Author: mes
Date: 2011-09-16 16:11:35 -0700 (Fri, 16 Sep 2011)
New Revision: 26848
Added:
core3/gui-distribution/branches/no-spring/startlevel-10/
core3/gui-distribution/branches/no-spring/startlevel-10/pom.xml
core3/gui-distribution/branches/no-spring/startlevel-15/
core3/gui-distribution/branches/no-spring/startlevel-15/pom.xml
core3/gui-distribution/branches/no-spring/startlevel-20/
core3/gui-distribution/branches/no-spring/startlevel-20/pom.xml
core3/gui-distribution/branches/no-spring/startlevel-25/
core3/gui-distribution/branches/no-spring/startlevel-25/pom.xml
core3/gui-distribution/branches/no-spring/startlevel-30/
core3/gui-distribution/branches/no-spring/startlevel-30/pom.xml
core3/gui-distribution/branches/no-spring/startlevel-32/
core3/gui-distribution/branches/no-spring/startlevel-32/pom.xml
core3/gui-distribution/branches/no-spring/startlevel-35/
core3/gui-distribution/branches/no-spring/startlevel-35/pom.xml
core3/gui-distribution/branches/no-spring/startlevel-40/
core3/gui-distribution/branches/no-spring/startlevel-40/pom.xml
core3/gui-distribution/branches/no-spring/startlevel-42/
core3/gui-distribution/branches/no-spring/startlevel-42/pom.xml
core3/gui-distribution/branches/no-spring/startlevel-43/
core3/gui-distribution/branches/no-spring/startlevel-43/pom.xml
core3/gui-distribution/branches/no-spring/startlevel-45/
core3/gui-distribution/branches/no-spring/startlevel-45/pom.xml
core3/gui-distribution/branches/no-spring/startlevel-50/
core3/gui-distribution/branches/no-spring/startlevel-50/pom.xml
Modified:
core3/gui-distribution/branches/no-spring/distribution/pom.xml
core3/gui-distribution/branches/no-spring/distribution/src/main/assembly/src.xml
core3/gui-distribution/branches/no-spring/distribution/src/main/resources/configurations/services/org.ops4j.pax.logging.properties
core3/gui-distribution/branches/no-spring/pom.xml
core3/gui-distribution/branches/no-spring/startlevel-3/pom.xml
Log:
first shot at proper startup order
Modified: core3/gui-distribution/branches/no-spring/distribution/pom.xml
===================================================================
--- core3/gui-distribution/branches/no-spring/distribution/pom.xml
2011-09-16 23:10:23 UTC (rev 26847)
+++ core3/gui-distribution/branches/no-spring/distribution/pom.xml
2011-09-16 23:11:35 UTC (rev 26848)
@@ -54,24 +54,6 @@
<version>3.0.0-M4-SNAPSHOT</version>
<classifier>jar-with-dependencies</classifier>
</dependency>
-<!-- <dependency> -->
-<!-- <groupId>org.cytoscape.gui-distribution</groupId> -->
-<!-- <artifactId>startlevel-1</artifactId> -->
-<!-- <version>${project.version}</version> -->
-<!-- <type>zip</type> -->
-<!-- </dependency> -->
-<!-- <dependency> -->
-<!-- <groupId>org.cytoscape.gui-distribution</groupId> -->
-<!-- <artifactId>startlevel-2</artifactId> -->
-<!-- <version>${project.version}</version> -->
-<!-- <type>zip</type> -->
-<!-- </dependency> -->
-<!-- <dependency> -->
-<!-- <groupId>org.cytoscape.gui-distribution</groupId> -->
-<!-- <artifactId>startlevel-3</artifactId> -->
-<!-- <version>${project.version}</version> -->
-<!-- <type>zip</type> -->
-<!-- </dependency> -->
</dependencies>
</project>
Modified:
core3/gui-distribution/branches/no-spring/distribution/src/main/assembly/src.xml
===================================================================
---
core3/gui-distribution/branches/no-spring/distribution/src/main/assembly/src.xml
2011-09-16 23:10:23 UTC (rev 26847)
+++
core3/gui-distribution/branches/no-spring/distribution/src/main/assembly/src.xml
2011-09-16 23:11:35 UTC (rev 26848)
@@ -27,6 +27,66 @@
<fileMode>0644</fileMode>
</fileSet>
<fileSet>
+ <directory>${basedir}/../startlevel-10/target/bundles</directory>
+ <outputDirectory>bundles/startlevel-10</outputDirectory>
+ <fileMode>0644</fileMode>
+ </fileSet>
+ <fileSet>
+ <directory>${basedir}/../startlevel-15/target/bundles</directory>
+ <outputDirectory>bundles/startlevel-15</outputDirectory>
+ <fileMode>0644</fileMode>
+ </fileSet>
+ <fileSet>
+ <directory>${basedir}/../startlevel-20/target/bundles</directory>
+ <outputDirectory>bundles/startlevel-20</outputDirectory>
+ <fileMode>0644</fileMode>
+ </fileSet>
+ <fileSet>
+ <directory>${basedir}/../startlevel-25/target/bundles</directory>
+ <outputDirectory>bundles/startlevel-25</outputDirectory>
+ <fileMode>0644</fileMode>
+ </fileSet>
+ <fileSet>
+ <directory>${basedir}/../startlevel-30/target/bundles</directory>
+ <outputDirectory>bundles/startlevel-30</outputDirectory>
+ <fileMode>0644</fileMode>
+ </fileSet>
+ <fileSet>
+ <directory>${basedir}/../startlevel-32/target/bundles</directory>
+ <outputDirectory>bundles/startlevel-32</outputDirectory>
+ <fileMode>0644</fileMode>
+ </fileSet>
+ <fileSet>
+ <directory>${basedir}/../startlevel-35/target/bundles</directory>
+ <outputDirectory>bundles/startlevel-35</outputDirectory>
+ <fileMode>0644</fileMode>
+ </fileSet>
+ <fileSet>
+ <directory>${basedir}/../startlevel-40/target/bundles</directory>
+ <outputDirectory>bundles/startlevel-40</outputDirectory>
+ <fileMode>0644</fileMode>
+ </fileSet>
+ <fileSet>
+ <directory>${basedir}/../startlevel-42/target/bundles</directory>
+ <outputDirectory>bundles/startlevel-42</outputDirectory>
+ <fileMode>0644</fileMode>
+ </fileSet>
+ <fileSet>
+ <directory>${basedir}/../startlevel-43/target/bundles</directory>
+ <outputDirectory>bundles/startlevel-43</outputDirectory>
+ <fileMode>0644</fileMode>
+ </fileSet>
+ <fileSet>
+ <directory>${basedir}/../startlevel-45/target/bundles</directory>
+ <outputDirectory>bundles/startlevel-45</outputDirectory>
+ <fileMode>0644</fileMode>
+ </fileSet>
+ <fileSet>
+ <directory>${basedir}/../startlevel-50/target/bundles</directory>
+ <outputDirectory>bundles/startlevel-50</outputDirectory>
+ <fileMode>0644</fileMode>
+ </fileSet>
+ <fileSet>
<directory>${basedir}/src/main/bin</directory>
<outputDirectory>/</outputDirectory>
<fileMode>0755</fileMode>
Modified:
core3/gui-distribution/branches/no-spring/distribution/src/main/resources/configurations/services/org.ops4j.pax.logging.properties
===================================================================
---
core3/gui-distribution/branches/no-spring/distribution/src/main/resources/configurations/services/org.ops4j.pax.logging.properties
2011-09-16 23:10:23 UTC (rev 26847)
+++
core3/gui-distribution/branches/no-spring/distribution/src/main/resources/configurations/services/org.ops4j.pax.logging.properties
2011-09-16 23:11:35 UTC (rev 26848)
@@ -3,7 +3,8 @@
# The following specifies that log messages are sent to the Console and
# status bar
-log4j.rootLogger=ALL, stdout, osgi:OrgCytoscapeLogSwingAdvancedAppender,
osgi:OrgCytoscapeLogSwingSimpleAppender,
osgi:OrgCytoscapeLogSwingStatusBarAppender
+#log4j.rootLogger=ALL, stdout, osgi:OrgCytoscapeLogSwingAdvancedAppender,
osgi:OrgCytoscapeLogSwingSimpleAppender,
osgi:OrgCytoscapeLogSwingStatusBarAppender
+log4j.rootLogger=ALL, file, osgi:OrgCytoscapeLogSwingAdvancedAppender,
osgi:OrgCytoscapeLogSwingSimpleAppender,
osgi:OrgCytoscapeLogSwingStatusBarAppender
#
# Log messages from the standard library classes, JVM-specific
@@ -18,7 +19,7 @@
#
log4j.appender.file=org.apache.log4j.DailyRollingFileAppender
-log4j.appender.file.threshold=INFO
+log4j.appender.file.threshold=DEBUG
log4j.appender.file.File=framework-cytoscape.log
log4j.appender.file.layout=org.apache.log4j.PatternLayout
log4j.appender.file.layout.ConversionPattern=%d [%t] %-5p %c - %m%n
@@ -26,7 +27,7 @@
log4j.appender.stdout=org.apache.log4j.ConsoleAppender
log4j.appender.stdout.layout.ConversionPattern=%t %p [%c] - %m%n
log4j.appender.stdout.layout=org.apache.log4j.PatternLayout
-log4j.appender.stdout.threshold=ERROR
+log4j.appender.stdout.threshold=DEBUG
log4j.logger.java=NONE,file
Modified: core3/gui-distribution/branches/no-spring/pom.xml
===================================================================
--- core3/gui-distribution/branches/no-spring/pom.xml 2011-09-16 23:10:23 UTC
(rev 26847)
+++ core3/gui-distribution/branches/no-spring/pom.xml 2011-09-16 23:11:35 UTC
(rev 26848)
@@ -104,6 +104,18 @@
<module>startlevel-1</module>
<module>startlevel-2</module>
<module>startlevel-3</module>
+ <module>startlevel-10</module>
+ <module>startlevel-15</module>
+ <module>startlevel-20</module>
+ <module>startlevel-25</module>
+ <module>startlevel-30</module>
+ <module>startlevel-32</module>
+ <module>startlevel-35</module>
+ <module>startlevel-40</module>
+ <module>startlevel-42</module>
+ <module>startlevel-43</module>
+ <module>startlevel-45</module>
+ <module>startlevel-50</module>
<module>distribution</module>
</modules>
</profile>
@@ -114,6 +126,18 @@
<module>startlevel-1</module>
<module>startlevel-2</module>
<module>startlevel-3</module>
+ <module>startlevel-10</module>
+ <module>startlevel-15</module>
+ <module>startlevel-20</module>
+ <module>startlevel-25</module>
+ <module>startlevel-30</module>
+ <module>startlevel-32</module>
+ <module>startlevel-35</module>
+ <module>startlevel-40</module>
+ <module>startlevel-42</module>
+ <module>startlevel-43</module>
+ <module>startlevel-45</module>
+ <module>startlevel-50</module>
<module>distribution</module>
</modules>
</profile>
Added: core3/gui-distribution/branches/no-spring/startlevel-10/pom.xml
===================================================================
--- core3/gui-distribution/branches/no-spring/startlevel-10/pom.xml
(rev 0)
+++ core3/gui-distribution/branches/no-spring/startlevel-10/pom.xml
2011-09-16 23:11:35 UTC (rev 26848)
@@ -0,0 +1,131 @@
+<project xmlns="http://maven.apache.org/POM/4.0.0";
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance";
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0
http://maven.apache.org/maven-v4_0_0.xsd";>
+
+ <parent>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>gui-distribution</artifactId>
+ <version>3.0.0-M4-SNAPSHOT</version>
+ </parent>
+
+ <modelVersion>4.0.0</modelVersion>
+ <groupId>org.cytoscape.gui-distribution</groupId>
+ <artifactId>startlevel-10</artifactId>
+
+ <packaging>pom</packaging>
+
+ <name>StartLevel 10 Bundles</name>
+
+ <build>
+ <plugins>
+ <plugin>
+ <artifactId>maven-dependency-plugin</artifactId>
+ </plugin>
+ </plugins>
+ </build>
+
+ <dependencies>
+
+
+ <!-- Cytoscape API Bundles -->
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>equations-api</artifactId>
+ <version>${cytoscape.api.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>di-util-api</artifactId>
+ <version>${cytoscape.api.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>model-api</artifactId>
+ <version>${cytoscape.api.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>viewmodel-api</artifactId>
+ <version>${cytoscape.api.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>vizmap-api</artifactId>
+ <version>${cytoscape.api.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>vizmap-gui-api</artifactId>
+ <version>${cytoscape.api.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>work-api</artifactId>
+ <version>${cytoscape.api.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>work-swing-api</artifactId>
+ <version>${cytoscape.api.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>swing-application-api</artifactId>
+ <version>${cytoscape.api.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>event-api</artifactId>
+ <version>${cytoscape.api.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>plugin-api</artifactId>
+ <version>${cytoscape.api.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>dnd-api</artifactId>
+ <version>${cytoscape.api.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>io-api</artifactId>
+ <version>${cytoscape.api.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>session-api</artifactId>
+ <version>${cytoscape.api.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>core-task-api</artifactId>
+ <version>${cytoscape.api.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>layout-api</artifactId>
+ <version>${cytoscape.api.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>presentation-api</artifactId>
+ <version>${cytoscape.api.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>property-api</artifactId>
+ <version>${cytoscape.api.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>webservice-api</artifactId>
+ <version>${cytoscape.api.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>application-api</artifactId>
+ <version>${cytoscape.api.version}</version>
+ </dependency>
+ </dependencies>
+
+</project>
Added: core3/gui-distribution/branches/no-spring/startlevel-15/pom.xml
===================================================================
--- core3/gui-distribution/branches/no-spring/startlevel-15/pom.xml
(rev 0)
+++ core3/gui-distribution/branches/no-spring/startlevel-15/pom.xml
2011-09-16 23:11:35 UTC (rev 26848)
@@ -0,0 +1,48 @@
+<project xmlns="http://maven.apache.org/POM/4.0.0";
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance";
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0
http://maven.apache.org/maven-v4_0_0.xsd";>
+
+ <parent>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>gui-distribution</artifactId>
+ <version>3.0.0-M4-SNAPSHOT</version>
+ </parent>
+
+ <modelVersion>4.0.0</modelVersion>
+ <groupId>org.cytoscape.gui-distribution</groupId>
+ <artifactId>startlevel-15</artifactId>
+
+ <packaging>pom</packaging>
+
+ <name>StartLevel 15 Bundles</name>
+
+ <build>
+ <plugins>
+ <plugin>
+ <artifactId>maven-dependency-plugin</artifactId>
+ </plugin>
+ </plugins>
+ </build>
+
+ <dependencies>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>property-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>graph-render</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>util-intr</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>spacial</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ </dependencies>
+
+</project>
Added: core3/gui-distribution/branches/no-spring/startlevel-20/pom.xml
===================================================================
--- core3/gui-distribution/branches/no-spring/startlevel-20/pom.xml
(rev 0)
+++ core3/gui-distribution/branches/no-spring/startlevel-20/pom.xml
2011-09-16 23:11:35 UTC (rev 26848)
@@ -0,0 +1,48 @@
+<project xmlns="http://maven.apache.org/POM/4.0.0";
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance";
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0
http://maven.apache.org/maven-v4_0_0.xsd";>
+
+ <parent>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>gui-distribution</artifactId>
+ <version>3.0.0-M4-SNAPSHOT</version>
+ </parent>
+
+ <modelVersion>4.0.0</modelVersion>
+ <groupId>org.cytoscape.gui-distribution</groupId>
+ <artifactId>startlevel-20</artifactId>
+
+ <packaging>pom</packaging>
+
+ <name>StartLevel 20 Bundles</name>
+
+ <build>
+ <plugins>
+ <plugin>
+ <artifactId>maven-dependency-plugin</artifactId>
+ </plugin>
+ </plugins>
+ </build>
+
+ <dependencies>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>equations-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>event-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>swing-util-api</artifactId>
+ <version>${cytoscape.api.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>service-api</artifactId>
+ <version>${cytoscape.api.version}</version>
+ </dependency>
+ </dependencies>
+
+</project>
Added: core3/gui-distribution/branches/no-spring/startlevel-25/pom.xml
===================================================================
--- core3/gui-distribution/branches/no-spring/startlevel-25/pom.xml
(rev 0)
+++ core3/gui-distribution/branches/no-spring/startlevel-25/pom.xml
2011-09-16 23:11:35 UTC (rev 26848)
@@ -0,0 +1,43 @@
+<project xmlns="http://maven.apache.org/POM/4.0.0";
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance";
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0
http://maven.apache.org/maven-v4_0_0.xsd";>
+
+ <parent>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>gui-distribution</artifactId>
+ <version>3.0.0-M4-SNAPSHOT</version>
+ </parent>
+
+ <modelVersion>4.0.0</modelVersion>
+ <groupId>org.cytoscape.gui-distribution</groupId>
+ <artifactId>startlevel-25</artifactId>
+
+ <packaging>pom</packaging>
+
+ <name>StartLevel 25 Bundles</name>
+
+ <build>
+ <plugins>
+ <plugin>
+ <artifactId>maven-dependency-plugin</artifactId>
+ </plugin>
+ </plugins>
+ </build>
+
+ <dependencies>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>model-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>work-swing-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>presentation-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ </dependencies>
+
+</project>
Modified: core3/gui-distribution/branches/no-spring/startlevel-3/pom.xml
===================================================================
--- core3/gui-distribution/branches/no-spring/startlevel-3/pom.xml
2011-09-16 23:10:23 UTC (rev 26847)
+++ core3/gui-distribution/branches/no-spring/startlevel-3/pom.xml
2011-09-16 23:11:35 UTC (rev 26848)
@@ -24,7 +24,7 @@
<dependencies>
- <!-- Spring Framework Bundles -->
+ <!-- Spring Framework Bundles
<dependency>
<groupId>org.springframework</groupId>
<artifactId>org.springframework.aop</artifactId>
@@ -74,16 +74,6 @@
</dependency>
<dependency>
<groupId>org.springframework.osgi</groupId>
- <artifactId>spring-osgi-extender</artifactId>
- <version>${spring.osgi.version}</version>
- </dependency>
- <dependency>
- <groupId>org.springframework.osgi</groupId>
- <artifactId>spring-osgi-core</artifactId>
- <version>${spring.osgi.version}</version>
- </dependency>
- <dependency>
- <groupId>org.springframework.osgi</groupId>
<artifactId>spring-osgi-io</artifactId>
<version>${spring.osgi.version}</version>
</dependency>
@@ -100,6 +90,18 @@
<version>1.6.3.RELEASE</version>
</dependency>
+ <dependency>
+ <groupId>org.springframework.osgi</groupId>
+ <artifactId>spring-osgi-extender</artifactId>
+ <version>${spring.osgi.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.springframework.osgi</groupId>
+ <artifactId>spring-osgi-core</artifactId>
+ <version>${spring.osgi.version}</version>
+ </dependency>
+
+ -->
<!-- 3rd Party Libraries -->
<!-- Latest version of iText has broken OSGi metadata and we
have to wait until they fix it... -->
<!-- <dependency>
@@ -140,242 +142,7 @@
<version>2.1</version>
</dependency>
- <!-- Cytoscape API Bundles -->
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>di-util-api</artifactId>
- <version>${cytoscape.api.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>model-api</artifactId>
- <version>${cytoscape.api.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>viewmodel-api</artifactId>
- <version>${cytoscape.api.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>vizmap-api</artifactId>
- <version>${cytoscape.api.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>vizmap-gui-api</artifactId>
- <version>${cytoscape.api.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>work-api</artifactId>
- <version>${cytoscape.api.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>work-swing-api</artifactId>
- <version>${cytoscape.api.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>swing-application-api</artifactId>
- <version>${cytoscape.api.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>event-api</artifactId>
- <version>${cytoscape.api.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>plugin-api</artifactId>
- <version>${cytoscape.api.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>dnd-api</artifactId>
- <version>${cytoscape.api.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>io-api</artifactId>
- <version>${cytoscape.api.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>session-api</artifactId>
- <version>${cytoscape.api.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>core-task-api</artifactId>
- <version>${cytoscape.api.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>layout-api</artifactId>
- <version>${cytoscape.api.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>layout-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>presentation-api</artifactId>
- <version>${cytoscape.api.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>property-api</artifactId>
- <version>${cytoscape.api.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>webservice-api</artifactId>
- <version>${cytoscape.api.version}</version>
- </dependency>
-
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>application-api</artifactId>
- <version>${cytoscape.api.version}</version>
- </dependency>
- <!-- Cytoscape Implementation Bundles -->
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>search-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>table-browser-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>swing-application-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>ding-presentation-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>event-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>model-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>work-swing-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>core-task-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>session-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>io-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>viewmodel-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>vizmap-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>graph-render</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>util-intr</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>spacial</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>equations-api</artifactId>
- <version>${cytoscape.api.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>equations-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>vizmap-gui-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>log-swing-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>property-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>swing-util-api</artifactId>
- <version>${cytoscape.api.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>manual-layout-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>layout-cytoscape-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>webservice-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>presentation-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
-
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>application-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
-
<!-- Other dependencies -->
<dependency>
<groupId>cytoscape-sun</groupId>
@@ -393,60 +160,12 @@
<version>1.2.0</version>
</dependency>
- <!-- Simplified Plugin Support -->
<dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>plugin-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
-
- <!-- A utility that allows you to register services dynamically
-->
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>service-api</artifactId>
- <version>${cytoscape.api.version}</version>
- </dependency>
-
- <!-- Editor Plugin -->
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>editor-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
-
- <!-- prefuse layouts -->
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>layout-prefuse-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
- <dependency>
<groupId>cytoscape-temp</groupId>
<artifactId>prefuse</artifactId>
<version>20071021</version>
</dependency>
- <!-- linkout plugin -->
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>linkout-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
-
- <!-- PSI-MI -->
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>psi-mi-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
-
- <!-- network analyzer -->
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>network-analyzer-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
-
<!-- Required by plugin manager -->
<dependency>
<groupId>org.cytoscape.wrappers</groupId>
@@ -464,13 +183,6 @@
<version>1.0.3</version>
</dependency>
- <!-- Ding's custom graphics manager -->
- <dependency>
- <groupId>org.cytoscape</groupId>
-
<artifactId>ding-customgraphics-manager-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
-
<!-- freehep -->
<dependency>
<groupId>cytoscape-temp</groupId>
@@ -527,44 +239,14 @@
<version>3.6</version>
</dependency>
- <!-- table-import-imp -->
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>table-import-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
- <!-- Web service clients -->
<dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>webservice-biomart-client-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>webservice-ncbi-client-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
-
- <!-- Filters -->
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>filter-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
- <dependency>
<groupId>cytoscape-temp</groupId>
<artifactId>violinstrings</artifactId>
<version>1.0.2</version>
</dependency>
- <!-- SBML -->
<dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>sbml-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
- <dependency>
<groupId>cytoscape-temp</groupId>
<artifactId>jsbml</artifactId>
<version>0.8-b1</version>
@@ -600,13 +282,7 @@
<version>1.3.1</version>
</dependency>
- <!-- BioPAX plugin -->
<dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>biopax-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
- <dependency>
<groupId>cytoscape-temp</groupId>
<artifactId>paxtools-core</artifactId>
<version>3.0.0</version>
@@ -627,25 +303,12 @@
<version>1.1</version>
</dependency>
- <!-- cPath2 plugin -->
<dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>cpath2-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
- <dependency>
<groupId>cytoscape-temp</groupId>
<artifactId>commons-httpclient</artifactId>
<version>3.1</version>
</dependency>
- <!-- network merge plugin -->
- <dependency>
- <groupId>org.cytoscape</groupId>
- <artifactId>network-merge-impl</artifactId>
- <version>${cytoscape.impl.version}</version>
- </dependency>
-
<!-- to load bundle plugins -->
<dependency>
<groupId>org.apache.felix</groupId>
Added: core3/gui-distribution/branches/no-spring/startlevel-30/pom.xml
===================================================================
--- core3/gui-distribution/branches/no-spring/startlevel-30/pom.xml
(rev 0)
+++ core3/gui-distribution/branches/no-spring/startlevel-30/pom.xml
2011-09-16 23:11:35 UTC (rev 26848)
@@ -0,0 +1,43 @@
+<project xmlns="http://maven.apache.org/POM/4.0.0";
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance";
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0
http://maven.apache.org/maven-v4_0_0.xsd";>
+
+ <parent>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>gui-distribution</artifactId>
+ <version>3.0.0-M4-SNAPSHOT</version>
+ </parent>
+
+ <modelVersion>4.0.0</modelVersion>
+ <groupId>org.cytoscape.gui-distribution</groupId>
+ <artifactId>startlevel-30</artifactId>
+
+ <packaging>pom</packaging>
+
+ <name>StartLevel 30 Bundles</name>
+
+ <build>
+ <plugins>
+ <plugin>
+ <artifactId>maven-dependency-plugin</artifactId>
+ </plugin>
+ </plugins>
+ </build>
+
+ <dependencies>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>layout-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>viewmodel-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>vizmap-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ </dependencies>
+
+</project>
Added: core3/gui-distribution/branches/no-spring/startlevel-32/pom.xml
===================================================================
--- core3/gui-distribution/branches/no-spring/startlevel-32/pom.xml
(rev 0)
+++ core3/gui-distribution/branches/no-spring/startlevel-32/pom.xml
2011-09-16 23:11:35 UTC (rev 26848)
@@ -0,0 +1,33 @@
+<project xmlns="http://maven.apache.org/POM/4.0.0";
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance";
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0
http://maven.apache.org/maven-v4_0_0.xsd";>
+
+ <parent>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>gui-distribution</artifactId>
+ <version>3.0.0-M4-SNAPSHOT</version>
+ </parent>
+
+ <modelVersion>4.0.0</modelVersion>
+ <groupId>org.cytoscape.gui-distribution</groupId>
+ <artifactId>startlevel-32</artifactId>
+
+ <packaging>pom</packaging>
+
+ <name>StartLevel 32 Bundles</name>
+
+ <build>
+ <plugins>
+ <plugin>
+ <artifactId>maven-dependency-plugin</artifactId>
+ </plugin>
+ </plugins>
+ </build>
+
+ <dependencies>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>application-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ </dependencies>
+
+</project>
Added: core3/gui-distribution/branches/no-spring/startlevel-35/pom.xml
===================================================================
--- core3/gui-distribution/branches/no-spring/startlevel-35/pom.xml
(rev 0)
+++ core3/gui-distribution/branches/no-spring/startlevel-35/pom.xml
2011-09-16 23:11:35 UTC (rev 26848)
@@ -0,0 +1,43 @@
+<project xmlns="http://maven.apache.org/POM/4.0.0";
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance";
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0
http://maven.apache.org/maven-v4_0_0.xsd";>
+
+ <parent>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>gui-distribution</artifactId>
+ <version>3.0.0-M4-SNAPSHOT</version>
+ </parent>
+
+ <modelVersion>4.0.0</modelVersion>
+ <groupId>org.cytoscape.gui-distribution</groupId>
+ <artifactId>startlevel-35</artifactId>
+
+ <packaging>pom</packaging>
+
+ <name>StartLevel 35 Bundles</name>
+
+ <build>
+ <plugins>
+ <plugin>
+ <artifactId>maven-dependency-plugin</artifactId>
+ </plugin>
+ </plugins>
+ </build>
+
+ <dependencies>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>session-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>io-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+
<artifactId>ding-customgraphics-manager-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ </dependencies>
+
+</project>
Added: core3/gui-distribution/branches/no-spring/startlevel-40/pom.xml
===================================================================
--- core3/gui-distribution/branches/no-spring/startlevel-40/pom.xml
(rev 0)
+++ core3/gui-distribution/branches/no-spring/startlevel-40/pom.xml
2011-09-16 23:11:35 UTC (rev 26848)
@@ -0,0 +1,38 @@
+<project xmlns="http://maven.apache.org/POM/4.0.0";
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance";
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0
http://maven.apache.org/maven-v4_0_0.xsd";>
+
+ <parent>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>gui-distribution</artifactId>
+ <version>3.0.0-M4-SNAPSHOT</version>
+ </parent>
+
+ <modelVersion>4.0.0</modelVersion>
+ <groupId>org.cytoscape.gui-distribution</groupId>
+ <artifactId>startlevel-40</artifactId>
+
+ <packaging>pom</packaging>
+
+ <name>StartLevel 40 Bundles</name>
+
+ <build>
+ <plugins>
+ <plugin>
+ <artifactId>maven-dependency-plugin</artifactId>
+ </plugin>
+ </plugins>
+ </build>
+
+ <dependencies>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>core-task-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>ding-presentation-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ </dependencies>
+
+</project>
Added: core3/gui-distribution/branches/no-spring/startlevel-42/pom.xml
===================================================================
--- core3/gui-distribution/branches/no-spring/startlevel-42/pom.xml
(rev 0)
+++ core3/gui-distribution/branches/no-spring/startlevel-42/pom.xml
2011-09-16 23:11:35 UTC (rev 26848)
@@ -0,0 +1,33 @@
+<project xmlns="http://maven.apache.org/POM/4.0.0";
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance";
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0
http://maven.apache.org/maven-v4_0_0.xsd";>
+
+ <parent>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>gui-distribution</artifactId>
+ <version>3.0.0-M4-SNAPSHOT</version>
+ </parent>
+
+ <modelVersion>4.0.0</modelVersion>
+ <groupId>org.cytoscape.gui-distribution</groupId>
+ <artifactId>startlevel-42</artifactId>
+
+ <packaging>pom</packaging>
+
+ <name>StartLevel 42 Bundles</name>
+
+ <build>
+ <plugins>
+ <plugin>
+ <artifactId>maven-dependency-plugin</artifactId>
+ </plugin>
+ </plugins>
+ </build>
+
+ <dependencies>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>swing-application-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ </dependencies>
+
+</project>
Added: core3/gui-distribution/branches/no-spring/startlevel-43/pom.xml
===================================================================
--- core3/gui-distribution/branches/no-spring/startlevel-43/pom.xml
(rev 0)
+++ core3/gui-distribution/branches/no-spring/startlevel-43/pom.xml
2011-09-16 23:11:35 UTC (rev 26848)
@@ -0,0 +1,33 @@
+<project xmlns="http://maven.apache.org/POM/4.0.0";
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance";
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0
http://maven.apache.org/maven-v4_0_0.xsd";>
+
+ <parent>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>gui-distribution</artifactId>
+ <version>3.0.0-M4-SNAPSHOT</version>
+ </parent>
+
+ <modelVersion>4.0.0</modelVersion>
+ <groupId>org.cytoscape.gui-distribution</groupId>
+ <artifactId>startlevel-43</artifactId>
+
+ <packaging>pom</packaging>
+
+ <name>StartLevel 43 Bundles</name>
+
+ <build>
+ <plugins>
+ <plugin>
+ <artifactId>maven-dependency-plugin</artifactId>
+ </plugin>
+ </plugins>
+ </build>
+
+ <dependencies>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>biopax-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ </dependencies>
+
+</project>
Added: core3/gui-distribution/branches/no-spring/startlevel-45/pom.xml
===================================================================
--- core3/gui-distribution/branches/no-spring/startlevel-45/pom.xml
(rev 0)
+++ core3/gui-distribution/branches/no-spring/startlevel-45/pom.xml
2011-09-16 23:11:35 UTC (rev 26848)
@@ -0,0 +1,125 @@
+<project xmlns="http://maven.apache.org/POM/4.0.0";
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance";
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0
http://maven.apache.org/maven-v4_0_0.xsd";>
+
+ <parent>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>gui-distribution</artifactId>
+ <version>3.0.0-M4-SNAPSHOT</version>
+ </parent>
+
+ <modelVersion>4.0.0</modelVersion>
+ <groupId>org.cytoscape.gui-distribution</groupId>
+ <artifactId>startlevel-45</artifactId>
+
+ <packaging>pom</packaging>
+
+ <name>StartLevel 45 Bundles</name>
+
+ <build>
+ <plugins>
+ <plugin>
+ <artifactId>maven-dependency-plugin</artifactId>
+ </plugin>
+ </plugins>
+ </build>
+
+ <dependencies>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>search-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>table-browser-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>vizmap-gui-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>log-swing-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>manual-layout-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>layout-cytoscape-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>webservice-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>editor-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>layout-prefuse-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>linkout-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>psi-mi-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>network-analyzer-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>table-import-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>webservice-biomart-client-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>webservice-ncbi-client-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>filter-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>sbml-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>cpath2-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>network-merge-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ </dependencies>
+
+</project>
Added: core3/gui-distribution/branches/no-spring/startlevel-50/pom.xml
===================================================================
--- core3/gui-distribution/branches/no-spring/startlevel-50/pom.xml
(rev 0)
+++ core3/gui-distribution/branches/no-spring/startlevel-50/pom.xml
2011-09-16 23:11:35 UTC (rev 26848)
@@ -0,0 +1,33 @@
+<project xmlns="http://maven.apache.org/POM/4.0.0";
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance";
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0
http://maven.apache.org/maven-v4_0_0.xsd";>
+
+ <parent>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>gui-distribution</artifactId>
+ <version>3.0.0-M4-SNAPSHOT</version>
+ </parent>
+
+ <modelVersion>4.0.0</modelVersion>
+ <groupId>org.cytoscape.gui-distribution</groupId>
+ <artifactId>startlevel-50</artifactId>
+
+ <packaging>pom</packaging>
+
+ <name>StartLevel 50 Bundles</name>
+
+ <build>
+ <plugins>
+ <plugin>
+ <artifactId>maven-dependency-plugin</artifactId>
+ </plugin>
+ </plugins>
+ </build>
+
+ <dependencies>
+ <dependency>
+ <groupId>org.cytoscape</groupId>
+ <artifactId>plugin-impl</artifactId>
+ <version>${cytoscape.impl.version}</version>
+ </dependency>
+ </dependencies>
+
+</project>
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