Author: Christian Lopes
Date: 2011-05-02 14:18:47 -0700 (Mon, 02 May 2011)
New Revision: 24890

Modified:
   
cytoscapeweb/trunk/cytoscapeweb/src/org/cytoscapeweb/view/layout/NodeLinkTreeLayout.as
   
cytoscapeweb/trunk/cytoscapeweb/src/org/cytoscapeweb/view/layout/RadialTreeLayout.as
Log:
Fixed bug #2519: Radial and Tree layouts change node opacity

Modified: 
cytoscapeweb/trunk/cytoscapeweb/src/org/cytoscapeweb/view/layout/NodeLinkTreeLayout.as
===================================================================
--- 
cytoscapeweb/trunk/cytoscapeweb/src/org/cytoscapeweb/view/layout/NodeLinkTreeLayout.as
      2011-05-02 20:55:44 UTC (rev 24889)
+++ 
cytoscapeweb/trunk/cytoscapeweb/src/org/cytoscapeweb/view/layout/NodeLinkTreeLayout.as
      2011-05-02 21:18:47 UTC (rev 24890)
@@ -320,11 +320,11 @@
         }
         
         private function setVisibility(n:NodeSprite, o:Object, 
visible:Boolean):void {
-            o.alpha = visible ? 1.0 : 0.0;
+//            o.alpha = visible ? 1.0 : 0.0;
             o.mouseEnabled = visible;
             if (_tree.parentEdge(n) != null) {
                 o = _t.$(_tree.parentEdge(n));
-                o.alpha = visible ? 1.0 : 0.0;
+//                o.alpha = visible ? 1.0 : 0.0;
                 o.mouseEnabled = visible;
             }
 

Modified: 
cytoscapeweb/trunk/cytoscapeweb/src/org/cytoscapeweb/view/layout/RadialTreeLayout.as
===================================================================
--- 
cytoscapeweb/trunk/cytoscapeweb/src/org/cytoscapeweb/view/layout/RadialTreeLayout.as
        2011-05-02 20:55:44 UTC (rev 24889)
+++ 
cytoscapeweb/trunk/cytoscapeweb/src/org/cytoscapeweb/view/layout/RadialTreeLayout.as
        2011-05-02 21:18:47 UTC (rev 24890)
@@ -124,9 +124,9 @@
                         var o:Object = _t.$(n);
                         // collapse to inner radius
                         o.radius = o.h = o.v = radiusIncrement / 2;
-                        o.alpha = 0;
+//                        o.alpha = 0;
                         o.mouseEnabled = false;
-                        if (_tree.parentEdge(n) != null) 
_t.$(_tree.parentEdge(n)).alpha = false;
+//                        if (_tree.parentEdge(n) != null) 
_t.$(_tree.parentEdge(n)).alpha = false;
                     }
                 });
             }
@@ -299,7 +299,7 @@
         }
         
         protected function update(n:NodeSprite, r:Number, a:Number, aw:Number, 
v:Boolean):void {
-            var o:Object = _t.$(n), alpha:Number = v ? 1 : 0;
+            var o:Object = _t.$(n);//, alpha:Number = v ? 1 : 0;
             o.radius = r;
             o.angle = a;
             if (aw == 0) {
@@ -310,9 +310,9 @@
             }
             o.w = aw;
             o.u = a - aw/2;
-            o.alpha = alpha;
+//            o.alpha = alpha;
             o.mouseEnabled = v;
-            if (_tree.parentEdge(n) != null) _t.$(_tree.parentEdge(n)).alpha = 
alpha;
+//            if (_tree.parentEdge(n) != null) _t.$(_tree.parentEdge(n)).alpha 
= alpha;
         }
                 
         protected function params(n:NodeSprite):Params {

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