See <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/502/>
------------------------------------------ [...truncated 10532 lines...] Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/cytoscape/coreplugins/parent/maven-metadata.xml Downloaded: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/cytoscape/coreplugins/parent/maven-metadata.xml (501 B at 37.6 KB/sec) Uploading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/cytoscape/coreplugins/parent/2.8.2-SNAPSHOT/maven-metadata.xml Uploaded: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/cytoscape/coreplugins/parent/2.8.2-SNAPSHOT/maven-metadata.xml (606 B at 1.7 KB/sec) Uploading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/cytoscape/coreplugins/parent/maven-metadata.xml Uploaded: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/cytoscape/coreplugins/parent/maven-metadata.xml (501 B at 0.3 KB/sec) projectSucceeded cytoscape.coreplugins:parent:2.8.2-SNAPSHOT [JENKINS] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/pom.xml> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cytoscape_2.X_application/modules/cytoscape.coreplugins$parent/builds/2011-05-11_20-34-47/archive/cytoscape.coreplugins/parent/2.8.2-SNAPSHOT/pom.xml [INFO] [INFO] ------------------------------------------------------------------------ [INFO] Building Advanced Network Merge 2.8.2-SNAPSHOT [INFO] ------------------------------------------------------------------------ [INFO] [INFO] --- maven-resources-plugin:2.4.3:resources (default-resources) @ advanced-network-merge --- [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 11 resources [INFO] [INFO] --- maven-compiler-plugin:2.3.2:compile (default-compile) @ advanced-network-merge --- [INFO] Compiling 29 source files to <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/classes> [INFO] [INFO] --- maven-resources-plugin:2.4.3:testResources (default-testResources) @ advanced-network-merge --- [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 10 resources [INFO] [INFO] --- maven-compiler-plugin:2.3.2:testCompile (default-testCompile) @ advanced-network-merge --- [INFO] No sources to compile [INFO] [INFO] --- maven-surefire-plugin:2.7.1:test (default-test) @ advanced-network-merge --- [INFO] Surefire report directory: <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/surefire-reports> ------------------------------------------------------- T E S T S ------------------------------------------------------- There are no tests to run. Results : Tests run: 0, Failures: 0, Errors: 0, Skipped: 0 [JENKINS] Recording test results [INFO] [INFO] --- maven-jar-plugin:2.3.1:jar (default-jar) @ advanced-network-merge --- [INFO] Building jar: <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/advanced-network-merge-2.8.2-SNAPSHOT.jar> [INFO] [INFO] --- maven-javadoc-plugin:2.7:jar (attach-javadocs) @ advanced-network-merge --- [WARNING] Are you sure about the <javadocVersion/> parameter? It seems to be 1.6 [INFO] Loading source files for package csplugins.network.merge.model... Loading source files for package csplugins.network.merge.conflict... Loading source files for package csplugins.network.merge.ui... Loading source files for package csplugins.network.merge.util... Loading source files for package csplugins.network.merge... Constructing Javadoc information... Standard Doclet version 1.6.0_20 Building tree for all the packages and classes... Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/model//AttributeMapping.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/model//AttributeMappingImpl.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/model//MatchingAttribute.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/model//MatchingAttributeImpl.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/conflict//AttributeConflictCollector.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/conflict//AttributeConflictCollectorImpl.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/conflict//AttributeConflictCollectorImpl.Conflicts.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/conflict//AttributeConflictHandler.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/conflict//AttributeConflictManager.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/conflict//DefaultAttributeConflictHandler.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/ui//CollapsiblePanel.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/ui//CollapsiblePanel.CollapeListener.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/ui//IDMappingDialog.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/ui//IDTypeSelectionTable.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/ui//NetworkMergeFrame.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/util//AttributeMerger.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/util//AttributeValueCastUtils.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/util//AttributeValueMatcher.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/util//CopyingAttributeValueVisitor.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/util//DefaultAttributeMerger.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/util//DefaultAttributeValueMatcher.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge//AbstractNetworkMerge.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge//AttributeBasedNetworkMerge.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge//NetworkMerge.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge//NetworkMerge.Operation.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge//NetworkMergeParameter.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge//NetworkMergeParameterImpl.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge//NetworkMergePlugin.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/overview-frame.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge//package-frame.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge//package-summary.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge//package-tree.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/conflict//package-frame.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/conflict//package-summary.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/conflict//package-tree.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/model//package-frame.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/model//package-summary.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/model//package-tree.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/ui//package-frame.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/ui//package-summary.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/ui//package-tree.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/util//package-frame.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/util//package-summary.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/util//package-tree.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/constant-values.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/serialized-form.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/model//class-use/AttributeMappingImpl.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/model//class-use/MatchingAttributeImpl.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/model//class-use/AttributeMapping.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/model//class-use/MatchingAttribute.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/conflict//class-use/DefaultAttributeConflictHandler.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/conflict//class-use/AttributeConflictCollectorImpl.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/conflict//class-use/AttributeConflictCollectorImpl.Conflicts.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/conflict//class-use/AttributeConflictManager.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/conflict//class-use/AttributeConflictHandler.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/conflict//class-use/AttributeConflictCollector.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/ui//class-use/NetworkMergeFrame.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/ui//class-use/CollapsiblePanel.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/ui//class-use/CollapsiblePanel.CollapeListener.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/ui//class-use/IDMappingDialog.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/ui//class-use/IDTypeSelectionTable.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/util//class-use/DefaultAttributeMerger.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/util//class-use/DefaultAttributeValueMatcher.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/util//class-use/AttributeValueCastUtils.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/util//class-use/AttributeMerger.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/util//class-use/CopyingAttributeValueVisitor.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/util//class-use/AttributeValueMatcher.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge//class-use/AttributeBasedNetworkMerge.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge//class-use/NetworkMergeParameterImpl.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge//class-use/NetworkMerge.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge//class-use/NetworkMerge.Operation.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge//class-use/AbstractNetworkMerge.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge//class-use/NetworkMergeParameter.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge//class-use/NetworkMergePlugin.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge//package-use.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/conflict//package-use.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/model//package-use.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/ui//package-use.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/csplugins/network/merge/util//package-use.html...> Building index for all the packages and classes... Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/overview-tree.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/index-all.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/deprecated-list.html...> Building index for all classes... Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/allclasses-frame.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/allclasses-noframe.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/index.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/overview-summary.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/help-doc.html...> Generating <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/apidocs/stylesheet.css...> 23 warnings [WARNING] Javadoc Warnings [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/src/main/java/csplugins/network/merge/model/AttributeMappingImpl.java>:582: warning - @inheritDoc used but pack(int) does not override or implement any method. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/src/main/java/csplugins/network/merge/model/AttributeMappingImpl.java>:582: warning - @inheritDoc used but pack(int) does not override or implement any method. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/src/main/java/csplugins/network/merge/model/MatchingAttribute.java>:95: warning - @return tag has no arguments. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/src/main/java/csplugins/network/merge/model/MatchingAttribute.java>:89: warning - @return tag has no arguments. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/src/main/java/csplugins/network/merge/model/MatchingAttribute.java>:83: warning - @return tag has no arguments. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/src/main/java/csplugins/network/merge/conflict/AttributeConflictCollector.java>:76: warning - @return tag has no arguments. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/src/main/java/csplugins/network/merge/conflict/AttributeConflictCollector.java>:103: warning - @return tag has no arguments. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/src/main/java/csplugins/network/merge/conflict/AttributeConflictCollector.java>:93: warning - @return tag has no arguments. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/src/main/java/csplugins/network/merge/conflict/AttributeConflictHandler.java>:57: warning - @param argument "conflict" is not a parameter name. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/src/main/java/csplugins/network/merge/conflict/DefaultAttributeConflictHandler.java>:59: warning - @param argument "conflict" is not a parameter name. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/src/main/java/csplugins/network/merge/util/AttributeValueCastUtils.java>:60: warning - @return tag has no arguments. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/src/main/java/csplugins/network/merge/util/DefaultAttributeMerger.java>:71: warning - @param argument "fromIDs" is not a parameter name. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/src/main/java/csplugins/network/merge/util/DefaultAttributeMerger.java>:71: warning - @param argument "fromAttrName" is not a parameter name. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/src/main/java/csplugins/network/merge/util/DefaultAttributeMerger.java>:71: warning - @param argument "conflictCollector" is not a parameter name. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/src/main/java/csplugins/network/merge/AbstractNetworkMerge.java>:92: warning - @param argument "net1,net2" is not a parameter name. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/src/main/java/csplugins/network/merge/AbstractNetworkMerge.java>:92: warning - @param argument "n1,n2" is not a parameter name. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/src/main/java/csplugins/network/merge/AbstractNetworkMerge.java>:114: warning - @param argument "source," is not a parameter name. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/src/main/java/csplugins/network/merge/AbstractNetworkMerge.java>:125: warning - @param argument "net1,net2" is not a parameter name. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/src/main/java/csplugins/network/merge/AbstractNetworkMerge.java>:125: warning - @param argument "e1,e2" is not a parameter name. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/src/main/java/csplugins/network/merge/AbstractNetworkMerge.java>:362: warning - @param argument "size" is not a parameter name. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/src/main/java/csplugins/network/merge/NetworkMergePlugin.java>:77: warning - @return tag has no arguments. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/src/main/java/csplugins/network/merge/NetworkMergePlugin.java>:77: warning - @return tag cannot be used in method with void return type. [WARNING] <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/src/main/java/csplugins/network/merge/model/AttributeMappingImpl.java>:582: warning - @inheritDoc used but pack(int) does not override or implement any method. [INFO] Building jar: <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/advanced-network-merge-2.8.2-SNAPSHOT-javadoc.jar> mojo forkStarted org.apache.maven.plugins:maven-source-plugin:2.1.2(attach-sources) mojo forkSucceeded org.apache.maven.plugins:maven-source-plugin:2.1.2(attach-sources) ignoring exception during new ExecutedMojo null [INFO] [INFO] --- maven-source-plugin:2.1.2:jar (attach-sources) @ advanced-network-merge --- [INFO] csplugins already added, skipping [INFO] csplugins/network already added, skipping [INFO] csplugins/network/merge already added, skipping [INFO] Building jar: <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/advanced-network-merge-2.8.2-SNAPSHOT-sources.jar> [INFO] csplugins already added, skipping [INFO] csplugins/network already added, skipping [INFO] csplugins/network/merge already added, skipping [INFO] [INFO] --- maven-assembly-plugin:2.2-beta-5:single (make-assembly) @ advanced-network-merge --- [INFO] Building jar: <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/advanced-network-merge-2.8.2-SNAPSHOT-jar-with-dependencies.jar> [INFO] [INFO] Installing <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/advanced-network-merge-2.8.2-SNAPSHOT.jar> to /home/bturner/.m2/repository/cytoscape/coreplugins/advanced-network-merge/2.8.2-SNAPSHOT/advanced-network-merge-2.8.2-SNAPSHOT.jar [INFO] --- maven-install-plugin:2.3.1:install (default-install) @ advanced-network-merge --- [INFO] Installing <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/pom.xml> to /home/bturner/.m2/repository/cytoscape/coreplugins/advanced-network-merge/2.8.2-SNAPSHOT/advanced-network-merge-2.8.2-SNAPSHOT.pom [INFO] Installing <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/advanced-network-merge-2.8.2-SNAPSHOT-javadoc.jar> to /home/bturner/.m2/repository/cytoscape/coreplugins/advanced-network-merge/2.8.2-SNAPSHOT/advanced-network-merge-2.8.2-SNAPSHOT-javadoc.jar [INFO] Installing <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/advanced-network-merge-2.8.2-SNAPSHOT-sources.jar> to /home/bturner/.m2/repository/cytoscape/coreplugins/advanced-network-merge/2.8.2-SNAPSHOT/advanced-network-merge-2.8.2-SNAPSHOT-sources.jar [INFO] Installing <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/advanced-network-merge-2.8.2-SNAPSHOT-jar-with-dependencies.jar> to /home/bturner/.m2/repository/cytoscape/coreplugins/advanced-network-merge/2.8.2-SNAPSHOT/advanced-network-merge-2.8.2-SNAPSHOT-jar-with-dependencies.jar [INFO] [INFO] Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/cytoscape/coreplugins/advanced-network-merge/2.8.2-SNAPSHOT/maven-metadata.xml --- maven-deploy-plugin:2.5:deploy (default-deploy) @ advanced-network-merge --- Downloaded: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/cytoscape/coreplugins/advanced-network-merge/2.8.2-SNAPSHOT/maven-metadata.xml (2 KB at 6.4 KB/sec) Uploading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/cytoscape/coreplugins/advanced-network-merge/2.8.2-SNAPSHOT/advanced-network-merge-2.8.2-20110512.004540-81.jar Uploaded: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/cytoscape/coreplugins/advanced-network-merge/2.8.2-SNAPSHOT/advanced-network-merge-2.8.2-20110512.004540-81.jar (172 KB at 388.3 KB/sec) Uploading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/cytoscape/coreplugins/advanced-network-merge/2.8.2-SNAPSHOT/advanced-network-merge-2.8.2-20110512.004540-81.pom Uploaded: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/cytoscape/coreplugins/advanced-network-merge/2.8.2-SNAPSHOT/advanced-network-merge-2.8.2-20110512.004540-81.pom (2 KB at 4.2 KB/sec) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/cytoscape/coreplugins/advanced-network-merge/maven-metadata.xml Downloaded: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/cytoscape/coreplugins/advanced-network-merge/maven-metadata.xml (455 B at 4.4 KB/sec) Uploading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/cytoscape/coreplugins/advanced-network-merge/2.8.2-SNAPSHOT/maven-metadata.xml Uploaded: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/cytoscape/coreplugins/advanced-network-merge/2.8.2-SNAPSHOT/maven-metadata.xml (2 KB at 8.9 KB/sec) Uploading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/cytoscape/coreplugins/advanced-network-merge/maven-metadata.xml Uploaded: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/cytoscape/coreplugins/advanced-network-merge/maven-metadata.xml (455 B at 3.0 KB/sec) Uploading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/cytoscape/coreplugins/advanced-network-merge/2.8.2-SNAPSHOT/advanced-network-merge-2.8.2-20110512.004540-81-javadoc.jar Uploaded: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/cytoscape/coreplugins/advanced-network-merge/2.8.2-SNAPSHOT/advanced-network-merge-2.8.2-20110512.004540-81-javadoc.jar (210 KB at 39.8 KB/sec) Uploading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/cytoscape/coreplugins/advanced-network-merge/2.8.2-SNAPSHOT/maven-metadata.xml Uploaded: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/cytoscape/coreplugins/advanced-network-merge/2.8.2-SNAPSHOT/maven-metadata.xml (2 KB at 5.8 KB/sec) Uploading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/cytoscape/coreplugins/advanced-network-merge/2.8.2-SNAPSHOT/advanced-network-merge-2.8.2-20110512.004540-81-sources.jar Uploaded: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/cytoscape/coreplugins/advanced-network-merge/2.8.2-SNAPSHOT/advanced-network-merge-2.8.2-20110512.004540-81-sources.jar (137 KB at 213.0 KB/sec) Uploading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/cytoscape/coreplugins/advanced-network-merge/2.8.2-SNAPSHOT/maven-metadata.xml Uploaded: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/cytoscape/coreplugins/advanced-network-merge/2.8.2-SNAPSHOT/maven-metadata.xml (2 KB at 8.7 KB/sec) Uploading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/cytoscape/coreplugins/advanced-network-merge/2.8.2-SNAPSHOT/advanced-network-merge-2.8.2-20110512.004540-81-jar-with-dependencies.jar Uploaded: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/cytoscape/coreplugins/advanced-network-merge/2.8.2-SNAPSHOT/advanced-network-merge-2.8.2-20110512.004540-81-jar-with-dependencies.jar (180 KB at 239.0 KB/sec) Uploading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/cytoscape/coreplugins/advanced-network-merge/2.8.2-SNAPSHOT/maven-metadata.xml Uploaded: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/cytoscape/coreplugins/advanced-network-merge/2.8.2-SNAPSHOT/maven-metadata.xml (2 KB at 12.5 KB/sec) projectSucceeded cytoscape.coreplugins:advanced-network-merge:2.8.2-SNAPSHOT [JENKINS] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/pom.xml> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cytoscape_2.X_application/modules/cytoscape.coreplugins$advanced-network-merge/builds/2011-05-11_20-34-47/archive/cytoscape.coreplugins/advanced-network-merge/2.8.2-SNAPSHOT/pom.xml [JENKINS] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/advanced-network-merge-2.8.2-SNAPSHOT.jar> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cytoscape_2.X_application/modules/cytoscape.coreplugins$advanced-network-merge/builds/2011-05-11_20-34-47/archive/cytoscape.coreplugins/advanced-network-merge/2.8.2-20110512.004540-81/advanced-network-merge-2.8.2-SNAPSHOT.jar [JENKINS] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/advanced-network-merge-2.8.2-SNAPSHOT-javadoc.jar> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cytoscape_2.X_application/modules/cytoscape.coreplugins$advanced-network-merge/builds/2011-05-11_20-34-47/archive/cytoscape.coreplugins/advanced-network-merge/2.8.2-20110512.004540-81/advanced-network-merge-2.8.2-SNAPSHOT-javadoc.jar [JENKINS] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/advanced-network-merge-2.8.2-SNAPSHOT-sources.jar> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cytoscape_2.X_application/modules/cytoscape.coreplugins$advanced-network-merge/builds/2011-05-11_20-34-47/archive/cytoscape.coreplugins/advanced-network-merge/2.8.2-20110512.004540-81/advanced-network-merge-2.8.2-SNAPSHOT-sources.jar [JENKINS] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AdvancedNetworkMerge/target/advanced-network-merge-2.8.2-SNAPSHOT-jar-with-dependencies.jar> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cytoscape_2.X_application/modules/cytoscape.coreplugins$advanced-network-merge/builds/2011-05-11_20-34-47/archive/cytoscape.coreplugins/advanced-network-merge/2.8.2-20110512.004540-81/advanced-network-merge-2.8.2-SNAPSHOT-jar-with-dependencies.jar [INFO] [INFO] ------------------------------------------------------------------------ [INFO] Building Automatic Layout 2.8.2-SNAPSHOT [INFO] ------------------------------------------------------------------------ [INFO] [INFO] --- maven-resources-plugin:2.4.3:resources (default-resources) @ automatic-layout --- [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 1 resource [INFO] [INFO] --- maven-compiler-plugin:2.3.2:compile (default-compile) @ automatic-layout --- [INFO] Compiling 105 source files to <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/coreplugins/AutomaticLayout/target/classes> Sending e-mails to: [email protected] channel stopped ERROR: Failed to parse POMs java.io.IOException: Remote call on Channel to Maven [java, -cp, /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.401.jar:/R1/tools/maven/apache-maven-3.0.3/boot/plexus-classworlds-2.4.jar, org.jvnet.hudson.maven3.agent.Maven3Main, /R1/tools/maven/apache-maven-3.0.3, /R1/resources/webservers/tomcat_2/webapps/jenkins/WEB-INF/lib/remoting-1.401.jar, /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.401.jar, 49396] failed at hudson.remoting.Channel.call(Channel.java:639) at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:156) at hudson.maven.MavenModuleSetBuild$RunnerImpl.doRun(MavenModuleSetBuild.java:668) at hudson.model.AbstractBuild$AbstractRunner.run(AbstractBuild.java:421) at hudson.model.Run.run(Run.java:1362) at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:441) at hudson.model.ResourceController.execute(ResourceController.java:88) at hudson.model.Executor.run(Executor.java:145) Caused by: java.lang.OutOfMemoryError: PermGen space -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/cytoscape-cvs?hl=en.
