Author: mkirby
Date: 2011-11-03 23:24:47 -0700 (Thu, 03 Nov 2011)
New Revision: 27399

Modified:
   
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractEdgeViewTask.java
   
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractEdgeViewTaskFactory.java
   
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNetworkCollectionTask.java
   
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNetworkCollectionTaskFactory.java
   
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNetworkTask.java
   
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNetworkTaskFactory.java
   
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNetworkViewCollectionTask.java
   
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNetworkViewCollectionTaskFactory.java
   
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNetworkViewTask.java
   
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNetworkViewTaskFactory.java
   
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNodeViewTask.java
   
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNodeViewTaskFactory.java
   
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractRowTask.java
   
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractRowTaskFactory.java
   
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractTableCellTask.java
   
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractTableCellTaskFactory.java
   
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractTableColumnTask.java
   
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractTableTask.java
   
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractTableTaskFactory.java
   
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/EdgeViewTaskFactory.java
   
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/MapNetworkAttrTask.java
   
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/NetworkCollectionTaskFactory.java
   
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/NetworkTaskFactory.java
   
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/NetworkViewCollectionTaskFactory.java
   
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/NetworkViewTaskFactory.java
   
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/NodeViewTaskFactory.java
   
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/RowTaskFactory.java
   
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/TableCellTaskFactory.java
   
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/TableColumnTaskFactory.java
   
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/TableTaskFactory.java
   
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/creation/NewEmptyNetworkViewFactory.java
Log:
Fixed Javadoc.

Modified: 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractEdgeViewTask.java
===================================================================
--- 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractEdgeViewTask.java
    2011-11-03 22:15:22 UTC (rev 27398)
+++ 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractEdgeViewTask.java
    2011-11-04 06:24:47 UTC (rev 27399)
@@ -35,6 +35,7 @@
 
 /** 
  * The base class for all tasks that need to operate on an edge view and 
possibly its associated network view.
+ * @CyAPI.Abstract.Class
  */
 public abstract class AbstractEdgeViewTask extends AbstractTask {
        /** The edge view that descendant tasks will operate on. */

Modified: 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractEdgeViewTaskFactory.java
===================================================================
--- 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractEdgeViewTaskFactory.java
     2011-11-03 22:15:22 UTC (rev 27398)
+++ 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractEdgeViewTaskFactory.java
     2011-11-04 06:24:47 UTC (rev 27399)
@@ -35,6 +35,7 @@
 /** 
  * Base class for all task factories that create tasks that need to be 
provisioned with an edge view
  *  and its associated network view.
+ *  @CyAPI.Abstract.Class
  */
 public abstract class AbstractEdgeViewTaskFactory implements 
EdgeViewTaskFactory {
        /** The network view passed into any task constructed by this factory. 
*/

Modified: 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNetworkCollectionTask.java
===================================================================
--- 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNetworkCollectionTask.java
   2011-11-03 22:15:22 UTC (rev 27398)
+++ 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNetworkCollectionTask.java
   2011-11-04 06:24:47 UTC (rev 27399)
@@ -37,6 +37,7 @@
 
 /** 
  * The base class for all tasks that need to operate on a Collection of {@link 
CyNetwork}s.
+ * @CyAPI.Abstract.Class
  */
 public abstract class AbstractNetworkCollectionTask extends AbstractTask {
        /** The collection of networks that descendants will operate on. */

Modified: 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNetworkCollectionTaskFactory.java
===================================================================
--- 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNetworkCollectionTaskFactory.java
    2011-11-03 22:15:22 UTC (rev 27398)
+++ 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNetworkCollectionTaskFactory.java
    2011-11-04 06:24:47 UTC (rev 27399)
@@ -38,6 +38,7 @@
 /** 
  * Base class for all task factories that create tasks that need to be 
provisioned with a Collection
  * of {@link CyNetwork}s.
+ * @CyAPI.Abstract.Class
  */
 public abstract class AbstractNetworkCollectionTaskFactory implements 
NetworkCollectionTaskFactory {
        /** The collection of networks that will be passed to any task 
constructed by descendants of this factory. */

Modified: 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNetworkTask.java
===================================================================
--- 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNetworkTask.java
     2011-11-03 22:15:22 UTC (rev 27398)
+++ 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNetworkTask.java
     2011-11-04 06:24:47 UTC (rev 27399)
@@ -33,7 +33,9 @@
 import org.cytoscape.model.CyRow;
 import org.cytoscape.work.AbstractTask;
 
-/** Base class for all tasks that need to operate on a {@link CyNetwork}. */
+/** Base class for all tasks that need to operate on a {@link CyNetwork}. 
+ * @CyAPI.Abstract.Class
+ */
 public abstract class AbstractNetworkTask extends AbstractTask {
 
     /**

Modified: 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNetworkTaskFactory.java
===================================================================
--- 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNetworkTaskFactory.java
      2011-11-03 22:15:22 UTC (rev 27398)
+++ 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNetworkTaskFactory.java
      2011-11-04 06:24:47 UTC (rev 27399)
@@ -33,6 +33,7 @@
 
 /** 
  * Base class for all task factories that create tasks that need to be 
provisioned with a network view.
+ * @CyAPI.Abstract.Class
  */
 public abstract class AbstractNetworkTaskFactory implements NetworkTaskFactory 
{
 

Modified: 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNetworkViewCollectionTask.java
===================================================================
--- 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNetworkViewCollectionTask.java
       2011-11-03 22:15:22 UTC (rev 27398)
+++ 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNetworkViewCollectionTask.java
       2011-11-04 06:24:47 UTC (rev 27399)
@@ -35,6 +35,7 @@
 
 /** 
  * The base class for all tasks that need to operate on a Collection of {@link 
CyNetworkView}s.
+ * @CyAPI.Abstract.Class
  */
 public abstract class AbstractNetworkViewCollectionTask extends AbstractTask {
        /** A collection of network views to operate on for any descendants of 
this class. */

Modified: 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNetworkViewCollectionTaskFactory.java
===================================================================
--- 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNetworkViewCollectionTaskFactory.java
        2011-11-03 22:15:22 UTC (rev 27398)
+++ 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNetworkViewCollectionTaskFactory.java
        2011-11-04 06:24:47 UTC (rev 27399)
@@ -34,6 +34,7 @@
 /** 
  * Base class for all task factories that create tasks that need to be 
provisioned with a Collection
  * of {@link CyNetworkView}s.
+ * @CyAPI.Abstract.Class
  */
 public abstract class AbstractNetworkViewCollectionTaskFactory implements 
NetworkViewCollectionTaskFactory {
        /** The collection of network views to be passed into any tasks 
constructed by descendants of this class. */

Modified: 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNetworkViewTask.java
===================================================================
--- 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNetworkViewTask.java
 2011-11-03 22:15:22 UTC (rev 27398)
+++ 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNetworkViewTask.java
 2011-11-04 06:24:47 UTC (rev 27399)
@@ -34,6 +34,7 @@
 import org.cytoscape.work.AbstractTask;
 
 /** The base class for all tasks that need to operate on a network view.
+ * @CyAPI.Abstract.Class
  */
 public abstract class AbstractNetworkViewTask extends AbstractTask {
        /** The network view that descendants of this class will operate on. */

Modified: 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNetworkViewTaskFactory.java
===================================================================
--- 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNetworkViewTaskFactory.java
  2011-11-03 22:15:22 UTC (rev 27398)
+++ 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNetworkViewTaskFactory.java
  2011-11-04 06:24:47 UTC (rev 27399)
@@ -33,13 +33,15 @@
 import org.cytoscape.view.model.CyNetworkView;
 
 
-/** Base class for all task factories that need to create tasks that will be 
provisioned with a network view. */
+/** Base class for all task factories that need to create tasks that will be 
provisioned with a network view. 
+ * @CyAPI.Abstract.Class
+ */
 public abstract class AbstractNetworkViewTaskFactory implements 
NetworkViewTaskFactory {
-       /** The newtork view that will be passed into any tasks are are being 
created by descendents of this class. */
+       /** The network view that will be passed into any tasks are are being 
created by descendants of this class. */
        protected CyNetworkView view; // TODO: should be renamed to networkView
 
-       /** Provides this class and its descendents with the network view that 
will be passed into
-        *  any tasks created by descendents of this class.
+       /** Provides this class and its descendants with the network view that 
will be passed into
+        *  any tasks created by descendants of this class.
         *  @param view  must be a non-null network view
         */
        public void setNetworkView(final CyNetworkView view) {

Modified: 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNodeViewTask.java
===================================================================
--- 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNodeViewTask.java
    2011-11-03 22:15:22 UTC (rev 27398)
+++ 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNodeViewTask.java
    2011-11-04 06:24:47 UTC (rev 27399)
@@ -35,16 +35,17 @@
 
 
 /** The base class for all tasks that need to operate on a node view and 
possibly its associated network view.
+ * @CyAPI.Abstract.Class
  */
 public abstract class AbstractNodeViewTask extends AbstractTask {
-       /** The node view that descendents of this class will operate on. */
+       /** The node view that descendants of this class will operate on. */
        final protected View<CyNode> nodeView;
 
-       /** The network view that descendents of this class will operate on. */
+       /** The network view that descendants of this class will operate on. */
        final protected CyNetworkView netView;
 
        /** Base class constructor for all tasks that need to operate on a node 
view and possibly its associated network view.
-        *  @param nodeView  a non-null node view that descendents of this 
class will operate on
+        *  @param nodeView  a non-null node view that descendants of this 
class will operate on
         *  @param netView   the non-null network that is associated with 
{@link #nodeView}
         */
        public AbstractNodeViewTask(final View<CyNode> nodeView, final 
CyNetworkView netView) {

Modified: 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNodeViewTaskFactory.java
===================================================================
--- 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNodeViewTaskFactory.java
     2011-11-03 22:15:22 UTC (rev 27398)
+++ 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractNodeViewTaskFactory.java
     2011-11-04 06:24:47 UTC (rev 27399)
@@ -35,15 +35,16 @@
 
 /** Base class for all task factories that create tasks that need to be 
provisioned with a node view
  *  and its associated network view.
+ *  @CyAPI.Abstract.Class
  */
 public abstract class AbstractNodeViewTaskFactory implements 
NodeViewTaskFactory {
-       /** The network view that will be used to provision tasks that are 
being created by descendents of this class. */
+       /** The network view that will be used to provision tasks that are 
being created by descendants of this class. */
        protected CyNetworkView netView; // TODO: should be renamed to 
networkView
 
-       /** The node view that will be used to provision tasks that are being 
created by descendents of this class. */
+       /** The node view that will be used to provision tasks that are being 
created by descendants of this class. */
        protected View<CyNode> nodeView;
 
-       /** Provisions descendents of this class with a node view and its 
associated network view
+       /** Provisions descendants of this class with a node view and its 
associated network view
         *  that will be used to pass to created tasks.
         *  @param nodeView  a non-null node view
         *  @param netView   the non-null network view associated with {@link 
#nodeView}

Modified: 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractRowTask.java
===================================================================
--- 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractRowTask.java
 2011-11-03 22:15:22 UTC (rev 27398)
+++ 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractRowTask.java
 2011-11-04 06:24:47 UTC (rev 27399)
@@ -32,7 +32,9 @@
 import org.cytoscape.work.AbstractTask;
 
 
-/** Base class for all tasks that need to operate on a {@link CyRow}. */
+/** Base class for all tasks that need to operate on a {@link CyRow}. 
+ * @CyAPI.Abstract.Class
+ */
 public abstract class AbstractRowTask extends AbstractTask {
        /** The row that descendants will operate on. */
        final protected CyRow row;

Modified: 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractRowTaskFactory.java
===================================================================
--- 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractRowTaskFactory.java
  2011-11-03 22:15:22 UTC (rev 27398)
+++ 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractRowTaskFactory.java
  2011-11-04 06:24:47 UTC (rev 27399)
@@ -31,9 +31,11 @@
 import org.cytoscape.model.CyRow;
 
 
-/** Base class for all task factories that need to create tasks that have been 
provisioned with a {@link CyRow}. */
+/** Base class for all task factories that need to create tasks that have been 
provisioned with a {@link CyRow}. 
+ * @CyAPI.Abstract.Class
+ */
 public abstract class AbstractRowTaskFactory implements RowTaskFactory {
-       /** The CyRow that will be passed into any task that will be created by 
descendents of this class. */
+       /** The CyRow that will be passed into any task that will be created by 
descendants of this class. */
        protected CyRow row;
 
        /** Used to provision this class with a {@link CyRow} that will be 
passed into any task

Modified: 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractTableCellTask.java
===================================================================
--- 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractTableCellTask.java
   2011-11-03 22:15:22 UTC (rev 27398)
+++ 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractTableCellTask.java
   2011-11-04 06:24:47 UTC (rev 27399)
@@ -32,7 +32,9 @@
 import org.cytoscape.work.AbstractTask;
 
 
-/** A base class for Tasks that need to operate on a single CyTable cell. */
+/** A base class for Tasks that need to operate on a single CyTable cell. 
+ * @CyAPI.Abstract.Class
+ */
 public abstract class AbstractTableCellTask extends AbstractTask {
        /** The {@link CyColumn} of the {@link org.cytoscape.model.CyTable} 
cell */
        protected final CyColumn column;

Modified: 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractTableCellTaskFactory.java
===================================================================
--- 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractTableCellTaskFactory.java
    2011-11-03 22:15:22 UTC (rev 27398)
+++ 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractTableCellTaskFactory.java
    2011-11-04 06:24:47 UTC (rev 27399)
@@ -35,6 +35,7 @@
 /**
  * The assumption is that setColumnAndPrimaryKey() will be called before 
getTask() and that the Task
  * in question operates on the specified table entry identified by the column 
and primary key value.'
+ * @CyAPI.Abstract.Class
  */
 abstract public class AbstractTableCellTaskFactory implements 
TableCellTaskFactory {
        /** The {@link CyColumn} of the cell that will be used to provision 
tasks that are being created by descendants 

Modified: 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractTableColumnTask.java
===================================================================
--- 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractTableColumnTask.java
 2011-11-03 22:15:22 UTC (rev 27398)
+++ 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractTableColumnTask.java
 2011-11-04 06:24:47 UTC (rev 27399)
@@ -32,7 +32,9 @@
 import org.cytoscape.work.AbstractTask;
 
 
-/** A base class for Tasks that need to operate on an entire CyTable column. */
+/** A base class for Tasks that need to operate on an entire CyTable column. 
+ * @CyAPI.Abstract.Class
+ */
 public abstract class AbstractTableColumnTask extends AbstractTask {
        
        /** The {@link CyColumn} that descendants will operate on. */

Modified: 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractTableTask.java
===================================================================
--- 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractTableTask.java
       2011-11-03 22:15:22 UTC (rev 27398)
+++ 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractTableTask.java
       2011-11-04 06:24:47 UTC (rev 27399)
@@ -32,13 +32,15 @@
 import org.cytoscape.work.AbstractTask;
 
 
-/** A base class for Tasks that need to operate on an entire CyTable. */
+/** A base class for Tasks that need to operate on an entire {@link CyTable}. 
+ * @CyAPI.Abstract.Class
+ */
 public abstract class AbstractTableTask extends AbstractTask {
        
        /** The table that descendants of this class will operate on. */
        protected final CyTable table;
        
-       /** Initializes a Task that needs to operate on a CyTable.
+       /** Initializes a Task that needs to operate on a {@link CyTable}.
         *  @param table  a non-null CyTable
         */
        public AbstractTableTask(CyTable table) {

Modified: 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractTableTaskFactory.java
===================================================================
--- 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractTableTaskFactory.java
        2011-11-03 22:15:22 UTC (rev 27398)
+++ 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/AbstractTableTaskFactory.java
        2011-11-04 06:24:47 UTC (rev 27399)
@@ -32,6 +32,7 @@
 
 /** 
  * Base class for all task factories that create tasks that need to be 
provisioned with a {@link CyTable}.
+ * @CyAPI.Abstract.Class
  */
 public abstract class AbstractTableTaskFactory implements TableTaskFactory {
        /** The table that will be passed into any Task constructor.

Modified: 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/EdgeViewTaskFactory.java
===================================================================
--- 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/EdgeViewTaskFactory.java
     2011-11-03 22:15:22 UTC (rev 27398)
+++ 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/EdgeViewTaskFactory.java
     2011-11-04 06:24:47 UTC (rev 27399)
@@ -38,6 +38,7 @@
  * The assumption is that setEdgeView() will be called before
  * getTask() and that the Task in question operates on the 
  * specified View&lt;CyEdge&gt;.
+ * @CyAPI.Spi.Interface
  */
 public interface EdgeViewTaskFactory extends TaskFactory {
        /** Used to provision this factory with the edge view and associated 
network view that will

Modified: 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/MapNetworkAttrTask.java
===================================================================
--- 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/MapNetworkAttrTask.java
      2011-11-03 22:15:22 UTC (rev 27398)
+++ 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/MapNetworkAttrTask.java
      2011-11-04 06:24:47 UTC (rev 27399)
@@ -15,13 +15,17 @@
 import org.cytoscape.work.AbstractTask;
 import org.cytoscape.work.TaskMonitor;
 import org.cytoscape.work.Tunable;
-
+
 /** 
- * This is a simple {@link Task} that will take a loaded table and ask whether
+ * This is a simple {@link org.cytoscape.work.Task} that will take a loaded 
table and ask whether
  * the columns in the new table should become virtual columns in the node or
  * edge table of the current network, all networks, or no networks.
- */
+ * @CyAPI.Final.Class
+ */
 public final class MapNetworkAttrTask extends AbstractTask {
+       /**
+        * If true map to current network only.
+        */
        @Tunable(description="Map to current network only")
        public boolean currentNetworkOnly = true;
 
@@ -57,7 +61,7 @@
 
        
        /**
-        * Constructor. Will attempt to map existing tables based on the {@link 
CyTableEntry.NAME}
+        * Constructor. Will attempt to map existing tables based on the {@link 
CyTableEntry#NAME}
         * column.
         * @param type The type of table to map to, either CyNode.class or 
CyEdge.class.
         * @param newGlobalTable The table to be mapped. 

Modified: 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/NetworkCollectionTaskFactory.java
===================================================================
--- 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/NetworkCollectionTaskFactory.java
    2011-11-03 22:15:22 UTC (rev 27398)
+++ 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/NetworkCollectionTaskFactory.java
    2011-11-04 06:24:47 UTC (rev 27399)
@@ -37,6 +37,7 @@
  * The assumption is that setNetworkCollection() will be called before
  * getTask() and that the Task in question operates on the 
  * specified CyNetworks. 
+ * @CyAPI.Spi.Interface
  */
 public interface NetworkCollectionTaskFactory extends TaskFactory {
        /** Provisions this factory with the collection of networks that will 
be passed into any task

Modified: 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/NetworkTaskFactory.java
===================================================================
--- 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/NetworkTaskFactory.java
      2011-11-03 22:15:22 UTC (rev 27398)
+++ 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/NetworkTaskFactory.java
      2011-11-04 06:24:47 UTC (rev 27399)
@@ -33,6 +33,7 @@
 /**
  * The assumption is that setNetwork() will be called before getTask() and that
  * the Task in question operates on the specified CyNetwork.
+ * @CyAPI.Spi.Interface
  */
 public interface NetworkTaskFactory extends TaskFactory {
 

Modified: 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/NetworkViewCollectionTaskFactory.java
===================================================================
--- 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/NetworkViewCollectionTaskFactory.java
        2011-11-03 22:15:22 UTC (rev 27398)
+++ 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/NetworkViewCollectionTaskFactory.java
        2011-11-04 06:24:47 UTC (rev 27399)
@@ -37,6 +37,7 @@
  * The assumption is that setNetworkViewCollection() will be called before
  * getTask() and that the Task in question operates on the 
  * specified CyNetworks. 
+ * @CyAPI.Spi.Interface
  */
 public interface NetworkViewCollectionTaskFactory extends TaskFactory {
        /** Provisions this factory with the collection of network views that 
will be passed into

Modified: 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/NetworkViewTaskFactory.java
===================================================================
--- 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/NetworkViewTaskFactory.java
  2011-11-03 22:15:22 UTC (rev 27398)
+++ 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/NetworkViewTaskFactory.java
  2011-11-04 06:24:47 UTC (rev 27399)
@@ -36,6 +36,7 @@
  * The assumption is that setNetworkView() will be called before
  * getTask() and that the Task in question operates on the 
  * specified CyNetworkView. 
+ * @CyAPI.Spi.Interface
  */
 public interface NetworkViewTaskFactory extends TaskFactory {
        /** Provisions this factory with a {@link CyNetworkView} that will be 
passed into any tasks

Modified: 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/NodeViewTaskFactory.java
===================================================================
--- 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/NodeViewTaskFactory.java
     2011-11-03 22:15:22 UTC (rev 27398)
+++ 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/NodeViewTaskFactory.java
     2011-11-04 06:24:47 UTC (rev 27399)
@@ -38,6 +38,7 @@
  * The assumption is that setNodeView() will be called before
  * getTask() and that the Task in question operates on the 
  * specified View&lt;CyNode&gt;.
+ * @CyAPI.Spi.Interface
  */
 public interface NodeViewTaskFactory extends TaskFactory {
        /** Provisions this factory with the node view and its associated 
network view, both of

Modified: 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/RowTaskFactory.java
===================================================================
--- 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/RowTaskFactory.java
  2011-11-03 22:15:22 UTC (rev 27398)
+++ 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/RowTaskFactory.java
  2011-11-04 06:24:47 UTC (rev 27399)
@@ -36,6 +36,7 @@
  * The assumption is that setRow() will be called before
  * getTask() and that the Task in question operates on the 
  * specified CyNetwork. 
+ * @CyAPI.Spi.Interface
  */
 public interface RowTaskFactory extends TaskFactory {
        /** Provisions this factory with the {@link CyRow} that will be passed 
into any task created

Modified: 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/TableCellTaskFactory.java
===================================================================
--- 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/TableCellTaskFactory.java
    2011-11-03 22:15:22 UTC (rev 27398)
+++ 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/TableCellTaskFactory.java
    2011-11-04 06:24:47 UTC (rev 27399)
@@ -34,7 +34,8 @@
 
 /**
  * The assumption is that setColumnAndPrimaryKey() will be called before 
getTask() and that the Task
- * in question operates on the specified table entry identified by the column 
and primary key value.'
+ * in question operates on the specified table entry identified by the column 
and primary key value.
+ * @CyAPI.Spi.Interface
  */
 public interface TableCellTaskFactory extends TaskFactory {
        /** Used to provision this factory with a {@link CyColumn} and a 
primary key that will be

Modified: 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/TableColumnTaskFactory.java
===================================================================
--- 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/TableColumnTaskFactory.java
  2011-11-03 22:15:22 UTC (rev 27398)
+++ 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/TableColumnTaskFactory.java
  2011-11-04 06:24:47 UTC (rev 27399)
@@ -35,6 +35,7 @@
 /**
  * The assumption is that setColumn() will be called before getTask() and that 
the Task in question
  * operates on the specified CyColumn. 
+ * @CyAPI.Spi.Interface
  */
 public interface TableColumnTaskFactory extends TaskFactory {
        /** Used to provision this factory with a {@link CyColumn} that will be 
used to create tasks.

Modified: 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/TableTaskFactory.java
===================================================================
--- 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/TableTaskFactory.java
        2011-11-03 22:15:22 UTC (rev 27398)
+++ 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/TableTaskFactory.java
        2011-11-04 06:24:47 UTC (rev 27399)
@@ -35,6 +35,7 @@
 /**
  * The assumption is that setTable() will be called before getTask() and that 
the Task in question
  * operates on the specified CyTable. 
+ * @CyAPI.Spi.Interface
  */
 public interface TableTaskFactory extends TaskFactory {
        /** Used to provision this factory with a {@link CyTable} that will be 
used to create tasks.

Modified: 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/creation/NewEmptyNetworkViewFactory.java
===================================================================
--- 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/creation/NewEmptyNetworkViewFactory.java
     2011-11-03 22:15:22 UTC (rev 27398)
+++ 
core3/api/trunk/core-task-api/src/main/java/org/cytoscape/task/creation/NewEmptyNetworkViewFactory.java
     2011-11-04 06:24:47 UTC (rev 27399)
@@ -4,6 +4,7 @@
 
 /**
  * An interface for creating new, empty network views.
+ * @CyAPI.Spi.Interface
  */
 public interface NewEmptyNetworkViewFactory {
 

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