See <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Web%20Service%20Client%20BioMart/239/>
------------------------------------------ Started by upstream project "Cy3 Web Service API" build number 213 Checking out http://chianti.ucsd.edu/svn/core3/webservice-biomart-client-impl/trunk A osgi.bnd A src A src/test A src/test/java A src/test/java/optional A src/main A src/main/java A src/main/java/org A src/main/java/org/cytoscape A src/main/java/org/cytoscape/io A src/main/java/org/cytoscape/io/webservice A src/main/java/org/cytoscape/io/webservice/biomart A src/main/java/org/cytoscape/io/webservice/biomart/event A src/main/java/org/cytoscape/io/webservice/biomart/event/RegistoryImportedEvent.java A src/main/java/org/cytoscape/io/webservice/biomart/task A src/main/java/org/cytoscape/io/webservice/biomart/task/ShowBiomartDialogTask.java A src/main/java/org/cytoscape/io/webservice/biomart/task/ShowBiomartGUIAction.java A src/main/java/org/cytoscape/io/webservice/biomart/task/LoadRepositoryTask.java A src/main/java/org/cytoscape/io/webservice/biomart/task/ImportFilterTask.java A src/main/java/org/cytoscape/io/webservice/biomart/task/ImportAttributeListTaskFactory.java A src/main/java/org/cytoscape/io/webservice/biomart/task/ImportTableTask.java A src/main/java/org/cytoscape/io/webservice/biomart/task/BioMartTaskFactory.java A src/main/java/org/cytoscape/io/webservice/biomart/task/ImportFilterTaskFactory.java A src/main/java/org/cytoscape/io/webservice/biomart/task/ImportAttributeListTask.java A src/main/java/org/cytoscape/io/webservice/biomart/task/LoadRepositoryResult.java A src/main/java/org/cytoscape/io/webservice/biomart/BiomartQuery.java A src/main/java/org/cytoscape/io/webservice/biomart/BiomartClient.java A src/main/java/org/cytoscape/io/webservice/biomart/rest A src/main/java/org/cytoscape/io/webservice/biomart/rest/Attribute.java A src/main/java/org/cytoscape/io/webservice/biomart/rest/Dataset.java A src/main/java/org/cytoscape/io/webservice/biomart/rest/Filter.java A src/main/java/org/cytoscape/io/webservice/biomart/rest/BiomartRestClient.java A src/main/java/org/cytoscape/io/webservice/biomart/rest/QueryBuilderUtil.java A src/main/java/org/cytoscape/io/webservice/biomart/rest/XMLQueryBuilder.java A src/main/java/org/cytoscape/io/webservice/biomart/ui A src/main/java/org/cytoscape/io/webservice/biomart/ui/BiomartMainDialog.java A src/main/java/org/cytoscape/io/webservice/biomart/ui/BiomartAttrMappingPanel.java A src/main/java/org/cytoscape/io/webservice/biomart/ui/CheckBoxJList.java A src/main/java/org/cytoscape/io/webservice/biomart/ui/AttributeImportPanel.java A src/main/resources A src/main/resources/META-INF A src/main/resources/META-INF/spring A src/main/resources/META-INF/spring/bundle-context-osgi.xml A src/main/resources/META-INF/spring/bundle-context.xml A src/main/resources/settings AU src/main/resources/settings/tax_report.txt A src/main/resources/settings/filterconversion.txt A src/main/resources/settings/databaselist.txt A src/main/resources/images AU src/main/resources/images/logo_biomart2.png A pom.xml At revision 24638 no change for http://chianti.ucsd.edu/svn/core3/webservice-biomart-client-impl/trunk since the previous build Found mavenVersion 3.0.3 from file jar:file:/R1/tools/maven/apache-maven-3.0.3/lib/maven-core-3.0.3.jar!/META-INF/maven/org.apache.maven/maven-core/pom.properties No emails were triggered. Parsing POMs [trunk] $ java -cp /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.401.jar:/R1/tools/maven/apache-maven-3.0.3/boot/plexus-classworlds-2.4.jar org.jvnet.hudson.maven3.agent.Maven3Main /R1/tools/maven/apache-maven-3.0.3 /R1/resources/webservers/tomcat_2/webapps/jenkins/WEB-INF/lib/remoting-1.401.jar /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.401.jar 38851 <===[HUDSON REMOTING CAPACITY]===> channel started Executing Maven: -B -f <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Web%20Service%20Client%20BioMart/ws/trunk/pom.xml> deploy [INFO] Scanning for projects... [WARNING] [WARNING] Some problems were encountered while building the effective model for org.cytoscape:webservice-biomart-client-impl:bundle:3.0.0-alpha2-SNAPSHOT [WARNING] 'build.plugins.plugin.(groupId:artifactId)' must be unique but found duplicate declaration of plugin org.apache.maven.plugins:maven-jar-plugin @ line 58, column 12 [WARNING] [WARNING] It is highly recommended to fix these problems because they threaten the stability of your build. [WARNING] [WARNING] For this reason, future Maven versions might no longer support building such malformed projects. [WARNING] [INFO] [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.io.webservice-biomart-client-impl [org.cytoscape.io.webservice.biomart] 3.0.0-alpha2-SNAPSHOT [INFO] ------------------------------------------------------------------------ [INFO] [INFO] --- maven-resources-plugin:2.5:resources (default-resources) @ webservice-biomart-client-impl --- [debug] execute contextualize [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 6 resources [INFO] [INFO] --- maven-pax-plugin:1.5-SNAPSHOT:compile (default-compile) @ webservice-biomart-client-impl --- [INFO] Compiling 23 source files to <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Web%20Service%20Client%20BioMart/ws/trunk/target/classes> [INFO] [recovering meta-data] mojoFailed org.ops4j:maven-pax-plugin:1.5-SNAPSHOT(default-compile) projectFailed org.cytoscape:webservice-biomart-client-impl:3.0.0-alpha2-SNAPSHOT [JENKINS] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Web%20Service%20Client%20BioMart/ws/trunk/pom.xml> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Web Service Client BioMart/modules/org.cytoscape$webservice-biomart-client-impl/builds/2011-03-30_23-24-15/archive/org.cytoscape/webservice-biomart-client-impl/3.0.0-alpha2-SNAPSHOT/pom.xml sessionEnded [INFO] ------------------------------------------------------------------------ [INFO] BUILD FAILURE [INFO] ------------------------------------------------------------------------ [INFO] Total time: 3.771s [INFO] Finished at: Wed Mar 30 23:24:22 EDT 2011 [INFO] Final Memory: 18M/221M [INFO] ------------------------------------------------------------------------ maven builder waiting mavenExecutionResult exceptions not empty org.apache.maven.lifecycle.LifecycleExecutionException: Failed to execute goal org.ops4j:maven-pax-plugin:1.5-SNAPSHOT:compile (default-compile) on project webservice-biomart-client-impl: Compilation failure at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:213) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:153) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:145) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:84) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:59) at org.apache.maven.lifecycle.internal.LifecycleStarter.singleThreadedBuild(LifecycleStarter.java:183) at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:161) at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:319) at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:156) at org.jvnet.hudson.maven3.launcher.Maven3Launcher.main(Maven3Launcher.java:79) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:597) at org.codehaus.plexus.classworlds.launcher.Launcher.launchStandard(Launcher.java:329) at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:239) at org.jvnet.hudson.maven3.agent.Maven3Main.launch(Maven3Main.java:146) at hudson.maven.Maven3Builder.call(Maven3Builder.java:124) at hudson.maven.Maven3Builder.call(Maven3Builder.java:71) at hudson.remoting.UserRequest.perform(UserRequest.java:114) at hudson.remoting.UserRequest.perform(UserRequest.java:48) at hudson.remoting.Request$2.run(Request.java:270) at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:441) at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303) at java.util.concurrent.FutureTask.run(FutureTask.java:138) at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908) at java.lang.Thread.run(Thread.java:619) Caused by: org.apache.maven.plugin.CompilationFailureException: Compilation failure at org.apache.maven.plugin.AbstractCompilerMojo.execute(AbstractCompilerMojo.java:516) at org.apache.maven.plugin.CompilerMojo.execute(CompilerMojo.java:114) at org.ops4j.pax.construct.lifecycle.BundleCompilerMojo.execute(BundleCompilerMojo.java:74) at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:101) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:209) ... 27 more Sending e-mails to: [email protected] channel stopped Skipping sonar analysis due to snapshot dependency build trigger -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/cytoscape-cvs?hl=en.
