Author: rodche
Date: 2011-10-04 11:34:11 -0700 (Tue, 04 Oct 2011)
New Revision: 27049
Modified:
core3/impl/branches/blueprint/biopax-impl/pom.xml
core3/impl/branches/blueprint/biopax-impl/src/main/java/org/cytoscape/biopax/internal/MapBioPaxToCytoscapeImpl.java
Log:
using paxtools v4.0.0b3 modules
Modified: core3/impl/branches/blueprint/biopax-impl/pom.xml
===================================================================
--- core3/impl/branches/blueprint/biopax-impl/pom.xml 2011-10-04 17:03:01 UTC
(rev 27048)
+++ core3/impl/branches/blueprint/biopax-impl/pom.xml 2011-10-04 18:34:11 UTC
(rev 27049)
@@ -48,7 +48,7 @@
<dependency>
<groupId>cytoscape-temp</groupId>
<artifactId>paxtools-core</artifactId>
- <version>4.0.0</version>
+ <version>4.0.0b3</version>
</dependency>
<dependency>
<groupId>cytoscape-temp</groupId>
@@ -73,7 +73,7 @@
<dependency>
<groupId>cytoscape-temp</groupId>
<artifactId>biopax-converter</artifactId>
- <version>4.0.0</version>
+ <version>4.0.0b3</version>
</dependency>
</dependencies>
Modified:
core3/impl/branches/blueprint/biopax-impl/src/main/java/org/cytoscape/biopax/internal/MapBioPaxToCytoscapeImpl.java
===================================================================
---
core3/impl/branches/blueprint/biopax-impl/src/main/java/org/cytoscape/biopax/internal/MapBioPaxToCytoscapeImpl.java
2011-10-04 17:03:01 UTC (rev 27048)
+++
core3/impl/branches/blueprint/biopax-impl/src/main/java/org/cytoscape/biopax/internal/MapBioPaxToCytoscapeImpl.java
2011-10-04 18:34:11 UTC (rev 27049)
@@ -188,7 +188,7 @@
AttributeUtil.set(network, CyNetwork.NAME, networkName,
String.class);
// an attribute which indicates this network is a BioPAX network
- AttributeUtil.set(network,
MapBioPaxToCytoscapeImpl.BIOPAX_NETWORK, Boolean.TRUE, Boolean.class);
+ AttributeUtil.set(network, MapBioPaxToCytoscape.BIOPAX_NETWORK,
Boolean.TRUE, Boolean.class);
// default Quick Find Index
AttributeUtil.set(network, "quickfind.default_index",
CyNode.NAME, String.class);
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