See <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/102/changes>
Changes: [mes] Renamed CyRootNetworkFactory to CyRootNetworkManager to better reflect its role. ------------------------------------------ [...truncated 7941 lines...] Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/event-impl-it/3.0.0-alpha8-SNAPSHOT/event-impl-it-3.0.0-alpha8-20111130.002119-228.jar Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/event-impl-it/3.0.0-alpha8-SNAPSHOT/event-impl-it-3.0.0-alpha8-20111130.002119-228.jar (2 KB at 8.5 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/event-impl-it/3.0.0-alpha8-SNAPSHOT/event-impl-it-3.0.0-alpha8-20111130.002119-228.pom Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/event-impl-it/3.0.0-alpha8-SNAPSHOT/event-impl-it-3.0.0-alpha8-20111130.002119-228.pom (3 KB at 15.6 KB/sec) Downloading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/event-impl-it/maven-metadata.xml Downloaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/event-impl-it/maven-metadata.xml (571 B at 8.1 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/event-impl-it/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/event-impl-it/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml (803 B at 5.8 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/event-impl-it/maven-metadata.xml Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/event-impl-it/maven-metadata.xml (571 B at 4.4 KB/sec) [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/event-impl/it/pom.xml> to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 Implementation/modules/org.cytoscape$event-impl-it/builds/2011-11-29_19-03-14/archive/org.cytoscape/event-impl-it/3.0.0-alpha8-SNAPSHOT/event-impl-it-3.0.0-alpha8-SNAPSHOT.pom [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/event-impl/it/target/event-impl-it-3.0.0-alpha8-SNAPSHOT.jar> to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 Implementation/modules/org.cytoscape$event-impl-it/builds/2011-11-29_19-03-14/archive/org.cytoscape/event-impl-it/3.0.0-alpha8-20111130.002119-228/event-impl-it-3.0.0-alpha8-20111130.002119-228.jar [INFO] [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.filter-impl [org.cytoscape.filter] 3.0.0-alpha8-SNAPSHOT [INFO] ------------------------------------------------------------------------ [INFO] [debug] execute contextualize [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 12 resources [INFO] --- maven-resources-plugin:2.5:resources (default-resources) @ filter-impl --- [INFO] [INFO] --- maven-compiler-plugin:2.3.2:compile (default-compile) @ filter-impl --- [INFO] Compiling 61 source files to <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/filter-impl/target/classes> [INFO] [debug] execute contextualize [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] skip non existing resourceDirectory <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/filter-impl/src/test/resources> [INFO] --- maven-resources-plugin:2.5:testResources (default-testResources) @ filter-impl --- [INFO] [INFO] --- maven-compiler-plugin:2.3.2:testCompile (default-testCompile) @ filter-impl --- [INFO] No sources to compile [INFO] [INFO] No tests to run. [INFO] Surefire report directory: <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/filter-impl/target/surefire-reports> ------------------------------------------------------- T E S T S ------------------------------------------------------- [INFO] --- maven-surefire-plugin:2.10:test (default-test) @ filter-impl --- Results : Tests run: 0, Failures: 0, Errors: 0, Skipped: 0 [JENKINS] Recording test results [INFO] [INFO] --- maven-bundle-plugin:2.3.4:bundle (default-bundle) @ filter-impl --- [WARNING] Warning building bundle org.cytoscape:filter-impl:bundle:3.0.0-alpha8-SNAPSHOT : Instructions in Export-Package that are never used: org\.cytoscape\.filter\..*|org\.cytoscape\.filter Classpath: Jar:.,Jar:session-api,Jar:vizmap-api,Jar:presentation-api,Jar:property-api,Jar:viewmodel-api,Jar:model-api,Jar:event-api,Jar:violinstrings,Jar:work-api,Jar:plugin-api,Jar:core-task-api,Jar:io-api,Jar:work-swing-api,Jar:layout-api,Jar:equations-api,Jar:vizmap-gui-api,Jar:webservice-api,Jar:dnd-api,Jar:swing-application-api,Jar:application-api,Jar:swing-util-api,Jar:service-api,Jar:pax-logging-api,Jar:org.osgi.core [WARNING] Warning building bundle org.cytoscape:filter-impl:bundle:3.0.0-alpha8-SNAPSHOT : Superfluous export-package instructions: [org.cytoscape.filter.*] ignoring exception during new ExecutedMojo null [INFO] [INFO] --- maven-source-plugin:2.1.2:jar (attach-sources) @ filter-impl --- [INFO] Building jar: <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/filter-impl/target/filter-impl-3.0.0-alpha8-SNAPSHOT-sources.jar> [INFO] [INFO] Installing <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/filter-impl/target/filter-impl-3.0.0-alpha8-SNAPSHOT.jar> to /opt/tomcat-home/.m2/repository/org/cytoscape/filter-impl/3.0.0-alpha8-SNAPSHOT/filter-impl-3.0.0-alpha8-SNAPSHOT.jar [INFO] Installing <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/filter-impl/pom.xml> to /opt/tomcat-home/.m2/repository/org/cytoscape/filter-impl/3.0.0-alpha8-SNAPSHOT/filter-impl-3.0.0-alpha8-SNAPSHOT.pom [INFO] --- maven-install-plugin:2.3.1:install (default-install) @ filter-impl --- [INFO] Installing <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/filter-impl/target/filter-impl-3.0.0-alpha8-SNAPSHOT-sources.jar> to /opt/tomcat-home/.m2/repository/org/cytoscape/filter-impl/3.0.0-alpha8-SNAPSHOT/filter-impl-3.0.0-alpha8-SNAPSHOT-sources.jar [INFO] [INFO] --- maven-bundle-plugin:2.3.4:install (default-install) @ filter-impl --- [INFO] Installing org/cytoscape/filter-impl/3.0.0-alpha8-SNAPSHOT/filter-impl-3.0.0-alpha8-SNAPSHOT.jar [INFO] Writing OBR metadata [INFO] Downloading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/filter-impl/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml [INFO] --- maven-deploy-plugin:2.7:deploy (default-deploy) @ filter-impl --- Downloaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/filter-impl/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml (1 KB at 9.3 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/filter-impl/3.0.0-alpha8-SNAPSHOT/filter-impl-3.0.0-alpha8-20111130.002132-228.jar Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/filter-impl/3.0.0-alpha8-SNAPSHOT/filter-impl-3.0.0-alpha8-20111130.002132-228.jar (207 KB at 803.3 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/filter-impl/3.0.0-alpha8-SNAPSHOT/filter-impl-3.0.0-alpha8-20111130.002132-228.pom Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/filter-impl/3.0.0-alpha8-SNAPSHOT/filter-impl-3.0.0-alpha8-20111130.002132-228.pom (4 KB at 42.5 KB/sec) Downloading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/filter-impl/maven-metadata.xml Downloaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/filter-impl/maven-metadata.xml (517 B at 4.0 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/filter-impl/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/filter-impl/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml (1 KB at 8.6 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/filter-impl/maven-metadata.xml Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/filter-impl/maven-metadata.xml (517 B at 2.8 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/filter-impl/3.0.0-alpha8-SNAPSHOT/filter-impl-3.0.0-alpha8-20111130.002132-228-sources.jar Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/filter-impl/3.0.0-alpha8-SNAPSHOT/filter-impl-3.0.0-alpha8-20111130.002132-228-sources.jar (163 KB at 703.9 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/filter-impl/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/filter-impl/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml (1 KB at 4.6 KB/sec) [INFO] [INFO] Remote OBR update disabled (enable with -DremoteOBR) [INFO] --- maven-bundle-plugin:2.3.4:deploy (default-deploy) @ filter-impl --- [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/filter-impl/pom.xml> to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 Implementation/modules/org.cytoscape$filter-impl/builds/2011-11-29_19-03-14/archive/org.cytoscape/filter-impl/3.0.0-alpha8-SNAPSHOT/filter-impl-3.0.0-alpha8-SNAPSHOT.pom [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/filter-impl/target/filter-impl-3.0.0-alpha8-SNAPSHOT.jar> to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 Implementation/modules/org.cytoscape$filter-impl/builds/2011-11-29_19-03-14/archive/org.cytoscape/filter-impl/3.0.0-alpha8-20111130.002132-228/filter-impl-3.0.0-alpha8-20111130.002132-228.jar [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/filter-impl/target/filter-impl-3.0.0-alpha8-SNAPSHOT-sources.jar> to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 Implementation/modules/org.cytoscape$filter-impl/builds/2011-11-29_19-03-14/archive/org.cytoscape/filter-impl/3.0.0-alpha8-20111130.002132-228/filter-impl-3.0.0-alpha8-20111130.002132-228-sources.jar [INFO] [INFO] ------------------------------------------------------------------------ [INFO] Building GraphML Reader and Writer for Cytoscape 3 3.0.0-alpha8-SNAPSHOT [INFO] ------------------------------------------------------------------------ [INFO] [debug] execute contextualize [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] --- maven-resources-plugin:2.5:resources (default-resources) @ graphml-impl --- [INFO] Copying 2 resources [INFO] [INFO] --- maven-compiler-plugin:2.3.2:compile (default-compile) @ graphml-impl --- [INFO] Compiling 10 source files to <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/graphml-impl/target/classes> [INFO] ------------------------------------------------------------- [ERROR] COMPILATION ERROR : [INFO] ------------------------------------------------------------- [ERROR] <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/graphml-impl/src/main/java/org/cytoscape/io/internal/CyActivator.java>:[11,37] cannot find symbol symbol : class CyRootNetworkFactory location: package org.cytoscape.model.subnetwork [ERROR] <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/graphml-impl/src/main/java/org/cytoscape/io/internal/read/graphml/GraphMLParser.java>:[24,37] cannot find symbol symbol : class CyRootNetworkFactory location: package org.cytoscape.model.subnetwork [ERROR] <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/graphml-impl/src/main/java/org/cytoscape/io/internal/read/graphml/GraphMLParser.java>:[54,15] cannot find symbol symbol : class CyRootNetworkFactory location: class org.cytoscape.io.internal.read.graphml.GraphMLParser [ERROR] <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/graphml-impl/src/main/java/org/cytoscape/io/internal/read/graphml/GraphMLParser.java>:[75,9] cannot find symbol symbol : class CyRootNetworkFactory location: class org.cytoscape.io.internal.read.graphml.GraphMLParser [ERROR] <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/graphml-impl/src/main/java/org/cytoscape/io/internal/read/graphml/GraphMLReader.java>:[16,37] cannot find symbol symbol : class CyRootNetworkFactory location: package org.cytoscape.model.subnetwork [ERROR] <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/graphml-impl/src/main/java/org/cytoscape/io/internal/read/graphml/GraphMLReader.java>:[49,15] cannot find symbol symbol : class CyRootNetworkFactory location: class org.cytoscape.io.internal.read.graphml.GraphMLReader [ERROR] <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/graphml-impl/src/main/java/org/cytoscape/io/internal/read/graphml/GraphMLReader.java>:[52,99] cannot find symbol symbol : class CyRootNetworkFactory location: class org.cytoscape.io.internal.read.graphml.GraphMLReader [ERROR] <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/graphml-impl/src/main/java/org/cytoscape/io/internal/read/graphml/GraphMLReaderFactory.java>:[8,37] cannot find symbol symbol : class CyRootNetworkFactory location: package org.cytoscape.model.subnetwork [ERROR] <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/graphml-impl/src/main/java/org/cytoscape/io/internal/read/graphml/GraphMLReaderFactory.java>:[19,15] cannot find symbol symbol : class CyRootNetworkFactory location: class org.cytoscape.io.internal.read.graphml.GraphMLReaderFactory [ERROR] <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/graphml-impl/src/main/java/org/cytoscape/io/internal/read/graphml/GraphMLReaderFactory.java>:[28,9] cannot find symbol symbol : class CyRootNetworkFactory location: class org.cytoscape.io.internal.read.graphml.GraphMLReaderFactory [ERROR] <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/graphml-impl/src/main/java/org/cytoscape/io/internal/CyActivator.java>:[32,2] cannot find symbol symbol : class CyRootNetworkFactory location: class org.cytoscape.io.internal.CyActivator [ERROR] <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/graphml-impl/src/main/java/org/cytoscape/io/internal/CyActivator.java>:[32,71] cannot find symbol symbol : class CyRootNetworkFactory location: class org.cytoscape.io.internal.CyActivator [INFO] 12 errors [INFO] ------------------------------------------------------------- [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/graphml-impl/pom.xml> to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 Implementation/modules/org.cytoscape$graphml-impl/builds/2011-11-29_19-03-14/archive/org.cytoscape/graphml-impl/3.0.0-alpha8-SNAPSHOT/graphml-impl-3.0.0-alpha8-SNAPSHOT.pom [INFO] ------------------------------------------------------------------------ [INFO] Reactor Summary: [INFO] [INFO] Cytoscape Implementation Parent Project POM ....... SUCCESS [8.146s] [INFO] org.cytoscape.biopax-impl [org.cytoscape.biopax] .. SUCCESS [16.390s] [INFO] Command Executor .................................. SUCCESS [6.528s] [INFO] org.cytoscape.equations-impl ...................... SUCCESS [17.012s] [INFO] model-impl-parent ................................. SUCCESS [0.847s] [INFO] org.cytoscape.model-impl .......................... SUCCESS [35.901s] [INFO] viewmodel-impl-parent ............................. SUCCESS [1.247s] [INFO] org.cytoscape.viewmodel-impl ...................... SUCCESS [8.532s] [INFO] Ding Implementation Parent Pom .................... SUCCESS [0.880s] [INFO] org.cytoscape.util-intr ........................... SUCCESS [9.052s] [INFO] org.cytoscape.spacial ............................. SUCCESS [10.074s] [INFO] org.cytoscape.graph-render ........................ SUCCESS [10:38.617s] [INFO] org.cytoscape.ding-presentation-impl .............. SUCCESS [43.585s] [INFO] org.cytoscape.core-task-impl ...................... SUCCESS [1:04.777s] [INFO] org.cytoscape.cpath2-impl [org.cytoscape.cpath2] .. SUCCESS [27.058s] [INFO] org.cytoscape.ding-customgraphics-manager-impl .... SUCCESS [11.614s] [INFO] io-impl-parent .................................... SUCCESS [0.914s] [INFO] org.cytoscape.io-impl [org.cytoscape.io] .......... SUCCESS [41.879s] [INFO] event-impl-parent ................................. SUCCESS [1.064s] [INFO] org.cytoscape.event-impl .......................... SUCCESS [19.922s] [INFO] org.cytoscape.layout-impl ......................... SUCCESS [9.161s] [INFO] org.cytoscape.ding-impl-performance-debug ......... SUCCESS [48.649s] [INFO] org.cytoscape.editor-impl ......................... SUCCESS [9.634s] [INFO] org.cytoscape.equations-functions-impl ............ SUCCESS [8.167s] [INFO] org.cytoscape.event-impl-it ....................... SUCCESS [14.782s] [INFO] org.cytoscape.filter-impl [org.cytoscape.filter] .. SUCCESS [13.696s] [INFO] GraphML Reader and Writer for Cytoscape 3 ......... FAILURE [2.351s] [INFO] org.cytoscape.io-impl-performance ................. SKIPPED [INFO] org.cytoscape.layout-cytoscape-impl [csplugins.layout] SKIPPED [INFO] org.cytoscape.layout-jgraph-impl [csplugins.layout] SKIPPED [INFO] org.cytoscape.layout-prefuse-impl [org.cytoscape.prefuse.layouts.internal] SKIPPED [INFO] org.cytoscape.linkout-impl [org.cytoscape.linkout.internal] SKIPPED [INFO] org.cytoscape.log-swing-impl [org.cytoscape.log] .. SKIPPED [INFO] Manual Layout ..................................... SKIPPED [INFO] NetworkAnalyzer ................................... SKIPPED [INFO] Advanced Network Merge ............................ SKIPPED [INFO] org.cytoscape.plugin-impl ......................... SKIPPED [INFO] org.cytoscape.presentation-impl [org.cytoscape.view.presentation] SKIPPED [INFO] org.cytoscape.property.internal ................... SKIPPED [INFO] org.cytoscape.psi-mi-impl [org.cytoscape.psi_mi] .. SKIPPED [INFO] org.cytoscape.sbml-impl [org.cytoscape.sbml] ...... SKIPPED [INFO] org.cytoscape.search-impl [org.cytoscape.search] .. SKIPPED [INFO] org.cytoscape.session-impl ........................ SKIPPED [INFO] Cytoscape Swing Application Impl .................. SKIPPED [INFO] Cytoscape Table Browser Implementation ............ SKIPPED [INFO] org.cytoscape.table-import-impl [org.cytoscape.tableimport] SKIPPED [INFO] org.cytoscape.vizmap-gui-impl ..................... SKIPPED [INFO] vizmap-impl-parent ................................ SKIPPED [INFO] org.cytoscape.view.vizmap-impl .................... SKIPPED [INFO] org.cytoscape.io.webservice-biomart-client-impl [org.cytoscape.io.webservice.biomart] SKIPPED [INFO] org.cytoscape.webservice-impl [org.cytoscape.webservice.internal] SKIPPED [INFO] org.cytoscape.webservice-ncbi-client-impl [org.cytoscape.webservice.ncbi] SKIPPED [INFO] work-swing-impl-parent ............................ SKIPPED [INFO] org.cytoscape.work-swing-impl ..................... SKIPPED [INFO] org.cytoscape.application-impl .................... SKIPPED [INFO] ------------------------------------------------------------------------ [INFO] BUILD FAILURE [INFO] ------------------------------------------------------------------------ [INFO] Total time: 18:12.871s [INFO] Finished at: Tue Nov 29 19:21:37 GMT-05:00 2011 [INFO] Final Memory: 51M/122M [INFO] ------------------------------------------------------------------------ mavenExecutionResult exceptions not empty message : Failed to execute goal org.apache.maven.plugins:maven-compiler-plugin:2.3.2:compile (default-compile) on project graphml-impl: Compilation failure cause : Compilation failure Stack trace : org.apache.maven.lifecycle.LifecycleExecutionException: Failed to execute goal org.apache.maven.plugins:maven-compiler-plugin:2.3.2:compile (default-compile) on project graphml-impl: Compilation failure at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:213) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:153) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:145) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:84) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:59) at org.apache.maven.lifecycle.internal.LifecycleStarter.singleThreadedBuild(LifecycleStarter.java:183) at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:161) at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:319) at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:156) at org.jvnet.hudson.maven3.launcher.Maven3Launcher.main(Maven3Launcher.java:79) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:616) at org.codehaus.plexus.classworlds.launcher.Launcher.launchStandard(Launcher.java:329) at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:239) at org.jvnet.hudson.maven3.agent.Maven3Main.launch(Maven3Main.java:158) at hudson.maven.Maven3Builder.call(Maven3Builder.java:112) at hudson.maven.Maven3Builder.call(Maven3Builder.java:70) at hudson.remoting.UserRequest.perform(UserRequest.java:118) at hudson.remoting.UserRequest.perform(UserRequest.java:48) at hudson.remoting.Request$2.run(Request.java:287) at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471) at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:334) at java.util.concurrent.FutureTask.run(FutureTask.java:166) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1110) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603) at java.lang.Thread.run(Thread.java:636) Caused by: org.apache.maven.plugin.CompilationFailureException: Compilation failure at org.apache.maven.plugin.AbstractCompilerMojo.execute(AbstractCompilerMojo.java:656) at org.apache.maven.plugin.CompilerMojo.execute(CompilerMojo.java:128) at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:101) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:209) ... 27 more Sending e-mails to: [email protected] channel stopped -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. 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