Author: scooter
Date: 2011-06-20 17:53:04 -0700 (Mon, 20 Jun 2011)
New Revision: 25826
Modified:
cytoscape/trunk/coreplugins/AdvancedNetworkMerge/pom.xml
cytoscape/trunk/coreplugins/AutomaticLayout/pom.xml
cytoscape/trunk/coreplugins/BioMartClient/pom.xml
cytoscape/trunk/coreplugins/CoreCommands/pom.xml
cytoscape/trunk/coreplugins/CytoscapeEditor2/pom.xml
cytoscape/trunk/coreplugins/EquationFunctions/pom.xml
cytoscape/trunk/coreplugins/ManualLayout/pom.xml
cytoscape/trunk/coreplugins/NCBIClient/pom.xml
cytoscape/trunk/coreplugins/NetworkAnalyzer/pom.xml
cytoscape/trunk/coreplugins/PSI-MI/pom.xml
cytoscape/trunk/coreplugins/QuickFind/pom.xml
cytoscape/trunk/coreplugins/RFilters/pom.xml
cytoscape/trunk/coreplugins/browser/pom.xml
cytoscape/trunk/coreplugins/cPath/pom.xml
cytoscape/trunk/coreplugins/cPath2/pom.xml
cytoscape/trunk/coreplugins/filters/pom.xml
cytoscape/trunk/coreplugins/linkout/pom.xml
Log:
Added manifests to the rest of the core plugins
Modified: cytoscape/trunk/coreplugins/AdvancedNetworkMerge/pom.xml
===================================================================
--- cytoscape/trunk/coreplugins/AdvancedNetworkMerge/pom.xml 2011-06-21
00:07:29 UTC (rev 25825)
+++ cytoscape/trunk/coreplugins/AdvancedNetworkMerge/pom.xml 2011-06-21
00:53:04 UTC (rev 25826)
@@ -41,6 +41,13 @@
<plugins>
<plugin>
<artifactId>maven-assembly-plugin</artifactId>
+ <configuration>
+ <archive>
+ <manifestEntries>
+
<Cytoscape-Plugin>csplugins.network.merge.NetworkMergePlugin</Cytoscape-Plugin>
+ </manifestEntries>
+ </archive>
+ </configuration>
</plugin>
</plugins>
</build>
Modified: cytoscape/trunk/coreplugins/AutomaticLayout/pom.xml
===================================================================
--- cytoscape/trunk/coreplugins/AutomaticLayout/pom.xml 2011-06-21 00:07:29 UTC
(rev 25825)
+++ cytoscape/trunk/coreplugins/AutomaticLayout/pom.xml 2011-06-21 00:53:04 UTC
(rev 25826)
@@ -41,6 +41,13 @@
<plugins>
<plugin>
<artifactId>maven-assembly-plugin</artifactId>
+ <configuration>
+ <archive>
+ <manifestEntries>
+
<Cytoscape-Plugin>csplugins.layout.LayoutPlugin</Cytoscape-Plugin>
+ </manifestEntries>
+ </archive>
+ </configuration>
</plugin>
</plugins>
</build>
Modified: cytoscape/trunk/coreplugins/BioMartClient/pom.xml
===================================================================
--- cytoscape/trunk/coreplugins/BioMartClient/pom.xml 2011-06-21 00:07:29 UTC
(rev 25825)
+++ cytoscape/trunk/coreplugins/BioMartClient/pom.xml 2011-06-21 00:53:04 UTC
(rev 25826)
@@ -41,6 +41,13 @@
<plugins>
<plugin>
<artifactId>maven-assembly-plugin</artifactId>
+ <configuration>
+ <archive>
+ <manifestEntries>
+
<Cytoscape-Plugin>edu.ucsd.bioeng.idekerlab.biomartclient.BiomartClientPlugin</Cytoscape-Plugin>
+ </manifestEntries>
+ </archive>
+ </configuration>
</plugin>
</plugins>
</build>
Modified: cytoscape/trunk/coreplugins/CoreCommands/pom.xml
===================================================================
--- cytoscape/trunk/coreplugins/CoreCommands/pom.xml 2011-06-21 00:07:29 UTC
(rev 25825)
+++ cytoscape/trunk/coreplugins/CoreCommands/pom.xml 2011-06-21 00:53:04 UTC
(rev 25826)
@@ -41,6 +41,13 @@
<plugins>
<plugin>
<artifactId>maven-assembly-plugin</artifactId>
+ <configuration>
+ <archive>
+ <manifestEntries>
+ <Cytoscape-Plugin>coreCommands.CoreCommands</Cytoscape-Plugin>
+ </manifestEntries>
+ </archive>
+ </configuration>
</plugin>
</plugins>
</build>
Modified: cytoscape/trunk/coreplugins/CytoscapeEditor2/pom.xml
===================================================================
--- cytoscape/trunk/coreplugins/CytoscapeEditor2/pom.xml 2011-06-21
00:07:29 UTC (rev 25825)
+++ cytoscape/trunk/coreplugins/CytoscapeEditor2/pom.xml 2011-06-21
00:53:04 UTC (rev 25826)
@@ -41,6 +41,13 @@
<plugins>
<plugin>
<artifactId>maven-assembly-plugin</artifactId>
+ <configuration>
+ <archive>
+ <manifestEntries>
+
<Cytoscape-Plugin>cytoscape.editor.CytoscapeEditorPlugin</Cytoscape-Plugin>
+ </manifestEntries>
+ </archive>
+ </configuration>
</plugin>
</plugins>
</build>
Modified: cytoscape/trunk/coreplugins/EquationFunctions/pom.xml
===================================================================
--- cytoscape/trunk/coreplugins/EquationFunctions/pom.xml 2011-06-21
00:07:29 UTC (rev 25825)
+++ cytoscape/trunk/coreplugins/EquationFunctions/pom.xml 2011-06-21
00:53:04 UTC (rev 25826)
@@ -41,6 +41,13 @@
<plugins>
<plugin>
<artifactId>maven-assembly-plugin</artifactId>
+ <configuration>
+ <archive>
+ <manifestEntries>
+
<Cytoscape-Plugin>org.cytoscape.EquationFunctions.EquationFunctionsPlugin</Cytoscape-Plugin>
+ </manifestEntries>
+ </archive>
+ </configuration>
</plugin>
</plugins>
</build>
Modified: cytoscape/trunk/coreplugins/ManualLayout/pom.xml
===================================================================
--- cytoscape/trunk/coreplugins/ManualLayout/pom.xml 2011-06-21 00:07:29 UTC
(rev 25825)
+++ cytoscape/trunk/coreplugins/ManualLayout/pom.xml 2011-06-21 00:53:04 UTC
(rev 25826)
@@ -41,6 +41,13 @@
<plugins>
<plugin>
<artifactId>maven-assembly-plugin</artifactId>
+ <configuration>
+ <archive>
+ <manifestEntries>
+
<Cytoscape-Plugin>ManualLayout.ManualLayoutPlugin</Cytoscape-Plugin>
+ </manifestEntries>
+ </archive>
+ </configuration>
</plugin>
</plugins>
</build>
Modified: cytoscape/trunk/coreplugins/NCBIClient/pom.xml
===================================================================
--- cytoscape/trunk/coreplugins/NCBIClient/pom.xml 2011-06-21 00:07:29 UTC
(rev 25825)
+++ cytoscape/trunk/coreplugins/NCBIClient/pom.xml 2011-06-21 00:53:04 UTC
(rev 25826)
@@ -41,6 +41,13 @@
<plugins>
<plugin>
<artifactId>maven-assembly-plugin</artifactId>
+ <configuration>
+ <archive>
+ <manifestEntries>
+
<Cytoscape-Plugin>edu.ucsd.bioeng.idekerlab.ncbiclient.NCBIClientPlugin</Cytoscape-Plugin>
+ </manifestEntries>
+ </archive>
+ </configuration>
</plugin>
</plugins>
</build>
Modified: cytoscape/trunk/coreplugins/NetworkAnalyzer/pom.xml
===================================================================
--- cytoscape/trunk/coreplugins/NetworkAnalyzer/pom.xml 2011-06-21 00:07:29 UTC
(rev 25825)
+++ cytoscape/trunk/coreplugins/NetworkAnalyzer/pom.xml 2011-06-21 00:53:04 UTC
(rev 25826)
@@ -41,6 +41,13 @@
<plugins>
<plugin>
<artifactId>maven-assembly-plugin</artifactId>
+ <configuration>
+ <archive>
+ <manifestEntries>
+
<Cytoscape-Plugin>de.mpg.mpi_inf.bioinf.netanalyzer.Plugin</Cytoscape-Plugin>
+ </manifestEntries>
+ </archive>
+ </configuration>
</plugin>
</plugins>
</build>
Modified: cytoscape/trunk/coreplugins/PSI-MI/pom.xml
===================================================================
--- cytoscape/trunk/coreplugins/PSI-MI/pom.xml 2011-06-21 00:07:29 UTC (rev
25825)
+++ cytoscape/trunk/coreplugins/PSI-MI/pom.xml 2011-06-21 00:53:04 UTC (rev
25826)
@@ -42,6 +42,13 @@
<plugins>
<plugin>
<artifactId>maven-assembly-plugin</artifactId>
+ <configuration>
+ <archive>
+ <manifestEntries>
+
<Cytoscape-Plugin>org.cytoscape.coreplugin.psi_mi.plugin.PsiMiPlugIn</Cytoscape-Plugin>
+ </manifestEntries>
+ </archive>
+ </configuration>
</plugin>
<plugin>
<groupId>org.jvnet.jaxb2.maven2</groupId>
Modified: cytoscape/trunk/coreplugins/QuickFind/pom.xml
===================================================================
--- cytoscape/trunk/coreplugins/QuickFind/pom.xml 2011-06-21 00:07:29 UTC
(rev 25825)
+++ cytoscape/trunk/coreplugins/QuickFind/pom.xml 2011-06-21 00:53:04 UTC
(rev 25826)
@@ -41,6 +41,13 @@
<plugins>
<plugin>
<artifactId>maven-assembly-plugin</artifactId>
+ <configuration>
+ <archive>
+ <manifestEntries>
+
<Cytoscape-Plugin>csplugins.quickfind.plugin.QuickFindPlugIn</Cytoscape-Plugin>
+ </manifestEntries>
+ </archive>
+ </configuration>
</plugin>
</plugins>
</build>
Modified: cytoscape/trunk/coreplugins/RFilters/pom.xml
===================================================================
--- cytoscape/trunk/coreplugins/RFilters/pom.xml 2011-06-21 00:07:29 UTC
(rev 25825)
+++ cytoscape/trunk/coreplugins/RFilters/pom.xml 2011-06-21 00:53:04 UTC
(rev 25826)
@@ -41,6 +41,13 @@
<plugins>
<plugin>
<artifactId>maven-assembly-plugin</artifactId>
+ <configuration>
+ <archive>
+ <manifestEntries>
+
<Cytoscape-Plugin>filter.cytoscape.FilterPlugin</Cytoscape-Plugin>
+ </manifestEntries>
+ </archive>
+ </configuration>
</plugin>
</plugins>
</build>
Modified: cytoscape/trunk/coreplugins/browser/pom.xml
===================================================================
--- cytoscape/trunk/coreplugins/browser/pom.xml 2011-06-21 00:07:29 UTC (rev
25825)
+++ cytoscape/trunk/coreplugins/browser/pom.xml 2011-06-21 00:53:04 UTC (rev
25826)
@@ -41,6 +41,13 @@
<plugins>
<plugin>
<artifactId>maven-assembly-plugin</artifactId>
+ <configuration>
+ <archive>
+ <manifestEntries>
+
<Cytoscape-Plugin>browser.AttributeBrowserPlugin</Cytoscape-Plugin>
+ </manifestEntries>
+ </archive>
+ </configuration>
</plugin>
</plugins>
</build>
Modified: cytoscape/trunk/coreplugins/cPath/pom.xml
===================================================================
--- cytoscape/trunk/coreplugins/cPath/pom.xml 2011-06-21 00:07:29 UTC (rev
25825)
+++ cytoscape/trunk/coreplugins/cPath/pom.xml 2011-06-21 00:53:04 UTC (rev
25826)
@@ -41,6 +41,13 @@
<plugins>
<plugin>
<artifactId>maven-assembly-plugin</artifactId>
+ <configuration>
+ <archive>
+ <manifestEntries>
+
<Cytoscape-Plugin>org.cytoscape.coreplugin.cpath2.plugin.CPathPlugIn2</Cytoscape-Plugin>
+ </manifestEntries>
+ </archive>
+ </configuration>
</plugin>
</plugins>
</build>
Modified: cytoscape/trunk/coreplugins/cPath2/pom.xml
===================================================================
--- cytoscape/trunk/coreplugins/cPath2/pom.xml 2011-06-21 00:07:29 UTC (rev
25825)
+++ cytoscape/trunk/coreplugins/cPath2/pom.xml 2011-06-21 00:53:04 UTC (rev
25826)
@@ -67,6 +67,13 @@
<plugins>
<plugin>
<artifactId>maven-assembly-plugin</artifactId>
+ <configuration>
+ <archive>
+ <manifestEntries>
+
<Cytoscape-Plugin>org.cytoscape.coreplugin.cpath.plugin.CPathPlugIn</Cytoscape-Plugin>
+ </manifestEntries>
+ </archive>
+ </configuration>
</plugin>
<plugin>
<groupId>org.jvnet.jaxb2.maven2</groupId>
Modified: cytoscape/trunk/coreplugins/filters/pom.xml
===================================================================
--- cytoscape/trunk/coreplugins/filters/pom.xml 2011-06-21 00:07:29 UTC (rev
25825)
+++ cytoscape/trunk/coreplugins/filters/pom.xml 2011-06-21 00:53:04 UTC (rev
25826)
@@ -41,6 +41,13 @@
<plugins>
<plugin>
<artifactId>maven-assembly-plugin</artifactId>
+ <configuration>
+ <archive>
+ <manifestEntries>
+
<Cytoscape-Plugin>cytoscape.filters.FilterPlugin</Cytoscape-Plugin>
+ </manifestEntries>
+ </archive>
+ </configuration>
</plugin>
</plugins>
</build>
Modified: cytoscape/trunk/coreplugins/linkout/pom.xml
===================================================================
--- cytoscape/trunk/coreplugins/linkout/pom.xml 2011-06-21 00:07:29 UTC (rev
25825)
+++ cytoscape/trunk/coreplugins/linkout/pom.xml 2011-06-21 00:53:04 UTC (rev
25826)
@@ -41,6 +41,13 @@
<plugins>
<plugin>
<artifactId>maven-assembly-plugin</artifactId>
+ <configuration>
+ <archive>
+ <manifestEntries>
+ <Cytoscape-Plugin>linkout.LinkOutPlugin</Cytoscape-Plugin>
+ </manifestEntries>
+ </archive>
+ </configuration>
</plugin>
</plugins>
</build>
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