See <http://cytoscape.wodaklab.org/hudson/job/Cy3%20cpath2-impl/1/>
------------------------------------------
[...truncated 25 lines...]
AU src/main/java/org/cytoscape/cpath2/internal/http/HTTPWriter.java
AU
src/main/java/org/cytoscape/cpath2/internal/http/HTTPConnectionHandler.java
A src/main/java/org/cytoscape/cpath2/internal/task
AU
src/main/java/org/cytoscape/cpath2/internal/task/ExecutePhysicalEntitySearch.java
AU
src/main/java/org/cytoscape/cpath2/internal/task/LoadNetworkFromUrlTask.java
AU src/main/java/org/cytoscape/cpath2/internal/task/TestFoo.java
AU
src/main/java/org/cytoscape/cpath2/internal/task/ExecuteGetRecordByCPathIdTaskFactory.java
AU
src/main/java/org/cytoscape/cpath2/internal/task/MergeNetworkTaskFactory.java
AU
src/main/java/org/cytoscape/cpath2/internal/task/GetParentInteractionsTaskFactory.java
AU
src/main/java/org/cytoscape/cpath2/internal/task/ExecuteGetRecordByCPathId.java
AU
src/main/java/org/cytoscape/cpath2/internal/task/SelectPhysicalEntity.java
AU
src/main/java/org/cytoscape/cpath2/internal/task/LoadNetworkFromUrlTaskFactory.java
AU
src/main/java/org/cytoscape/cpath2/internal/task/GetParentInteractions.java
AU src/main/java/org/cytoscape/cpath2/internal/task/MergeNetworkTask.java
AU
src/main/java/org/cytoscape/cpath2/internal/task/ExecutePhysicalEntitySearchTaskFactory.java
AU
src/main/java/org/cytoscape/cpath2/internal/CPathNetworkImportTask.java
AU
src/main/java/org/cytoscape/cpath2/internal/ViewNetworkNeighborhoodTaskFactory.java
AU src/main/java/org/cytoscape/cpath2/internal/CPathSearchTask.java
A src/main/java/org/cytoscape/cpath2/internal/filters
AU
src/main/java/org/cytoscape/cpath2/internal/filters/DataSourceFilter.java
AU src/main/java/org/cytoscape/cpath2/internal/filters/ChainedFilter.java
AU
src/main/java/org/cytoscape/cpath2/internal/filters/EntityTypeFilter.java
AU src/main/java/org/cytoscape/cpath2/internal/filters/Filter.java
AU src/main/java/org/cytoscape/cpath2/internal/CPath2Factory.java
A src/main/java/org/cytoscape/cpath2/internal/cytoscape
AU
src/main/java/org/cytoscape/cpath2/internal/cytoscape/MergeNetworkEdit.java
AU
src/main/java/org/cytoscape/cpath2/internal/cytoscape/BinarySifVisualStyleUtil.java
A src/main/java/org/cytoscape/cpath2/internal/view
AU
src/main/java/org/cytoscape/cpath2/internal/view/PhysicalEntityDetailsPanel.java
AU src/main/java/org/cytoscape/cpath2/internal/view/CollapsablePanel.java
AU src/main/java/org/cytoscape/cpath2/internal/view/TabUi.java
AU src/main/java/org/cytoscape/cpath2/internal/view/PulsatingBorder.java
AU src/main/java/org/cytoscape/cpath2/internal/view/cPathSearchPanel.java
AU src/main/java/org/cytoscape/cpath2/internal/view/GuiUtils.java
AU src/main/java/org/cytoscape/cpath2/internal/view/GradientHeader.java
AU src/main/java/org/cytoscape/cpath2/internal/view/ModalPanel.java
AU src/main/java/org/cytoscape/cpath2/internal/view/SearchHitsPanel.java
AU src/main/java/org/cytoscape/cpath2/internal/view/DownloadDetails.java
AU src/main/java/org/cytoscape/cpath2/internal/view/MergePanel.java
AU
src/main/java/org/cytoscape/cpath2/internal/view/JListWithToolTips.java
A src/main/java/org/cytoscape/cpath2/internal/view/tree
AU src/main/java/org/cytoscape/cpath2/internal/view/tree/CheckNode.java
AU src/main/java/org/cytoscape/cpath2/internal/view/tree/TreeDemo.java
AU
src/main/java/org/cytoscape/cpath2/internal/view/tree/CheckNodeRenderer.java
AU
src/main/java/org/cytoscape/cpath2/internal/view/tree/JTreeWithCheckNodes.java
A src/main/java/org/cytoscape/cpath2/internal/view/model
AU src/main/java/org/cytoscape/cpath2/internal/view/model/Organism.java
AU
src/main/java/org/cytoscape/cpath2/internal/view/model/ExtendedRecordWrapper.java
AU
src/main/java/org/cytoscape/cpath2/internal/view/model/PathwayTableModel.java
AU
src/main/java/org/cytoscape/cpath2/internal/view/model/InteractionBundleModel.java
AU
src/main/java/org/cytoscape/cpath2/internal/view/model/NetworkWrapper.java
AU src/main/java/org/cytoscape/cpath2/internal/view/model/RecordList.java
AU src/main/java/org/cytoscape/cpath2/internal/view/CategoryCount.java
AU
src/main/java/org/cytoscape/cpath2/internal/view/InteractionBundlePanel.java
AU
src/main/java/org/cytoscape/cpath2/internal/view/SearchDetailsPanel.java
AU src/main/java/org/cytoscape/cpath2/internal/view/SearchBoxPanel.java
A src/main/java/org/cytoscape/cpath2/internal/driver
AU src/main/java/org/cytoscape/cpath2/internal/driver/index.html
AU src/main/java/org/cytoscape/cpath2/internal/driver/Driver.java
A src/main/java/org/cytoscape/cpath2/internal/mapping
AU
src/main/java/org/cytoscape/cpath2/internal/mapping/MapCPathToCytoscape.java
A src/main/java/org/cytoscape/cpath2/internal/util
AU
src/main/java/org/cytoscape/cpath2/internal/util/BioPaxEntityTypeMap.java
AU src/main/java/org/cytoscape/cpath2/internal/util/AttributeUtil.java
AU src/main/java/org/cytoscape/cpath2/internal/util/NetworkGroupUtil.java
AU src/main/java/org/cytoscape/cpath2/internal/util/NullTaskMonitor.java
AU src/main/java/org/cytoscape/cpath2/internal/util/NetworkMergeUtil.java
AU src/main/java/org/cytoscape/cpath2/internal/util/NetworkUtil.java
AU src/main/java/org/cytoscape/cpath2/internal/util/SelectUtil.java
A src/main/java/org/cytoscape/cpath2/internal/web_service
AU
src/main/java/org/cytoscape/cpath2/internal/web_service/CPathWebServiceImpl.java
AU
src/main/java/org/cytoscape/cpath2/internal/web_service/CPathProtocol.java
AU
src/main/java/org/cytoscape/cpath2/internal/web_service/CPathWebServiceListener.java
AU
src/main/java/org/cytoscape/cpath2/internal/web_service/CPathResponseFormat.java
AU
src/main/java/org/cytoscape/cpath2/internal/web_service/CytoscapeCPathWebService.java
AU
src/main/java/org/cytoscape/cpath2/internal/web_service/EmptySetException.java
AU
src/main/java/org/cytoscape/cpath2/internal/web_service/CPathProperties.java
AU
src/main/java/org/cytoscape/cpath2/internal/web_service/CPathException.java
AU
src/main/java/org/cytoscape/cpath2/internal/web_service/CPathWebService.java
A src/main/java/org/cytoscape/cpath2/internal/plugin
AU src/main/java/org/cytoscape/cpath2/internal/plugin/CPathPlugIn2.java
A src/main/resources
A src/main/resources/META-INF
A src/main/resources/META-INF/spring
AU src/main/resources/META-INF/spring/bundle-context-osgi.xml
AU src/main/resources/META-INF/spring/bundle-context.xml
A src/main/resources/org
A src/main/resources/org/cytoscape
A src/main/resources/org/cytoscape/cpath2
A src/main/resources/org/cytoscape/cpath2/internal
A src/main/resources/org/cytoscape/cpath2/internal/view
A src/main/resources/org/cytoscape/cpath2/internal/view/resources
AU
src/main/resources/org/cytoscape/cpath2/internal/view/resources/arrow_collapsed.gif
AU
src/main/resources/org/cytoscape/cpath2/internal/view/resources/stock_autofilter.png
AU src/main/resources/org/cytoscape/cpath2/internal/view/resources/pc.png
AU
src/main/resources/org/cytoscape/cpath2/internal/view/resources/run_tool.gif
AU
src/main/resources/org/cytoscape/cpath2/internal/view/resources/arrow_expanded.gif
AU
src/main/resources/org/cytoscape/cpath2/internal/view/resources/stock_toggle-graphics-16.png
AU
src/main/resources/org/cytoscape/cpath2/internal/view/resources/question.png
AU
src/main/resources/org/cytoscape/cpath2/internal/view/resources/stock_zoom-16.png
A src/main/resources/org/cytoscape/cpath2/internal/plugin
A src/main/resources/org/cytoscape/cpath2/internal/plugin/plugin.props
A src/main/resources/xsd
AU src/main/resources/xsd/SearchResponse.xsd
AU src/main/resources/xsd/RecordBase.xsd
AU src/main/resources/xsd/SummaryResponse.xsd
AU pom.xml
At revision 24722
Found mavenVersion 3.0.3 from file
jar:file:/R1/tools/maven/apache-maven-3.0.3/lib/maven-core-3.0.3.jar!/META-INF/maven/org.apache.maven/maven-core/pom.properties
No emails were triggered.
Parsing POMs
Discovered a new module org.cytoscape:cpath2-impl org.cytoscape.cpath2-impl
[org.cytoscape.cpath2]
[trunk] $ java -cp
/R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.401.jar:/R1/tools/maven/apache-maven-3.0.3/boot/plexus-classworlds-2.4.jar
org.jvnet.hudson.maven3.agent.Maven3Main /R1/tools/maven/apache-maven-3.0.3
/R1/resources/webservers/tomcat_2/webapps/jenkins/WEB-INF/lib/remoting-1.401.jar
/R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.401.jar
46668
<===[HUDSON REMOTING CAPACITY]===> channel started
Executing Maven: -B -f
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20cpath2-impl/ws/trunk/pom.xml>
deploy
[INFO] Scanning for projects...
[WARNING]
[WARNING] Some problems were encountered while building the effective model for
org.cytoscape:cpath2-impl:bundle:1.0-SNAPSHOT
[WARNING] 'build.plugins.plugin.version' for
org.apache.maven.plugins:maven-javadoc-plugin is missing. @
org.cytoscape:parent:3.0.0-alpha3,
/home/bturner/.m2/repository/org/cytoscape/parent/3.0.0-alpha3/parent-3.0.0-alpha3.pom,
line 57, column 12
[WARNING] 'build.plugins.plugin.version' for
org.apache.maven.plugins:maven-compiler-plugin is missing. @
org.cytoscape:parent:3.0.0-alpha3,
/home/bturner/.m2/repository/org/cytoscape/parent/3.0.0-alpha3/parent-3.0.0-alpha3.pom,
line 38, column 12
[WARNING] 'build.plugins.plugin.version' for
org.jvnet.jaxb2.maven2:maven-jaxb2-plugin is missing. @ line 121, column 12
[WARNING] 'build.plugins.plugin.version' for
org.apache.maven.plugins:maven-source-plugin is missing. @
org.cytoscape:parent:3.0.0-alpha3,
/home/bturner/.m2/repository/org/cytoscape/parent/3.0.0-alpha3/parent-3.0.0-alpha3.pom,
line 82, column 12
[WARNING] The expression ${pom.version} is deprecated. Please use
${project.version} instead.
[WARNING] 'reporting.plugins.plugin.version' for
org.apache.maven.plugins:maven-pmd-plugin is missing. @
org.cytoscape:parent:3.0.0-alpha3,
/home/bturner/.m2/repository/org/cytoscape/parent/3.0.0-alpha3/parent-3.0.0-alpha3.pom,
line 262, column 12
[WARNING] 'reporting.plugins.plugin.version' for
org.codehaus.mojo:cobertura-maven-plugin is missing. @
org.cytoscape:parent:3.0.0-alpha3,
/home/bturner/.m2/repository/org/cytoscape/parent/3.0.0-alpha3/parent-3.0.0-alpha3.pom,
line 276, column 12
[WARNING] 'reporting.plugins.plugin.version' for
org.codehaus.mojo:jdepend-maven-plugin is missing. @
org.cytoscape:parent:3.0.0-alpha3,
/home/bturner/.m2/repository/org/cytoscape/parent/3.0.0-alpha3/parent-3.0.0-alpha3.pom,
line 287, column 12
[WARNING] 'reporting.plugins.plugin.version' for
org.apache.maven.plugins:maven-javadoc-plugin is missing. @
org.cytoscape:parent:3.0.0-alpha3,
/home/bturner/.m2/repository/org/cytoscape/parent/3.0.0-alpha3/parent-3.0.0-alpha3.pom,
line 291, column 12
[WARNING] 'reporting.plugins.plugin.version' for
org.codehaus.mojo:jxr-maven-plugin is missing. @
org.cytoscape:parent:3.0.0-alpha3,
/home/bturner/.m2/repository/org/cytoscape/parent/3.0.0-alpha3/parent-3.0.0-alpha3.pom,
line 305, column 12
[WARNING] 'reporting.plugins.plugin.version' for
org.apache.maven.plugins:maven-surefire-plugin is missing. @
org.cytoscape:parent:3.0.0-alpha3,
/home/bturner/.m2/repository/org/cytoscape/parent/3.0.0-alpha3/parent-3.0.0-alpha3.pom,
line 309, column 12
[WARNING] 'reporting.plugins.plugin.version' for
org.apache.maven.plugins:maven-surefire-report-plugin is missing. @
org.cytoscape:parent:3.0.0-alpha3,
/home/bturner/.m2/repository/org/cytoscape/parent/3.0.0-alpha3/parent-3.0.0-alpha3.pom,
line 317, column 12
[WARNING] 'pluginRepositories.pluginRepository.layout' for
maven-repository.dev.java.net uses the unsupported value 'legacy', artifact
resolution might fail. @ org.cytoscape:parent:3.0.0-alpha3,
/home/bturner/.m2/repository/org/cytoscape/parent/3.0.0-alpha3/parent-3.0.0-alpha3.pom,
line 236, column 12
[WARNING]
[WARNING] It is highly recommended to fix these problems because they threaten
the stability of your build.
[WARNING]
[WARNING] For this reason, future Maven versions might no longer support
building such malformed projects.
[WARNING]
[INFO]
Downloading:
http://repo1.maven.org/maven2/org/apache/maven/plugins/maven-compiler-plugin/maven-metadata.xml
[INFO] ------------------------------------------------------------------------
[INFO] Building org.cytoscape.cpath2-impl
[org.cytoscape.cpath2] 1.0-SNAPSHOT
[INFO] ------------------------------------------------------------------------
Downloading:
http://download.java.net/maven/2/org/apache/maven/plugins/maven-compiler-plugin/maven-metadata.xml
Downloaded:
http://repo1.maven.org/maven2/org/apache/maven/plugins/maven-compiler-plugin/maven-metadata.xml
(597 B at 0.5 KB/sec)
[WARNING] Could not transfer metadata
org.apache.maven.plugins:maven-compiler-plugin/maven-metadata.xml from/to
maven-repository.dev.java.net (http://download.java.net/maven/1): No connector
available to access repository maven-repository.dev.java.net
(http://download.java.net/maven/1) of type legacy using the available factories
WagonRepositoryConnectorFactory
Downloading:
http://repo1.maven.org/maven2/org/apache/maven/plugins/maven-javadoc-plugin/maven-metadata.xml
Downloading:
http://download.java.net/maven/2/org/apache/maven/plugins/maven-javadoc-plugin/maven-metadata.xml
Downloaded:
http://repo1.maven.org/maven2/org/apache/maven/plugins/maven-javadoc-plugin/maven-metadata.xml
(658 B at 0.7 KB/sec)
[WARNING] Could not transfer metadata
org.apache.maven.plugins:maven-javadoc-plugin/maven-metadata.xml from/to
maven-repository.dev.java.net (http://download.java.net/maven/1): No connector
available to access repository maven-repository.dev.java.net
(http://download.java.net/maven/1) of type legacy using the available factories
WagonRepositoryConnectorFactory
Downloading:
http://repo1.maven.org/maven2/org/apache/maven/plugins/maven-source-plugin/maven-metadata.xml
Downloading:
http://download.java.net/maven/2/org/apache/maven/plugins/maven-source-plugin/maven-metadata.xml
Downloaded:
http://repo1.maven.org/maven2/org/apache/maven/plugins/maven-source-plugin/maven-metadata.xml
(632 B at 0.6 KB/sec)
[WARNING] Could not transfer metadata
org.apache.maven.plugins:maven-source-plugin/maven-metadata.xml from/to
maven-repository.dev.java.net (http://download.java.net/maven/1): No connector
available to access repository maven-repository.dev.java.net
(http://download.java.net/maven/1) of type legacy using the available factories
WagonRepositoryConnectorFactory
Downloading:
http://repo1.maven.org/maven2/org/jvnet/jaxb2/maven2/maven-jaxb2-plugin/maven-metadata.xml
Downloading:
http://download.java.net/maven/2/org/jvnet/jaxb2/maven2/maven-jaxb2-plugin/maven-metadata.xml
Downloaded:
http://download.java.net/maven/2/org/jvnet/jaxb2/maven2/maven-jaxb2-plugin/maven-metadata.xml
(801 B at 5.4 KB/sec)
Downloaded:
http://repo1.maven.org/maven2/org/jvnet/jaxb2/maven2/maven-jaxb2-plugin/maven-metadata.xml
(378 B at 0.4 KB/sec)
[WARNING] Could not transfer metadata
org.jvnet.jaxb2.maven2:maven-jaxb2-plugin/maven-metadata.xml from/to
maven-repository.dev.java.net (http://download.java.net/maven/1): No connector
available to access repository maven-repository.dev.java.net
(http://download.java.net/maven/1) of type legacy using the available factories
WagonRepositoryConnectorFactory
Downloading:
http://download.java.net/maven/2/org/jvnet/jaxb2/maven2/maven-jaxb2-plugin/0.7.5/maven-jaxb2-plugin-0.7.5.pom
Downloading:
http://repo1.maven.org/maven2/org/jvnet/jaxb2/maven2/maven-jaxb2-plugin/0.7.5/maven-jaxb2-plugin-0.7.5.pom
Downloaded:
http://repo1.maven.org/maven2/org/jvnet/jaxb2/maven2/maven-jaxb2-plugin/0.7.5/maven-jaxb2-plugin-0.7.5.pom
(3 KB at 2.4 KB/sec)
Downloading:
http://download.java.net/maven/2/org/jvnet/jaxb2/maven2/maven-jaxb2-plugin-project/0.7.5/maven-jaxb2-plugin-project-0.7.5.pom
Downloading:
http://repo1.maven.org/maven2/org/jvnet/jaxb2/maven2/maven-jaxb2-plugin-project/0.7.5/maven-jaxb2-plugin-project-0.7.5.pom
Downloaded:
http://repo1.maven.org/maven2/org/jvnet/jaxb2/maven2/maven-jaxb2-plugin-project/0.7.5/maven-jaxb2-plugin-project-0.7.5.pom
(8 KB at 7.3 KB/sec)
Downloading:
http://download.java.net/maven/2/org/sonatype/oss/oss-parent/6/oss-parent-6.pom
Downloading:
http://repo1.maven.org/maven2/org/sonatype/oss/oss-parent/6/oss-parent-6.pom
Downloaded:
http://repo1.maven.org/maven2/org/sonatype/oss/oss-parent/6/oss-parent-6.pom (5
KB at 5.3 KB/sec)
Downloading:
http://download.java.net/maven/2/org/jvnet/jaxb2/maven2/maven-jaxb2-plugin/0.7.5/maven-jaxb2-plugin-0.7.5.jar
Downloading:
http://repo1.maven.org/maven2/org/jvnet/jaxb2/maven2/maven-jaxb2-plugin/0.7.5/maven-jaxb2-plugin-0.7.5.jar
Downloaded:
http://repo1.maven.org/maven2/org/jvnet/jaxb2/maven2/maven-jaxb2-plugin/0.7.5/maven-jaxb2-plugin-0.7.5.jar
(9 KB at 10.8 KB/sec)
[WARNING] Could not transfer metadata
org.apache.maven.plugins:maven-install-plugin/maven-metadata.xml from/to
maven-repository.dev.java.net (http://download.java.net/maven/1): No connector
available to access repository maven-repository.dev.java.net
(http://download.java.net/maven/1) of type legacy using the available factories
WagonRepositoryConnectorFactory
[WARNING] Could not transfer metadata
org.apache.maven.plugins:maven-resources-plugin/maven-metadata.xml from/to
maven-repository.dev.java.net (http://download.java.net/maven/1): No connector
available to access repository maven-repository.dev.java.net
(http://download.java.net/maven/1) of type legacy using the available factories
WagonRepositoryConnectorFactory
[WARNING] Could not transfer metadata
org.apache.maven.plugins:maven-surefire-plugin/maven-metadata.xml from/to
maven-repository.dev.java.net (http://download.java.net/maven/1): No connector
available to access repository maven-repository.dev.java.net
(http://download.java.net/maven/1) of type legacy using the available factories
WagonRepositoryConnectorFactory
[WARNING] Could not transfer metadata
org.apache.maven.plugins:maven-deploy-plugin/maven-metadata.xml from/to
maven-repository.dev.java.net (http://download.java.net/maven/1): No connector
available to access repository maven-repository.dev.java.net
(http://download.java.net/maven/1) of type legacy using the available factories
WagonRepositoryConnectorFactory
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/org/cytoscape/biopax-impl/1.0-SNAPSHOT/biopax-impl-1.0-SNAPSHOT.pom
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/org/cytoscape/biopax-impl/1.0-SNAPSHOT/biopax-impl-1.0-SNAPSHOT.pom
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi-snapshots/org/cytoscape/biopax-impl/1.0-SNAPSHOT/biopax-impl-1.0-SNAPSHOT.pom
[WARNING] The POM for org.cytoscape:biopax-impl:jar:1.0-SNAPSHOT is missing, no
dependency information available
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/org/cytoscape/biopax-impl/1.0-SNAPSHOT/biopax-impl-1.0-SNAPSHOT.jar
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/org/cytoscape/biopax-impl/1.0-SNAPSHOT/biopax-impl-1.0-SNAPSHOT.jar
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi-snapshots/org/cytoscape/biopax-impl/1.0-SNAPSHOT/biopax-impl-1.0-SNAPSHOT.jar
projectFailed org.cytoscape:cpath2-impl:1.0-SNAPSHOT
[JENKINS] Archiving
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20cpath2-impl/ws/trunk/pom.xml>
to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3
cpath2-impl/modules/org.cytoscape$cpath2-impl/builds/2011-04-08_14-31-26/archive/org.cytoscape/cpath2-impl/1.0-SNAPSHOT/pom.xml
sessionEnded
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 10.582s
[INFO] Finished at: Fri Apr 08 14:31:39 EDT 2011
[INFO] Final Memory: 11M/118M
[INFO] ------------------------------------------------------------------------
mavenExecutionResult exceptions not empty
org.apache.maven.lifecycle.LifecycleExecutionException: Failed to execute goal
on project cpath2-impl: Could not resolve dependencies for project
org.cytoscape:cpath2-impl:bundle:1.0-SNAPSHOT: Could not find artifact
org.cytoscape:biopax-impl:jar:1.0-SNAPSHOT in cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
at
org.apache.maven.lifecycle.internal.LifecycleDependencyResolver.getDependencies(LifecycleDependencyResolver.java:196)
at
org.apache.maven.lifecycle.internal.LifecycleDependencyResolver.resolveProjectDependencies(LifecycleDependencyResolver.java:108)
at
org.apache.maven.lifecycle.internal.MojoExecutor.ensureDependenciesAreResolved(MojoExecutor.java:258)
at
org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:201)
at
org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:153)
at
org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:145)
at
org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:84)
at
org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:59)
at
org.apache.maven.lifecycle.internal.LifecycleStarter.singleThreadedBuild(LifecycleStarter.java:183)
at
org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:161)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:319)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:156)
at
org.jvnet.hudson.maven3.launcher.Maven3Launcher.main(Maven3Launcher.java:79)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at
org.codehaus.plexus.classworlds.launcher.Launcher.launchStandard(Launcher.java:329)
at
org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:239)
at org.jvnet.hudson.maven3.agent.Maven3Main.launch(Maven3Main.java:146)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:124)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:71)
at hudson.remoting.UserRequest.perform(UserRequest.java:114)
at hudson.remoting.UserRequest.perform(UserRequest.java:48)
at hudson.remoting.Request$2.run(Request.java:270)
at
java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:441)
at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303)
at java.util.concurrent.FutureTask.run(FutureTask.java:138)
at
java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886)
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908)
at java.lang.Thread.run(Thread.java:619)
Caused by: org.apache.maven.project.DependencyResolutionException: Could not
resolve dependencies for project org.cytoscape:cpath2-impl:bundle:1.0-SNAPSHOT:
Could not find artifact org.cytoscape:biopax-impl:jar:1.0-SNAPSHOT in
cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
at
org.apache.maven.project.DefaultProjectDependenciesResolver.resolve(DefaultProjectDependenciesResolver.java:170)
at
org.apache.maven.lifecycle.internal.LifecycleDependencyResolver.getDependencies(LifecycleDependencyResolver.java:171)
... 30 more
Caused by: org.sonatype.aether.resolution.DependencyResolutionException: Could
not find artifact org.cytoscape:biopax-impl:jar:1.0-SNAPSHOT in
cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
at
org.sonatype.aether.impl.internal.DefaultRepositorySystem.resolveDependencies(DefaultRepositorySystem.java:412)
at
org.apache.maven.project.DefaultProjectDependenciesResolver.resolve(DefaultProjectDependenciesResolver.java:164)
... 31 more
Caused by: org.sonatype.aether.resolution.ArtifactResolutionException: Could
not find artifact org.cytoscape:biopax-impl:jar:1.0-SNAPSHOT in
cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
at
org.sonatype.aether.impl.internal.DefaultArtifactResolver.resolve(DefaultArtifactResolver.java:541)
at
org.sonatype.aether.impl.internal.DefaultArtifactResolver.resolveArtifacts(DefaultArtifactResolver.java:220)
at
org.sonatype.aether.impl.internal.DefaultRepositorySystem.resolveDependencies(DefaultRepositorySystem.java:395)
... 32 more
Caused by: org.sonatype.aether.transfer.ArtifactNotFoundException: Could not
find artifact org.cytoscape:biopax-impl:jar:1.0-SNAPSHOT in cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
at
org.sonatype.aether.connector.wagon.WagonRepositoryConnector$4.wrap(WagonRepositoryConnector.java:945)
at
org.sonatype.aether.connector.wagon.WagonRepositoryConnector$4.wrap(WagonRepositoryConnector.java:940)
at
org.sonatype.aether.connector.wagon.WagonRepositoryConnector$GetTask.flush(WagonRepositoryConnector.java:695)
at
org.sonatype.aether.connector.wagon.WagonRepositoryConnector$GetTask.flush(WagonRepositoryConnector.java:689)
at
org.sonatype.aether.connector.wagon.WagonRepositoryConnector.get(WagonRepositoryConnector.java:445)
at
org.sonatype.aether.impl.internal.DefaultArtifactResolver.resolve(DefaultArtifactResolver.java:460)
... 34 more
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channel stopped
Skipping sonar analysis due to user build trigger
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