Author: kono
Date: 2011-12-06 16:56:01 -0800 (Tue, 06 Dec 2011)
New Revision: 27723
Modified:
core3/impl/trunk/property-impl/src/main/resources/bookmarks.xml
Log:
Old datasets had been removed and BioGRID files are added.
Modified: core3/impl/trunk/property-impl/src/main/resources/bookmarks.xml
===================================================================
--- core3/impl/trunk/property-impl/src/main/resources/bookmarks.xml
2011-12-07 00:02:46 UTC (rev 27722)
+++ core3/impl/trunk/property-impl/src/main/resources/bookmarks.xml
2011-12-07 00:56:01 UTC (rev 27723)
@@ -337,24 +337,21 @@
</category>
</category>
<category name="network">
+ <dataSource name="Human Interactome: BioGRID Release 3.1.83
(11/25/2011)"
+
xlink:href="http://www.cytoscape.org/datasets/BIOGRID-ORGANISM-Homo_sapiens-3.1.83.mitab";
+ format="mitab" />
+ <dataSource name="Yeast Interactome: BioGRID Release 3.1.83
(11/25/2011)"
+
xlink:href="http://www.cytoscape.org/datasets/BIOGRID-ORGANISM-Saccharomyces_cerevisiae-3.1.83.mitab";
+ format="mitab" />
+ <dataSource name="Mouse Interactome: BioGRID Release 3.1.83
(11/25/2011)"
+
xlink:href="http://www.cytoscape.org/datasets/BIOGRID-ORGANISM-Mus_musculus-3.1.83.mitab";
+ format="mitab" />
+ <dataSource name="Fly Interactome: BioGRID Release 3.1.83
(11/25/2011)"
+
xlink:href="http://www.cytoscape.org/datasets/BIOGRID-ORGANISM-Drosophila_melanogaster-3.1.83.mitab";
+ format="mitab" />
<dataSource name="Yeast Protein-Protein: Ideker, T. et al.
(galFiltered.sif)"
-
xlink:href="http://chianti.ucsd.edu/kono/data/galFiltered.sif";
+
xlink:href="http://www.cytoscape.org/datasets/galFiltered.sif";
format="sif" />
- <dataSource name="Human Protein-Protein: HPRD Literature
Curated Interactions"
- xlink:href="http://cytoscape.org/datasets/HPRD.sif";
- format="sif" />
- <dataSource name="Human Protein-Protein: Rual et al. Toward a
proteome-scale map of the human protein-protein interaction network. Nature
2005."
- xlink:href="http://cytoscape.org/datasets/rual.sif";
- format="sif" />
- <dataSource name="Human Protein-Protein: Rual et al.
(Subnetwork for tutorial)"
-
xlink:href="http://www.cytoscape.org/tut/getting.started/RUAL.subset.sif";
- format="sif" />
- <dataSource name="Human Protein-Protein: Stelzl et al. A human
protein-protein interaction network: a resource for annotating the proteome.
Cell 2005."
- xlink:href="http://cytoscape.org/datasets/stelzl.sif";
- format="sif" />
- <dataSource name="Yeast Protein-Protein: Ptacek et al. Global
analysis of protein phosphorylation in yeast. Nature 2005"
- xlink:href="http://cytoscape.org/datasets/ptacek.sif";
- format="sif" />
</category>
<category name="table">
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