See <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/625/changes>
Changes: [jm] Removed TaskManager.execute(iterator, tunableContext) ------------------------------------------ [...truncated 17899 lines...] [INFO] Remote OBR update disabled (enable with -DremoteOBR) [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/webservice-impl/pom.xml> to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 Implementation/modules/org.cytoscape$webservice-impl/builds/2012-03-23_14-39-05/archive/org.cytoscape/webservice-impl/3.0.0-alpha8-SNAPSHOT/webservice-impl-3.0.0-alpha8-SNAPSHOT.pom [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/webservice-impl/target/webservice-impl-3.0.0-alpha8-SNAPSHOT.jar> to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 Implementation/modules/org.cytoscape$webservice-impl/builds/2012-03-23_14-39-05/archive/org.cytoscape/webservice-impl/3.0.0-alpha8-20120323.195118-691/webservice-impl-3.0.0-alpha8-20120323.195118-691.jar [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/webservice-impl/target/webservice-impl-3.0.0-alpha8-SNAPSHOT-sources.jar> to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 Implementation/modules/org.cytoscape$webservice-impl/builds/2012-03-23_14-39-05/archive/org.cytoscape/webservice-impl/3.0.0-alpha8-20120323.195118-691/webservice-impl-3.0.0-alpha8-20120323.195118-691-sources.jar [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/webservice-impl/target/webservice-impl-3.0.0-alpha8-SNAPSHOT-tests.jar> to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 Implementation/modules/org.cytoscape$webservice-impl/builds/2012-03-23_14-39-05/archive/org.cytoscape/webservice-impl/3.0.0-alpha8-20120323.195118-691/webservice-impl-3.0.0-alpha8-20120323.195118-691-tests.jar [INFO] [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.webservice-ncbi-client-impl [org.cytoscape.webservice.ncbi] 3.0.0-alpha8-SNAPSHOT [INFO] ------------------------------------------------------------------------ [INFO] [debug] execute contextualize [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 4 resources [INFO] --- maven-resources-plugin:2.5:resources (default-resources) @ webservice-ncbi-client-impl --- [INFO] [INFO] --- maven-compiler-plugin:2.3.2:compile (default-compile) @ webservice-ncbi-client-impl --- [INFO] Compiling 16 source files to <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/webservice-ncbi-client-impl/target/classes> [INFO] [debug] execute contextualize [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] skip non existing resourceDirectory <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/webservice-ncbi-client-impl/src/test/resources> [INFO] --- maven-resources-plugin:2.5:testResources (default-testResources) @ webservice-ncbi-client-impl --- [INFO] [INFO] Compiling 1 source file to <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/webservice-ncbi-client-impl/target/test-classes> [INFO] --- maven-compiler-plugin:2.3.2:testCompile (default-testCompile) @ webservice-ncbi-client-impl --- [INFO] [INFO] Surefire report directory: <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/webservice-ncbi-client-impl/target/surefire-reports> [INFO] --- maven-surefire-plugin:2.7.1:test (default-test) @ webservice-ncbi-client-impl --- ------------------------------------------------------- T E S T S ------------------------------------------------------- Running org.cytoscape.webservice.ncbi.EntrezRestClientTest Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.244 sec Results : Tests run: 2, Failures: 0, Errors: 0, Skipped: 0 [JENKINS] Recording test results [INFO] [INFO] --- maven-bundle-plugin:2.3.4:bundle (default-bundle) @ webservice-ncbi-client-impl --- ignoring exception during new ExecutedMojo null [INFO] [INFO] --- maven-source-plugin:2.1.2:jar (attach-sources) @ webservice-ncbi-client-impl --- [INFO] Building jar: <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/webservice-ncbi-client-impl/target/webservice-ncbi-client-impl-3.0.0-alpha8-SNAPSHOT-sources.jar> [INFO] [INFO] --- maven-jar-plugin:2.3.1:test-jar (default) @ webservice-ncbi-client-impl --- [INFO] Building jar: <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/webservice-ncbi-client-impl/target/webservice-ncbi-client-impl-3.0.0-alpha8-SNAPSHOT-tests.jar> [INFO] Installing <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/webservice-ncbi-client-impl/target/webservice-ncbi-client-impl-3.0.0-alpha8-SNAPSHOT.jar> to /opt/tomcat-home/.m2/repository/org/cytoscape/webservice-ncbi-client-impl/3.0.0-alpha8-SNAPSHOT/webservice-ncbi-client-impl-3.0.0-alpha8-SNAPSHOT.jar [INFO] [INFO] --- maven-install-plugin:2.3.1:install (default-install) @ webservice-ncbi-client-impl --- [INFO] Installing <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/webservice-ncbi-client-impl/pom.xml> to /opt/tomcat-home/.m2/repository/org/cytoscape/webservice-ncbi-client-impl/3.0.0-alpha8-SNAPSHOT/webservice-ncbi-client-impl-3.0.0-alpha8-SNAPSHOT.pom [INFO] Installing <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/webservice-ncbi-client-impl/target/webservice-ncbi-client-impl-3.0.0-alpha8-SNAPSHOT-sources.jar> to /opt/tomcat-home/.m2/repository/org/cytoscape/webservice-ncbi-client-impl/3.0.0-alpha8-SNAPSHOT/webservice-ncbi-client-impl-3.0.0-alpha8-SNAPSHOT-sources.jar [INFO] Installing <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/webservice-ncbi-client-impl/target/webservice-ncbi-client-impl-3.0.0-alpha8-SNAPSHOT-tests.jar> to /opt/tomcat-home/.m2/repository/org/cytoscape/webservice-ncbi-client-impl/3.0.0-alpha8-SNAPSHOT/webservice-ncbi-client-impl-3.0.0-alpha8-SNAPSHOT-tests.jar [INFO] [INFO] --- maven-bundle-plugin:2.3.4:install (default-install) @ webservice-ncbi-client-impl --- [INFO] Installing org/cytoscape/webservice-ncbi-client-impl/3.0.0-alpha8-SNAPSHOT/webservice-ncbi-client-impl-3.0.0-alpha8-SNAPSHOT.jar [INFO] Writing OBR metadata [INFO] [INFO] --- maven-deploy-plugin:2.7:deploy (default-deploy) @ webservice-ncbi-client-impl --- Downloading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/webservice-ncbi-client-impl/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml Downloaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/webservice-ncbi-client-impl/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml (2 KB at 11.6 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/webservice-ncbi-client-impl/3.0.0-alpha8-SNAPSHOT/webservice-ncbi-client-impl-3.0.0-alpha8-20120323.195126-691.jar Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/webservice-ncbi-client-impl/3.0.0-alpha8-SNAPSHOT/webservice-ncbi-client-impl-3.0.0-alpha8-20120323.195126-691.jar (54 KB at 1101.8 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/webservice-ncbi-client-impl/3.0.0-alpha8-SNAPSHOT/webservice-ncbi-client-impl-3.0.0-alpha8-20120323.195126-691.pom Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/webservice-ncbi-client-impl/3.0.0-alpha8-SNAPSHOT/webservice-ncbi-client-impl-3.0.0-alpha8-20120323.195126-691.pom (5 KB at 58.0 KB/sec) Downloading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/webservice-ncbi-client-impl/maven-metadata.xml Downloaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/webservice-ncbi-client-impl/maven-metadata.xml (508 B at 29.2 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/webservice-ncbi-client-impl/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/webservice-ncbi-client-impl/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml (2 KB at 34.2 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/webservice-ncbi-client-impl/maven-metadata.xml Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/webservice-ncbi-client-impl/maven-metadata.xml (508 B at 15.5 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/webservice-ncbi-client-impl/3.0.0-alpha8-SNAPSHOT/webservice-ncbi-client-impl-3.0.0-alpha8-20120323.195126-691-sources.jar Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/webservice-ncbi-client-impl/3.0.0-alpha8-SNAPSHOT/webservice-ncbi-client-impl-3.0.0-alpha8-20120323.195126-691-sources.jar (30 KB at 540.7 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/webservice-ncbi-client-impl/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/webservice-ncbi-client-impl/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml (2 KB at 44.0 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/webservice-ncbi-client-impl/3.0.0-alpha8-SNAPSHOT/webservice-ncbi-client-impl-3.0.0-alpha8-20120323.195126-691-tests.jar Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/webservice-ncbi-client-impl/3.0.0-alpha8-SNAPSHOT/webservice-ncbi-client-impl-3.0.0-alpha8-20120323.195126-691-tests.jar (4 KB at 55.8 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/webservice-ncbi-client-impl/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/webservice-ncbi-client-impl/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml (2 KB at 17.6 KB/sec) [INFO] [INFO] Remote OBR update disabled (enable with -DremoteOBR) [INFO] --- maven-bundle-plugin:2.3.4:deploy (default-deploy) @ webservice-ncbi-client-impl --- [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/webservice-ncbi-client-impl/pom.xml> to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 Implementation/modules/org.cytoscape$webservice-ncbi-client-impl/builds/2012-03-23_14-39-05/archive/org.cytoscape/webservice-ncbi-client-impl/3.0.0-alpha8-SNAPSHOT/webservice-ncbi-client-impl-3.0.0-alpha8-SNAPSHOT.pom [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/webservice-ncbi-client-impl/target/webservice-ncbi-client-impl-3.0.0-alpha8-SNAPSHOT.jar> to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 Implementation/modules/org.cytoscape$webservice-ncbi-client-impl/builds/2012-03-23_14-39-05/archive/org.cytoscape/webservice-ncbi-client-impl/3.0.0-alpha8-20120323.195126-691/webservice-ncbi-client-impl-3.0.0-alpha8-20120323.195126-691.jar [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/webservice-ncbi-client-impl/target/webservice-ncbi-client-impl-3.0.0-alpha8-SNAPSHOT-sources.jar> to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 Implementation/modules/org.cytoscape$webservice-ncbi-client-impl/builds/2012-03-23_14-39-05/archive/org.cytoscape/webservice-ncbi-client-impl/3.0.0-alpha8-20120323.195126-691/webservice-ncbi-client-impl-3.0.0-alpha8-20120323.195126-691-sources.jar [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/webservice-ncbi-client-impl/target/webservice-ncbi-client-impl-3.0.0-alpha8-SNAPSHOT-tests.jar> to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 Implementation/modules/org.cytoscape$webservice-ncbi-client-impl/builds/2012-03-23_14-39-05/archive/org.cytoscape/webservice-ncbi-client-impl/3.0.0-alpha8-20120323.195126-691/webservice-ncbi-client-impl-3.0.0-alpha8-20120323.195126-691-tests.jar [INFO] [INFO] ------------------------------------------------------------------------ [INFO] Building work-swing-impl-parent 3.0.0-alpha8-SNAPSHOT [INFO] ------------------------------------------------------------------------ ignoring exception during new ExecutedMojo null [INFO] [INFO] --- maven-source-plugin:2.1.2:jar (attach-sources) @ work-swing-impl-parent --- [INFO] [INFO] --- maven-install-plugin:2.3.1:install (default-install) @ work-swing-impl-parent --- [INFO] Installing <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/work-swing-impl/pom.xml> to /opt/tomcat-home/.m2/repository/org/cytoscape/work-swing-impl-parent/3.0.0-alpha8-SNAPSHOT/work-swing-impl-parent-3.0.0-alpha8-SNAPSHOT.pom [INFO] [INFO] --- maven-deploy-plugin:2.5:deploy (default-deploy) @ work-swing-impl-parent --- Downloading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/work-swing-impl-parent/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml Downloaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/work-swing-impl-parent/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml (630 B at 14.3 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/work-swing-impl-parent/3.0.0-alpha8-SNAPSHOT/work-swing-impl-parent-3.0.0-alpha8-20120323.195127-691.pom Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/work-swing-impl-parent/3.0.0-alpha8-SNAPSHOT/work-swing-impl-parent-3.0.0-alpha8-20120323.195127-691.pom (4 KB at 63.5 KB/sec) Downloading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/work-swing-impl-parent/maven-metadata.xml Downloaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/work-swing-impl-parent/maven-metadata.xml (501 B at 14.8 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/work-swing-impl-parent/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/work-swing-impl-parent/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml (630 B at 15.0 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/work-swing-impl-parent/maven-metadata.xml Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/work-swing-impl-parent/maven-metadata.xml (501 B at 11.4 KB/sec) [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/work-swing-impl/pom.xml> to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 Implementation/modules/org.cytoscape$work-swing-impl-parent/builds/2012-03-23_14-39-05/archive/org.cytoscape/work-swing-impl-parent/3.0.0-alpha8-SNAPSHOT/work-swing-impl-parent-3.0.0-alpha8-SNAPSHOT.pom [INFO] [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.work-swing-impl 3.0.0-alpha8-SNAPSHOT [INFO] ------------------------------------------------------------------------ [INFO] [debug] execute contextualize [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 3 resources [INFO] --- maven-resources-plugin:2.5:resources (default-resources) @ work-swing-impl --- [INFO] [INFO] --- maven-compiler-plugin:2.3.2:compile (default-compile) @ work-swing-impl --- [INFO] Compiling 47 source files to <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/work-swing-impl/impl/target/classes> [INFO] ------------------------------------------------------------- [ERROR] COMPILATION ERROR : [INFO] ------------------------------------------------------------- [ERROR] <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/work-swing-impl/impl/src/main/java/org/cytoscape/work/internal/sync/SyncTaskManager.java>:[21,7] org.cytoscape.work.internal.sync.SyncTaskManager is not abstract and does not override abstract method execute(org.cytoscape.work.TaskIterator,java.lang.Object) in org.cytoscape.work.TaskManager [ERROR] <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/work-swing-impl/impl/src/main/java/org/cytoscape/work/internal/submenu/SubmenuTaskManagerImpl.java>:[11,7] org.cytoscape.work.internal.submenu.SubmenuTaskManagerImpl is not abstract and does not override abstract method execute(org.cytoscape.work.TaskIterator,java.lang.Object) in org.cytoscape.work.TaskManager [ERROR] <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/work-swing-impl/impl/src/main/java/org/cytoscape/work/internal/task/JPanelTaskManager.java>:[19,7] org.cytoscape.work.internal.task.JPanelTaskManager is not abstract and does not override abstract method execute(org.cytoscape.work.TaskIterator,java.lang.Object) in org.cytoscape.work.TaskManager [INFO] 3 errors [INFO] ------------------------------------------------------------- [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/work-swing-impl/impl/pom.xml> to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 Implementation/modules/org.cytoscape$work-swing-impl/builds/2012-03-23_14-39-05/archive/org.cytoscape/work-swing-impl/3.0.0-alpha8-SNAPSHOT/work-swing-impl-3.0.0-alpha8-SNAPSHOT.pom [INFO] ------------------------------------------------------------------------ [INFO] Reactor Summary: [INFO] [INFO] Cytoscape Implementation Parent Project POM ....... SUCCESS [5.153s] [INFO] org.cytoscape.biopax-impl [org.cytoscape.biopax] .. SUCCESS [8.311s] [INFO] Command Executor .................................. SUCCESS [2.913s] [INFO] org.cytoscape.equations-impl ...................... SUCCESS [6.842s] [INFO] model-impl-parent ................................. SUCCESS [0.463s] [INFO] org.cytoscape.model-impl .......................... SUCCESS [8.342s] [INFO] viewmodel-impl-parent ............................. SUCCESS [0.429s] [INFO] org.cytoscape.viewmodel-impl ...................... SUCCESS [3.204s] [INFO] Ding Implementation Parent Pom .................... SUCCESS [1.168s] [INFO] org.cytoscape.util-intr ........................... SUCCESS [3.399s] [INFO] org.cytoscape.spacial ............................. SUCCESS [3.969s] [INFO] org.cytoscape.graph-render ........................ SUCCESS [4:22.656s] [INFO] org.cytoscape.ding-presentation-impl .............. SUCCESS [11.912s] [INFO] org.cytoscape.core-task-impl ...................... SUCCESS [21.500s] [INFO] org.cytoscape.cpath2-impl [org.cytoscape.cpath2] .. SUCCESS [12.377s] [INFO] org.cytoscape.ding-customgraphics-manager-impl .... SUCCESS [4.211s] [INFO] org.cytoscape.group-impl [org.cytoscape.group.internal] SUCCESS [4.747s] [INFO] io-impl-parent .................................... SUCCESS [0.468s] [INFO] org.cytoscape.io-impl [org.cytoscape.io.internal] . SUCCESS [18.431s] [INFO] event-impl-parent ................................. SUCCESS [0.413s] [INFO] org.cytoscape.event-impl .......................... SUCCESS [10.848s] [INFO] org.cytoscape.layout-impl ......................... SUCCESS [3.173s] [INFO] org.cytoscape.ding-impl-performance-debug ......... SUCCESS [20.015s] [INFO] org.cytoscape.editor-impl ......................... SUCCESS [4.092s] [INFO] org.cytoscape.equations-functions-impl ............ SUCCESS [5.133s] [INFO] org.cytoscape.event-impl-it ....................... SUCCESS [6.876s] [INFO] org.cytoscape.filter-impl [org.cytoscape.filter.internal] SUCCESS [6.621s] [INFO] GraphML Reader and Writer for Cytoscape 3 ......... SUCCESS [6.523s] [INFO] org.cytoscape.group-data-impl [org.cytoscape.group.data.internal] SUCCESS [3.016s] [INFO] org.cytoscape.group-view-impl [org.cytoscape.group.view.internal] SUCCESS [5.094s] [INFO] org.cytoscape.io-impl-performance ................. SUCCESS [18.800s] [INFO] org.cytoscape.layout-cytoscape-impl [csapps.layout] SUCCESS [5.285s] [INFO] org.cytoscape.layout-jgraph-impl [csapps.layout] .. SUCCESS [3.755s] [INFO] org.cytoscape.layout-prefuse-impl [org.cytoscape.prefuse.layouts.internal] SUCCESS [4.694s] [INFO] org.cytoscape.linkout-impl [org.cytoscape.linkout.internal] SUCCESS [3.812s] [INFO] org.cytoscape.log-swing-impl [org.cytoscape.log.internal] SUCCESS [8.496s] [INFO] Manual Layout ..................................... SUCCESS [5.183s] [INFO] NetworkAnalyzer ................................... SUCCESS [6.641s] [INFO] CyMerge ........................................... SUCCESS [5.510s] [INFO] org.cytoscape.app-impl ............................ SUCCESS [6.805s] [INFO] org.cytoscape.presentation-impl [org.cytoscape.view.presentation.internal] SUCCESS [7.016s] [INFO] org.cytoscape.property.internal ................... SUCCESS [4.774s] [INFO] psi-mi-impl-parent ................................ SUCCESS [0.528s] [INFO] org.cytoscape.psi-mi-impl [org.cytoscape.psi_mi.internal] SUCCESS [21.055s] [INFO] org.cytoscape.psi-mi-impl-performance ............. SUCCESS [45.880s] [INFO] org.cytoscape.sbml-impl [org.cytoscape.sbml.internal] SUCCESS [7.611s] [INFO] org.cytoscape.search-impl [org.cytoscape.search.internal] SUCCESS [5.350s] [INFO] org.cytoscape.session-impl ........................ SUCCESS [3.954s] [INFO] Cytoscape Swing Application Impl .................. SUCCESS [19.668s] [INFO] Cytoscape Table Browser Implementation ............ SUCCESS [4.965s] [INFO] org.cytoscape.table-import-impl [org.cytoscape.tableimport.internal] SUCCESS [17.573s] [INFO] org.cytoscape.vizmap-gui-impl ..................... SUCCESS [8.933s] [INFO] vizmap-impl-parent ................................ SUCCESS [0.554s] [INFO] org.cytoscape.view.vizmap-impl .................... SUCCESS [8.379s] [INFO] org.cytoscape.io.webservice-biomart-client-impl [org.cytoscape.io.webservice.biomart] SUCCESS [6.294s] [INFO] org.cytoscape.webservice-impl [org.cytoscape.webservice.internal] SUCCESS [6.665s] [INFO] org.cytoscape.webservice-ncbi-client-impl [org.cytoscape.webservice.ncbi] SUCCESS [7.897s] [INFO] work-swing-impl-parent ............................ SUCCESS [0.375s] [INFO] org.cytoscape.work-swing-impl ..................... FAILURE [1.284s] [INFO] org.cytoscape.application-impl .................... SKIPPED [INFO] org.cytoscape.webservice-psicquic-client-impl [org.cytoscape.webservice.psicquic] SKIPPED [INFO] datasource-impl ................................... SKIPPED [INFO] datasource-biogrid-impl ........................... SKIPPED [INFO] org.cytoscape.welcome-impl [org.cytoscape.welcome.internal] SKIPPED [INFO] org.cytoscape.gui-cmdline-parser-impl [org.cytoscape.cmdline.gui.internal] SKIPPED [INFO] org.cytoscape.scripting-impl [org.cytoscape.scripting.internal] SKIPPED [INFO] ------------------------------------------------------------------------ [INFO] BUILD FAILURE [INFO] ------------------------------------------------------------------------ [INFO] Total time: 12:20.119s [INFO] Finished at: Fri Mar 23 14:51:29 GMT-05:00 2012 [INFO] Final Memory: 138M/348M [INFO] ------------------------------------------------------------------------ mavenExecutionResult exceptions not empty message : Failed to execute goal org.apache.maven.plugins:maven-compiler-plugin:2.3.2:compile (default-compile) on project work-swing-impl: Compilation failure cause : Compilation failure Stack trace : org.apache.maven.lifecycle.LifecycleExecutionException: Failed to execute goal org.apache.maven.plugins:maven-compiler-plugin:2.3.2:compile (default-compile) on project work-swing-impl: Compilation failure at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:213) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:153) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:145) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:84) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:59) at org.apache.maven.lifecycle.internal.LifecycleStarter.singleThreadedBuild(LifecycleStarter.java:183) at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:161) at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:319) at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:156) at org.jvnet.hudson.maven3.launcher.Maven3Launcher.main(Maven3Launcher.java:79) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:616) at org.codehaus.plexus.classworlds.launcher.Launcher.launchStandard(Launcher.java:329) at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:239) at org.jvnet.hudson.maven3.agent.Maven3Main.launch(Maven3Main.java:158) at hudson.maven.Maven3Builder.call(Maven3Builder.java:112) at hudson.maven.Maven3Builder.call(Maven3Builder.java:70) at hudson.remoting.UserRequest.perform(UserRequest.java:118) at hudson.remoting.UserRequest.perform(UserRequest.java:48) at hudson.remoting.Request$2.run(Request.java:287) at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471) at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:334) at java.util.concurrent.FutureTask.run(FutureTask.java:166) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1110) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603) at java.lang.Thread.run(Thread.java:636) Caused by: org.apache.maven.plugin.CompilationFailureException: Compilation failure at org.apache.maven.plugin.AbstractCompilerMojo.execute(AbstractCompilerMojo.java:656) at org.apache.maven.plugin.CompilerMojo.execute(CompilerMojo.java:128) at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:101) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:209) ... 27 more Sending e-mails to: [email protected] channel stopped -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. 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