Author: pwang
Date: 2012-02-27 17:09:46 -0800 (Mon, 27 Feb 2012)
New Revision: 28381
Modified:
core3/support/trunk/samples/sample15/src/main/java/org/cytoscape/sample/internal/CyActivator.java
core3/support/trunk/samples/sample15/src/main/java/org/cytoscape/sample/internal/Sample15.java
Log:
Updated
Modified:
core3/support/trunk/samples/sample15/src/main/java/org/cytoscape/sample/internal/CyActivator.java
===================================================================
---
core3/support/trunk/samples/sample15/src/main/java/org/cytoscape/sample/internal/CyActivator.java
2012-02-28 00:00:32 UTC (rev 28380)
+++
core3/support/trunk/samples/sample15/src/main/java/org/cytoscape/sample/internal/CyActivator.java
2012-02-28 01:09:46 UTC (rev 28381)
@@ -1,5 +1,6 @@
package org.cytoscape.sample.internal;
+import org.cytoscape.application.CyApplicationManager;
import org.cytoscape.application.swing.CyAction;
import org.osgi.framework.BundleContext;
import org.cytoscape.service.util.AbstractCyActivator;
@@ -14,17 +15,21 @@
super();
}
-
public void start(BundleContext bc) {
+ CyApplicationManager cyApplicationManagerServiceRef =
getService(bc,CyApplicationManager.class);
+
+ VisualMappingManager vmmServiceRef =
getService(bc,VisualMappingManager.class);
+
VisualStyleFactory visualStyleFactoryServiceRef =
getService(bc,VisualStyleFactory.class);
- VisualMappingFunctionFactory continuousMappingFactoryServiceRef
= getService(bc,VisualMappingFunctionFactory.class,"(mapping.type=continuous)");
+ VisualMappingFunctionFactory vmfFactoryC =
getService(bc,VisualMappingFunctionFactory.class, "(mapping.type=continuous)");
+ VisualMappingFunctionFactory vmfFactoryD =
getService(bc,VisualMappingFunctionFactory.class, "(mapping.type=discrete)");
+ VisualMappingFunctionFactory vmfFactoryP =
getService(bc,VisualMappingFunctionFactory.class, "(mapping.type=passthrough)");
- VisualMappingManager vmmServiceRef =
getService(bc,VisualMappingManager.class);
+ Sample15 sample16Action = new
Sample15(cyApplicationManagerServiceRef, vmmServiceRef,
visualStyleFactoryServiceRef,
+ vmfFactoryC, vmfFactoryD, vmfFactoryP);
- Sample15 sample16Action = new
Sample15(visualStyleFactoryServiceRef, continuousMappingFactoryServiceRef,
vmmServiceRef);
-
registerService(bc,sample16Action,CyAction.class, new
Properties());
}
}
Modified:
core3/support/trunk/samples/sample15/src/main/java/org/cytoscape/sample/internal/Sample15.java
===================================================================
---
core3/support/trunk/samples/sample15/src/main/java/org/cytoscape/sample/internal/Sample15.java
2012-02-28 00:00:32 UTC (rev 28380)
+++
core3/support/trunk/samples/sample15/src/main/java/org/cytoscape/sample/internal/Sample15.java
2012-02-28 01:09:46 UTC (rev 28381)
@@ -1,29 +1,43 @@
package org.cytoscape.sample.internal;
import java.awt.event.ActionEvent;
+import org.cytoscape.application.CyApplicationManager;
import org.cytoscape.application.swing.AbstractCyAction;
+import org.cytoscape.model.CyTable;
import org.cytoscape.view.presentation.property.BasicVisualLexicon;
+import org.cytoscape.view.presentation.property.NodeShapeVisualProperty;
import org.cytoscape.view.vizmap.VisualMappingManager;
import org.cytoscape.view.vizmap.VisualStyleFactory;
import org.cytoscape.view.vizmap.VisualStyle;
import org.cytoscape.view.vizmap.VisualMappingFunction;
import org.cytoscape.view.vizmap.VisualMappingFunctionFactory;
+import org.cytoscape.view.vizmap.mappings.DiscreteMapping;
+import org.cytoscape.view.vizmap.mappings.PassthroughMapping;
+import java.util.Iterator;
+
public class Sample15 extends AbstractCyAction {
-
+
+ private CyApplicationManager cyApplicationManagerServiceRef;
private VisualStyleFactory visualStyleFactoryServiceRef;
- private VisualMappingFunctionFactory continuousMappingFactoryServiceRef;
private VisualMappingManager vmmServiceRef;
- public Sample15(VisualStyleFactory visualStyleFactoryServiceRef,
VisualMappingFunctionFactory continuousMappingFactoryServiceRef,
- VisualMappingManager vmmServiceRef){
+ private VisualMappingFunctionFactory vmfFactoryC;
+ private VisualMappingFunctionFactory vmfFactoryD;
+ private VisualMappingFunctionFactory vmfFactoryP;
+
+ public Sample15(CyApplicationManager cyApplicationManagerServiceRef,
VisualMappingManager vmmServiceRef, VisualStyleFactory
visualStyleFactoryServiceRef,
+ VisualMappingFunctionFactory
vmfFactoryC,VisualMappingFunctionFactory
vmfFactoryD,VisualMappingFunctionFactory vmfFactoryP){
// Add a menu item -- Apps->sample15
super("sample15");
setPreferredMenu("Apps");
+ this.cyApplicationManagerServiceRef =
cyApplicationManagerServiceRef;
this.visualStyleFactoryServiceRef =
visualStyleFactoryServiceRef;
- this.continuousMappingFactoryServiceRef =
continuousMappingFactoryServiceRef;
- this.vmmServiceRef = vmmServiceRef;
+ this.vmmServiceRef = vmmServiceRef;
+ this.vmfFactoryC = vmfFactoryC;
+ this.vmfFactoryD = vmfFactoryD;
+ this.vmfFactoryP = vmfFactoryP;
}
/**
@@ -33,17 +47,44 @@
*/
public void actionPerformed(ActionEvent e) {
+ // If the style already existed, remove it first
+ Iterator it = vmmServiceRef.getAllVisualStyles().iterator();
+ while (it.hasNext()){
+ VisualStyle curVS = (VisualStyle)it.next();
+ if (curVS.getTitle().equalsIgnoreCase("sample15 visual
style"))
+ {
+ vmmServiceRef.removeVisualStyle(curVS);
+ break;
+ }
+ }
+
+ // Create a new Visual style
VisualStyle vs=
this.visualStyleFactoryServiceRef.createVisualStyle("sample15 visual style");
this.vmmServiceRef.addVisualStyle(vs);
- System.out.println("New visual style is created!");
+ CyTable attrForTest =
cyApplicationManagerServiceRef.getCurrentNetwork().getDefaultNodeTable();
- VisualMappingFunction mapping =
-
this.continuousMappingFactoryServiceRef.createVisualMappingFunction("degree",
Integer.class, null, BasicVisualLexicon.NODE_FILL_COLOR);
+ // 1. pass-through mapping
+ String ctrAttrName1 = "SUID";
+ PassthroughMapping pMapping = (PassthroughMapping)
this.vmfFactoryP.createVisualMappingFunction(ctrAttrName1, String.class,
attrForTest, BasicVisualLexicon.NODE_LABEL);
+
+ // 2. DiscreteMapping - Set node shape based on attribute value
+ String ctrAttrName2 = "NodeShape";
+ Class dataType = String.class;
+ DiscreteMapping dMapping = (DiscreteMapping)
this.vmfFactoryD.createVisualMappingFunction(ctrAttrName2, dataType,
attrForTest, BasicVisualLexicon.NODE_SHAPE);
+
+ // If attribute value is "diamon", map the nodeShape to DIAMOND
+ String key = "diamond";
+ dMapping.putMapValue(key, NodeShapeVisualProperty.DIAMOND);
+
+ // If attribute value is "triangle", map the nodeShape to
TRIANGLE
+ key = "triangle";
+ dMapping.putMapValue(key, NodeShapeVisualProperty.TRIANGLE);
+
+ //3. continous mapping. Please look at Sample16
- //mapping.
-
- vs.addVisualMappingFunction(mapping);
+ vs.addVisualMappingFunction(pMapping);
+ vs.addVisualMappingFunction(dMapping);
}
}
--
You received this message because you are subscribed to the Google Groups
"cytoscape-cvs" group.
To post to this group, send email to [email protected].
To unsubscribe from this group, send email to
[email protected].
For more options, visit this group at
http://groups.google.com/group/cytoscape-cvs?hl=en.
