape/filter/internal/widgets/autocomplete/index/Hit.java A src/main/java/org/cytoscape/filter/internal/widgets/autocomplete/index/GenericIndexImpl.java A src/main/java/org/cytoscape/filter/internal/widgets/autocomplete/index/TextIndex.java A src/main/java/org/cytoscape/filter/internal/widgets/autocomplete/index/IndexListener.java A src/main/java/org/cytoscape/filter/internal/widgets/autocomplete/index/TextIndexImpl.java A src/main/java/org/cytoscape/filter/internal/widgets/autocomplete/index/package.html A src/main/java/org/cytoscape/filter/internal/widgets/autocomplete/view A src/main/java/org/cytoscape/filter/internal/widgets/autocomplete/view/AutoCompleteDocument.java A src/main/java/org/cytoscape/filter/internal/widgets/autocomplete/view/ComboBoxFactory.java A src/main/java/org/cytoscape/filter/internal/widgets/autocomplete/view/TextBoxRenderer.java A src/main/java/org/cytoscape/filter/internal/widgets/autocomplete/view/TextIndexComboBox.java A src/main/java/org/cytoscape/filter/internal/widgets/autocomplete/view/package.html A src/main/java/org/cytoscape/filter/internal/widgets/slider A src/main/java/org/cytoscape/filter/internal/widgets/slider/JRangeSliderExtended.java A src/main/java/org/cytoscape/filter/internal/widgets/slider/package.html A src/main/java/org/cytoscape/filter/internal/filters A src/main/java/org/cytoscape/filter/internal/filters/AdvancedSetting.java A src/main/java/org/cytoscape/filter/internal/filters/FilterPlugin.java A src/main/java/org/cytoscape/filter/internal/filters/NumericFilter.java A src/main/java/org/cytoscape/filter/internal/filters/CompositeFilter.java A src/main/java/org/cytoscape/filter/internal/filters/EdgeInteractionFilter.java A src/main/java/org/cytoscape/filter/internal/filters/StringFilter.java A src/main/java/org/cytoscape/filter/internal/filters/Relation.java A src/main/java/org/cytoscape/filter/internal/filters/FilterIO.java A src/main/java/org/cytoscape/filter/internal/filters/CyFilter.java A src/main/java/org/cytoscape/filter/internal/filters/TopologyFilter.java A src/main/java/org/cytoscape/filter/internal/filters/AtomicFilter.java A src/main/java/org/cytoscape/filter/internal/filters/InteractionFilter.java A src/main/java/org/cytoscape/filter/internal/filters/FilterMenuItemAction.java A src/main/java/org/cytoscape/filter/internal/filters/view A src/main/java/org/cytoscape/filter/internal/filters/view/EditRangeDialog.java A src/main/java/org/cytoscape/filter/internal/filters/view/FilterSettingPanel.java A src/main/java/org/cytoscape/filter/internal/filters/view/InteractionFilterPanel.java A src/main/java/org/cytoscape/filter/internal/filters/view/EditNameDialog.java A src/main/java/org/cytoscape/filter/internal/filters/view/TopoFilterPanel.java A src/main/java/org/cytoscape/filter/internal/filters/view/FilterMainPanel.java A src/main/java/org/cytoscape/filter/internal/filters/view/PassFilterWidestStringComboBoxModel.java A src/main/java/org/cytoscape/filter/internal/filters/NodeInteractionFilter.java A src/main/java/org/cytoscape/filter/internal/filters/util A src/main/java/org/cytoscape/filter/internal/filters/util/WidestStringComboBoxModel.java A src/main/java/org/cytoscape/filter/internal/filters/util/WidestStringProvider.java A src/main/java/org/cytoscape/filter/internal/filters/util/ApplyFilterThread.java A src/main/java/org/cytoscape/filter/internal/filters/util/FilterUtil.java A src/main/java/org/cytoscape/filter/internal/filters/util/VisualPropertyUtil.java A src/main/java/org/cytoscape/filter/internal/filters/util/SelectUtil.java A src/main/java/org/cytoscape/filter/internal/filters/util/WidestStringComboBoxPopupMenuListener.java A src/main/java/org/cytoscape/filter/internal/prefuse A src/main/java/org/cytoscape/filter/internal/prefuse/data A src/main/java/org/cytoscape/filter/internal/prefuse/data/query A src/main/java/org/cytoscape/filter/internal/prefuse/data/query/NumberRangeModel.java A src/main/java/org/cytoscape/filter/internal/prefuse/util A src/main/java/org/cytoscape/filter/internal/prefuse/util/TypeLib.java A src/main/java/org/cytoscape/filter/internal/prefuse/util/ui A src/main/java/org/cytoscape/filter/internal/prefuse/util/ui/JRangeSlider.java A src/main/java/org/cytoscape/filter/internal/prefuse/util/ui/ValuedRangeModel.java A src/main/java/org/cytoscape/filter/internal/quickfind A src/main/java/org/cytoscape/filter/internal/quickfind/view A src/main/java/org/cytoscape/filter/internal/quickfind/view/QuickFindConfigDialog.java A src/main/java/org/cytoscape/filter/internal/quickfind/view/QuickFindPanel.java A src/main/java/org/cytoscape/filter/internal/quickfind/view/package.html A src/main/java/org/cytoscape/filter/internal/quickfind/util A src/main/java/org/cytoscape/filter/internal/quickfind/util/QuickFindImpl.java A src/main/java/org/cytoscape/filter/internal/quickfind/util/CyAttributesUtil.java A src/main/java/org/cytoscape/filter/internal/quickfind/util/QuickFindListener.java A src/main/java/org/cytoscape/filter/internal/quickfind/util/QuickFindFactory.java A src/main/java/org/cytoscape/filter/internal/quickfind/util/TaskMonitorBase.java A src/main/java/org/cytoscape/filter/internal/quickfind/util/IndexType.java A src/main/java/org/cytoscape/filter/internal/quickfind/util/QuickFind.java A src/main/java/org/cytoscape/filter/internal/quickfind/util/package.html A src/main/java/org/cytoscape/filter/internal/quickfind/plugin A src/main/java/org/cytoscape/filter/internal/quickfind/plugin/QuickFindPlugIn.java A src/main/java/org/cytoscape/filter/internal/quickfind/plugin/package.html A src/main/resources A src/main/resources/META-INF A src/main/resources/META-INF/spring AU src/main/resources/META-INF/spring/bundle-context-osgi.xml AU src/main/resources/META-INF/spring/bundle-context.xml A src/main/resources/images AU src/main/resources/images/minus.gif AU src/main/resources/images/properties.png AU src/main/resources/images/delete.png AU src/main/resources/images/plus.gif AU src/main/resources/images/config.png AU src/main/resources/images/filter.png AU src/main/resources/images/rename.png AU src/main/resources/images/add.png AU src/main/resources/images/duplicate.png AU src/main/resources/images/filter-small.png A pom.xml At revision 24638 Found mavenVersion 3.0.3 from file jar:file:/R1/tools/maven/apache-maven-3.0.3/lib/maven-core-3.0.3.jar!/META-INF/maven/org.apache.maven/maven-core/pom.properties No emails were triggered. Parsing POMs [trunk] $ java -cp /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.401.jar:/R1/tools/maven/apache-maven-3.0.3/boot/plexus-classworlds-2.4.jar org.jvnet.hudson.maven3.agent.Maven3Main /R1/tools/maven/apache-maven-3.0.3 /R1/resources/webservers/tomcat_2/webapps/jenkins/WEB-INF/lib/remoting-1.401.jar /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.401.jar 52919 <===[HUDSON REMOTING CAPACITY]===> channel started Executing Maven: -B -f <http://cytoscape.wodaklab.org/hudson/job/Cy%20Filter%20Impl/ws/trunk/pom.xml> deploy [INFO] Scanning for projects... [WARNING] [WARNING] Some problems were encountered while building the effective model for org.cytoscape:filter-impl:bundle:3.0.0-alpha2-SNAPSHOT [WARNING] 'dependencies.dependency.(groupId:artifactId:type:classifier)' must be unique: org.cytoscape:model-api:jar -> duplicate declaration of version 3.0.0-alpha3-SNAPSHOT @ line 66, column 21 [WARNING] [WARNING] It is highly recommended to fix these problems because they threaten the stability of your build. [WARNING] [WARNING] For this reason, future Maven versions might no longer support building such malformed projects. [WARNING] [INFO] [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.filter-impl [org.cytoscape.filter] 3.0.0-alpha2-SNAPSHOT [INFO] ------------------------------------------------------------------------ [INFO] [INFO] --- maven-resources-plugin:2.5:resources (default-resources) @ filter-impl --- [debug] execute contextualize [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 12 resources [INFO] [INFO] --- maven-pax-plugin:1.5-SNAPSHOT:compile (default-compile) @ filter-impl --- [INFO] Compiling 59 source files to <http://cytoscape.wodaklab.org/hudson/job/Cy%20Filter%20Impl/ws/trunk/target/classes> [INFO] [recovering meta-data] mojoFailed org.ops4j:maven-pax-plugin:1.5-SNAPSHOT(default-compile) projectFailed org.cytoscape:filter-impl:3.0.0-alpha2-SNAPSHOT [JENKINS] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy%20Filter%20Impl/ws/trunk/pom.xml> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy Filter Impl/modules/org.cytoscape$filter-impl/builds/2011-03-30_23-00-36/archive/org.cytoscape/filter-impl/3.0.0-alpha2-SNAPSHOT/pom.xml sessionEnded [INFO] ------------------------------------------------------------------------ [INFO] BUILD FAILURE [INFO] ------------------------------------------------------------------------ [INFO] Total time: 4.730s [INFO] Finished at: Wed Mar 30 23:00:44 EDT 2011 [INFO] Final Memory: 23M/223M [INFO] ------------------------------------------------------------------------ mavenExecutionResult exceptions not empty org.apache.maven.lifecycle.LifecycleExecutionException: Failed to execute goal org.ops4j:maven-pax-plugin:1.5-SNAPSHOT:compile (default-compile) on project filter-impl: Compilation failure at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:213) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:153) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:145) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:84) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:59) at org.apache.maven.lifecycle.internal.LifecycleStarter.singleThreadedBuild(LifecycleStarter.java:183) at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:161) at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:319) at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:156) at org.jvnet.hudson.maven3.launcher.Maven3Launcher.main(Maven3Launcher.java:79) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:597) at org.codehaus.plexus.classworlds.launcher.Launcher.launchStandard(Launcher.java:329) at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:239) at org.jvnet.hudson.maven3.agent.Maven3Main.launch(Maven3Main.java:146) at hudson.maven.Maven3Builder.call(Maven3Builder.java:124) at hudson.maven.Maven3Builder.call(Maven3Builder.java:71) at hudson.remoting.UserRequest.perform(UserRequest.java:114) at hudson.remoting.UserRequest.perform(UserRequest.java:48) at hudson.remoting.Request$2.run(Request.java:270) at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:441) at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303) at java.util.concurrent.FutureTask.run(FutureTask.java:138) at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908) at java.lang.Thread.run(Thread.java:619) Caused by: org.apache.maven.plugin.CompilationFailureException: Compilation failure at org.apache.maven.plugin.AbstractCompilerMojo.execute(AbstractCompilerMojo.java:516) at org.apache.maven.plugin.CompilerMojo.execute(CompilerMojo.java:114) at org.ops4j.pax.construct.lifecycle.BundleCompilerMojo.execute(BundleCompilerMojo.java:74) at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:101) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:209) ... 27 more Sending e-mails to: [email protected] [email protected] channel stopped Skipping sonar analysis due to SCM build trigger -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. 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