Author: pwang
Date: 2011-10-29 12:05:06 -0700 (Sat, 29 Oct 2011)
New Revision: 27340
Modified:
csplugins/trunk/ucsd/ruschein/PanGIA-impl/src/main/java/org/idekerlab/PanGIAPlugin/PanGIAPlugin.java
Log:
minor change
Modified:
csplugins/trunk/ucsd/ruschein/PanGIA-impl/src/main/java/org/idekerlab/PanGIAPlugin/PanGIAPlugin.java
===================================================================
---
csplugins/trunk/ucsd/ruschein/PanGIA-impl/src/main/java/org/idekerlab/PanGIAPlugin/PanGIAPlugin.java
2011-10-29 18:21:26 UTC (rev 27339)
+++
csplugins/trunk/ucsd/ruschein/PanGIA-impl/src/main/java/org/idekerlab/PanGIAPlugin/PanGIAPlugin.java
2011-10-29 19:05:06 UTC (rev 27340)
@@ -24,6 +24,10 @@
import org.idekerlab.PanGIAPlugin.utilities.files.FileUtil;
import org.cytoscape.model.CyNetwork;
+import org.cytoscape.model.CyNode;
+import org.cytoscape.task.AbstractNodeViewTaskFactory;
+import org.cytoscape.task.NodeViewTaskFactory;
+import org.cytoscape.view.model.View;
import org.cytoscape.view.model.events.NetworkViewAddedEvent;
//import cytoscape.view.CyHelpBroker;
//import cytoscape.view.cytopanels.CytoPanel;
@@ -38,11 +42,14 @@
import org.cytoscape.view.model.events.NetworkViewAddedListener;
import org.cytoscape.view.model.events.NetworkViewDestroyedEvent;
import org.cytoscape.view.model.events.NetworkViewDestroyedListener;
+import org.cytoscape.work.AbstractTask;
+import org.cytoscape.work.TaskIterator;
+import org.cytoscape.work.TaskMonitor;
import org.cytoscape.model.events.NetworkDestroyedListener;
import org.cytoscape.model.events.NetworkDestroyedEvent;
+import org.cytoscape.view.model.CyNetworkView;
-
/**
* PanGIA Plugin main class.
*
@@ -73,6 +80,17 @@
this.searchPanel = searchPanel;
cytoPanelWest =
ServicesUtil.cySwingApplicationServiceRef.getCytoPanel(CytoPanelName.WEST);
+
+// // Node right-click menu
+// Dictionary<String, String> dict = new Hashtable<String,
String>();
+// dict.put("preferredMenu", "PanGIA");
+//
+// NodeViewTaskFactory nvtf = new PanGIANodeViewTaskFactory();
+// ServicesUtil.cyServiceRegistrarServiceRef.registerService(nvtf,
NodeViewTaskFactory.class, dict);
+//
+// // Edge right-click menu
+
+
addHelp();
}
@@ -228,18 +246,11 @@
//
public void handleEvent(NetworkViewAddedEvent e){
-// final CyNetworkView view = (CyNetworkView) event.getNewValue();
- //
-// // Node right-click menu
-// final PanGIANodeContextMenuListener
nodeMenuListener = new PanGIANodeContextMenuListener(view);
-//
Cytoscape.getCurrentNetworkView().addNodeContextMenuListener(nodeMenuListener);
-//
-// // Edge right-click menu
-// final PanGIAEdgeContextMenuListener
edgeMenuListener = new PanGIAEdgeContextMenuListener(view);
-//
Cytoscape.getCurrentNetworkView().addEdgeContextMenuListener(edgeMenuListener);
+
}
+
public void handleEvent(NetworkDestroyedEvent e){
// {
// CyNetwork net = Cytoscape.getNetwork((String)event.getNewValue());
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