Author: rodche
Date: 2011-11-08 14:05:23 -0800 (Tue, 08 Nov 2011)
New Revision: 27433
Added:
core3/support/trunk/wrappers/org.biopax.paxtools.biopax-converter/
core3/support/trunk/wrappers/org.biopax.paxtools.biopax-converter/osgi.bnd
core3/support/trunk/wrappers/org.biopax.paxtools.biopax-converter/pom.xml
core3/support/trunk/wrappers/org.biopax.paxtools.core/
core3/support/trunk/wrappers/org.biopax.paxtools.core/osgi.bnd
core3/support/trunk/wrappers/org.biopax.paxtools.core/pom.xml
Modified:
core3/support/trunk/wrappers/pom.xml
Log:
Added bnd wrapper for two paxtools modules (used by biopax-impl and cpath2-impl
core plugins).
Added:
core3/support/trunk/wrappers/org.biopax.paxtools.biopax-converter/osgi.bnd
===================================================================
--- core3/support/trunk/wrappers/org.biopax.paxtools.biopax-converter/osgi.bnd
(rev 0)
+++ core3/support/trunk/wrappers/org.biopax.paxtools.biopax-converter/osgi.bnd
2011-11-08 22:05:23 UTC (rev 27433)
@@ -0,0 +1,9 @@
+#--------------------------------------------------------------------------
+# Use this file to add customized Bnd instructions for the wrapped library
+#--------------------------------------------------------------------------
+
+#
+# this unpacks the contents of the wrapped jar artifact inside the bundle
+# to also inline dependencies of this artifact add Embed-Transitive: true
+#
+Embed-Dependency: *;scope=compile|runtime;type=!pom;inline=true
Added: core3/support/trunk/wrappers/org.biopax.paxtools.biopax-converter/pom.xml
===================================================================
--- core3/support/trunk/wrappers/org.biopax.paxtools.biopax-converter/pom.xml
(rev 0)
+++ core3/support/trunk/wrappers/org.biopax.paxtools.biopax-converter/pom.xml
2011-11-08 22:05:23 UTC (rev 27433)
@@ -0,0 +1,62 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<project xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance";
xmlns="http://maven.apache.org/POM/4.0.0";
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0
http://maven.apache.org/maven-v4_0_0.xsd";>
+
+ <properties>
+
<bundle.symbolicName>org.biopax.paxtools.biopax-converter</bundle.symbolicName>
+ </properties>
+
+ <modelVersion>4.0.0</modelVersion>
+ <groupId>cytoscape-temp</groupId>
+ <artifactId>biopax-converter</artifactId>
+ <version>4.0.0b3</version>
+
+ <name>${bundle.symbolicName} ${version} [osgi]</name>
+
+ <packaging>bundle</packaging>
+
+ <dependencies>
+ <dependency>
+ <groupId>org.biopax.paxtools</groupId>
+ <artifactId>biopax-converter</artifactId>
+ <version>4.0.0b3</version>
+ </dependency>
+ </dependencies>
+
+ <build>
+ <plugins>
+ <plugin>
+ <groupId>org.apache.felix</groupId>
+ <artifactId>maven-bundle-plugin</artifactId>
+ <version>2.3.4</version>
+ <extensions>true</extensions>
+ <!--
+ | the following instructions are optimized for wrapping third-party
libraries as OSGi bundles
+ -->
+ <configuration>
+ <instructions>
+ <Bundle-SymbolicName>${bundle.symbolicName}</Bundle-SymbolicName>
+ <Bundle-Version>${version}</Bundle-Version>
+ <!--
+ | export wrapped contents: don't use Export-Package:* as this
bundles everything on the classpath
+ -->
+ <_exportcontents>*</_exportcontents>
+ <Import-Package>*;resolution:=optional</Import-Package>
+ <!--
+ | each module can override these defaults in their osgi.bnd file
+ -->
+ <_include>-osgi.bnd</_include>
+ </instructions>
+ </configuration>
+ </plugin>
+ </plugins>
+ </build>
+
+ <distributionManagement>
+ <repository>
+ <id>cy3.thirdparty</id>
+ <name>Cytoscape Third Party</name>
+
<url>http://code.cytoscape.org/nexus/content/repositories/thirdparty/</url>
+ </repository>
+ </distributionManagement>
+
+</project>
Added: core3/support/trunk/wrappers/org.biopax.paxtools.core/osgi.bnd
===================================================================
--- core3/support/trunk/wrappers/org.biopax.paxtools.core/osgi.bnd
(rev 0)
+++ core3/support/trunk/wrappers/org.biopax.paxtools.core/osgi.bnd
2011-11-08 22:05:23 UTC (rev 27433)
@@ -0,0 +1,9 @@
+#--------------------------------------------------------------------------
+# Use this file to add customized Bnd instructions for the wrapped library
+#--------------------------------------------------------------------------
+
+#
+# this unpacks the contents of the wrapped jar artifact inside the bundle
+# to also inline dependencies of this artifact add Embed-Transitive: true
+#
+Embed-Dependency: *;scope=compile|runtime;type=!pom;inline=true
Added: core3/support/trunk/wrappers/org.biopax.paxtools.core/pom.xml
===================================================================
--- core3/support/trunk/wrappers/org.biopax.paxtools.core/pom.xml
(rev 0)
+++ core3/support/trunk/wrappers/org.biopax.paxtools.core/pom.xml
2011-11-08 22:05:23 UTC (rev 27433)
@@ -0,0 +1,63 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<project xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance";
xmlns="http://maven.apache.org/POM/4.0.0";
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0
http://maven.apache.org/maven-v4_0_0.xsd";>
+
+ <properties>
+ <bundle.symbolicName>org.biopax.paxtools.core</bundle.symbolicName>
+ </properties>
+
+ <modelVersion>4.0.0</modelVersion>
+ <groupId>cytoscape-temp</groupId>
+ <artifactId>paxtools-core</artifactId>
+ <version>4.0.0b3</version>
+
+ <name>${bundle.symbolicName} ${version} [osgi]</name>
+
+ <packaging>bundle</packaging>
+
+ <dependencies>
+ <dependency>
+ <groupId>org.biopax.paxtools</groupId>
+ <artifactId>paxtools-core</artifactId>
+ <version>4.0.0b3</version>
+ </dependency>
+ </dependencies>
+
+ <build>
+ <plugins>
+ <plugin>
+ <groupId>org.apache.felix</groupId>
+ <artifactId>maven-bundle-plugin</artifactId>
+ <version>2.3.4</version>
+ <extensions>true</extensions>
+ <!--
+ | the following instructions are optimized for wrapping third-party
libraries as OSGi bundles
+ -->
+ <configuration>
+ <instructions>
+ <Bundle-SymbolicName>${bundle.symbolicName}</Bundle-SymbolicName>
+ <Bundle-Version>${version}</Bundle-Version>
+
<Private-Package>org.biopax.paxtools.impl.*,org.biopax.paxtools.impl</Private-Package>
+ <!--
+ | export wrapped contents: don't use Export-Package:* as this
bundles everything on the classpath
+ -->
+
<_exportcontents>!org.biopax.paxtools.impl.*,!org.biopax.paxtools.impl,*</_exportcontents>
+ <Import-Package>*;resolution:=optional</Import-Package>
+ <!--
+ | each module can override these defaults in their osgi.bnd file
+ -->
+ <_include>-osgi.bnd</_include>
+ </instructions>
+ </configuration>
+ </plugin>
+ </plugins>
+ </build>
+
+ <distributionManagement>
+ <repository>
+ <id>cy3.thirdparty</id>
+ <name>Cytoscape Third Party</name>
+
<url>http://code.cytoscape.org/nexus/content/repositories/thirdparty/</url>
+ </repository>
+ </distributionManagement>
+
+</project>
Modified: core3/support/trunk/wrappers/pom.xml
===================================================================
--- core3/support/trunk/wrappers/pom.xml 2011-11-08 19:54:41 UTC (rev
27432)
+++ core3/support/trunk/wrappers/pom.xml 2011-11-08 22:05:23 UTC (rev
27433)
@@ -17,5 +17,7 @@
<module>org.apache.lucene</module>
<module>org.swinglabs.swing-layout</module>
<module>org.swinglabs.swingx</module>
+ <module>org.biopax.paxtools.biopax-converter</module>
+ <module>org.biopax.paxtools.core</module>
</modules>
</project>
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