Author: pwang
Date: 2011-07-07 18:20:10 -0700 (Thu, 07 Jul 2011)
New Revision: 26115
Modified:
core3/table-import-impl/trunk/src/main/java/org/cytoscape/tableimport/internal/reader/AttributeMappingParameters.java
Log:
clean up
Modified:
core3/table-import-impl/trunk/src/main/java/org/cytoscape/tableimport/internal/reader/AttributeMappingParameters.java
===================================================================
---
core3/table-import-impl/trunk/src/main/java/org/cytoscape/tableimport/internal/reader/AttributeMappingParameters.java
2011-07-08 01:17:36 UTC (rev 26114)
+++
core3/table-import-impl/trunk/src/main/java/org/cytoscape/tableimport/internal/reader/AttributeMappingParameters.java
2011-07-08 01:20:10 UTC (rev 26115)
@@ -283,10 +283,6 @@
it = null;
}
-
- if ((this.mappingAttribute != null) &&
!this.mappingAttribute.equals(ID)) {
- buildAttribute2IDMap(it);
- }
}
/**
@@ -444,74 +440,8 @@
return attr2id;
}
- /**
- * Building hashmap for attribute <--> object ID mapping.
- *
- */
- private void buildAttribute2IDMap(Iterator it) {
- // Mapping from attribute value to object ID.
- attr2id = new HashMap<String, List<String>>();
- String objectID = null;
- Object valObj = null;
- while (it.hasNext()) {
- switch (objectType) {
- case NODE:
-
- CyNode node = (CyNode) it.next();
- objectID =
Long.toString(node.getSUID()); //.getIdentifier();
-
- //if
(CyAttributesUtils.getClass(mappingAttribute, attributes) == List.class) {
- // valObj =
attributes.getListAttribute(objectID, mappingAttribute);
- //} else if
(CyAttributesUtils.getClass(mappingAttribute, attributes) != Map.class) {
- // valObj =
attributes.getAttribute(objectID, mappingAttribute);
- //}
-
- valObj =
node.getCyRow(mappingAttribute);
-
- break;
-
- case EDGE:
-
- CyEdge edge = (CyEdge) it.next();
- objectID =
Long.toString(edge.getSUID()); //.getIdentifier();
-
- //if
(CyAttributesUtils.getClass(mappingAttribute, attributes) == List.class) {
- // valObj =
attributes.getListAttribute(objectID, mappingAttribute);
- //} else if
(CyAttributesUtils.getClass(mappingAttribute, attributes) != Map.class) {
- // valObj =
attributes.getAttribute(objectID, mappingAttribute);
- //}
-
- break;
-
- case NETWORK:
- // Not supported yet.
- it.next();
-
- break;
-
- default:
- }
-
- // Put the <attribute value>-<object ID list> pair to
the Map object.
- if (valObj != null) {
- if (valObj instanceof List) {
- List keys = (List) valObj;
-
- for (Object key : keys) {
- if (key != null) {
-
putAttrValue(key.toString(), objectID);
- }
- }
- } else {
- putAttrValue(valObj.toString(),
objectID);
- }
-
- }
- }
- }
-
private void putAttrValue(String attributeValue, String objectID) {
List<String> objIdList = null;
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